NMR Restraints Grid |
Result table
image | mrblock_id | pdb_id | bmrb_id | cing | stage | program | type | subtype | subsubtype |
624783 | 5o7j | 26840 | cing | 4-filtered-FRED | Wattos | check | completeness | distance |
data_5o7j save_NOE_Completeness _NOE_completeness_stats.Sf_category NOE_completeness_statistics _NOE_completeness_stats.Model_count 20 _NOE_completeness_stats.Residue_count 150 _NOE_completeness_stats.Total_atom_count 2270 _NOE_completeness_stats.Observable_atom_definition ob_standard _NOE_completeness_stats.Observable_atom_count 798 _NOE_completeness_stats.Use_intra_residue_restraints no _NOE_completeness_stats.Redundancy_threshold_pct 5.0 _NOE_completeness_stats.Distance_averaging_power 1.00 _NOE_completeness_stats.Completeness_cutoff 4.00 _NOE_completeness_stats.Completeness_cumulative_pct 22.2 _NOE_completeness_stats.Constraint_unexpanded_count 1150 _NOE_completeness_stats.Constraint_count 1150 _NOE_completeness_stats.Constraint_exp_unfiltered_count 1808 _NOE_completeness_stats.Constraint_exceptional_count 0 _NOE_completeness_stats.Constraint_nonobservable_count 1 _NOE_completeness_stats.Constraint_intraresidue_count 202 _NOE_completeness_stats.Constraint_surplus_count 9 _NOE_completeness_stats.Constraint_observed_count 938 _NOE_completeness_stats.Constraint_expected_count 1801 _NOE_completeness_stats.Constraint_matched_count 399 _NOE_completeness_stats.Constraint_unmatched_count 539 _NOE_completeness_stats.Constraint_exp_nonobs_count 1402 _NOE_completeness_stats.Details ; A detailed methodology description is available at: http://nmr.cmbi.ru.nl/~jd/wattos/doc/Wattos/Soup/Constraint/dc_completeness.html Please note that the contributions in ambiguous restraints are considered separate 'restraints' for the sets defined below. The cut off for all statistics except those in the by-shell table is given below by the above tag: _NOE_completeness_stats.Completeness_cutoff Description of the tags in this list: * 1 * Administrative tag * 2 * Administrative tag * 3 * Administrative tag * 4 * Number of models * 5 * Number of residues * 6 * Number of atoms * 7 * Standard set name of observable atom definitions see: Doreleijers et al., J.Biomol.NMR 14, 123-132 (1999). * 8 * Observable atom(group)s * 9 * Include intra residue restraints * 10 * Surplus threshold for determining redundant restraints * 11 * Power for averaging the distance over models * 12 * Up to what distance are NOEs expected * 13 * Cumulative completeness percentage * 14 * Number of unexpanded restraints in restraint list. * 15 * Number of restraints in restraint list. Set U * 16 * Expected restraints based on criteria in list. Set V Set V differs from set B only if intra residue restraints are analyzed. * 17 * Exceptional restraints, i.e. with an unknown atom.Set E * 18 * Not observable NOEs with e.g. hydroxyl Ser HG. Set O Even though restraints with these atom types might have been observed they are excluded from the analysis. * 19 * Intra-residue restraints if not to be analyzed. Set I * 20 * Surplus like double restraints. Set S * 21 * Observed restraints. Set A = U - (E u O u I u S) * 22 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 23 * Observed restraints matched to the expected. Set M = A n B * 24 * Observed restraints that were not expected. Set C = A - M * 25 * Expected restraints that were not observed. Set D = B - M * 26 * This tag Description of the tags in the class table: * 1 * Class of restraint. Note that 'medium-range' involves (2<=i<=4) contacts. Possible values are: intraresidue,sequential,medium-range,long-range, and intermolecular. * 2 * Observed restraints. Set A = U - (E u O u I u S) * 3 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 4 * Observed restraints matched to the expected. Set M = A n B * 5 * Completeness percentage * 6 * Standard deviation from the average over the classes. * 7 * Extra information * 8 * Administrative tag * 9 * Administrative tag Description of the tags in the shell table. The first row shows the lower limit of the shells requested and The last row shows the total number of restraints over the shells. * 1 * Description of the content of the row: edges, shell, or sums. The value determines the meaning of the values to the nine 'Matched_shell_x' tags among others. * 2 * Lower limit of shell of expected restraints. * 3 * Upper limit of shell of expected restraints. * 4 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 5 * Observed restraints matched to the expected. Set M = A n B * 6 * Matched restraints with experimental distance in shell 1 * 7 * Matched restraints with experimental distance in shell 2 * 8 * Matched restraints with experimental distance in shell 3 * 9 * Matched restraints with experimental distance in shell 4 * 10 * Matched restraints with experimental distance in shell 5 * 11 * Matched restraints with experimental distance in shell 6 * 12 * Matched restraints with experimental distance in shell 7 * 13 * Matched restraints with experimental distance in shell 8 * 14 * Matched restraints with experimental distance in shell 9 * 15 * Matched restraints overflowing the last shell * 16 * Completeness percentage for this shell * 17 * Completeness percentage up to upper limit of this shell * 18 * Administrative tag * 19 * Administrative tag Description of the tags in the residue table: * 1 * Chain identifier * 2 * Residue number * 3 * Residue name * 4 * Observable atom(group)s for this residue. * 5 * Observed restraints. Set A = U - (E u O u I u S) * 6 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 7 * Observed restraints matched to the expected. Set M = A n B * 8 * Completeness percentage * 9 * Standard deviation from the average over the residues. * 10 * Extra information * 11 * Administrative tag * 12 * Administrative tag ; loop_ _NOE_completeness_class.Type _NOE_completeness_class.Constraint_observed_count _NOE_completeness_class.Constraint_expected_count _NOE_completeness_class.Constraint_matched_count _NOE_completeness_class.Completeness_cumulative_pct _NOE_completeness_class.Std_dev _NOE_completeness_class.Details intraresidue 0 0 0 . . "no intras" sequential 310 643 149 23.2 1.0 . medium-range 250 434 95 21.9 -0.3 . long-range 378 724 155 21.4 -0.7 . intermolecular 0 0 0 . . "no multimer" stop_ loop_ _NOE_completeness_shell.Type _NOE_completeness_shell.Shell_start _NOE_completeness_shell.Shell_end _NOE_completeness_shell.Constraint_expected_count _NOE_completeness_shell.Constraint_matched_count _NOE_completeness_shell.Matched_shell_1 _NOE_completeness_shell.Matched_shell_2 _NOE_completeness_shell.Matched_shell_3 _NOE_completeness_shell.Matched_shell_4 _NOE_completeness_shell.Matched_shell_5 _NOE_completeness_shell.Matched_shell_6 _NOE_completeness_shell.Matched_shell_7 _NOE_completeness_shell.Matched_shell_8 _NOE_completeness_shell.Matched_shell_9 _NOE_completeness_shell.Matched_shell_overflow _NOE_completeness_shell.Completeness_shell_pct _NOE_completeness_shell.Completeness_cumulative_pct edges . . . . 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 . . . . shell 0.00 2.00 5 4 0 2 2 0 0 0 0 0 . 0 80.0 80.0 shell 2.00 2.50 207 62 3 11 18 20 9 1 0 0 . 0 30.0 31.1 shell 2.50 3.00 346 94 3 7 25 33 16 8 1 1 . 0 27.2 28.7 shell 3.00 3.50 448 99 0 3 20 43 23 7 0 3 . 0 22.1 25.7 shell 3.50 4.00 795 140 0 0 12 39 53 23 6 7 . 0 17.6 22.2 shell 4.00 4.50 1150 176 0 0 3 23 57 38 24 31 . 0 15.3 19.5 shell 4.50 5.00 1672 168 0 0 1 3 22 71 31 40 . 0 10.0 16.1 shell 5.00 5.50 1967 99 0 0 0 0 1 23 26 49 . 0 5.0 12.8 shell 5.50 6.00 2294 70 0 0 0 0 0 1 16 53 . 0 3.1 10.3 shell 6.00 6.50 2551 24 0 0 0 0 0 0 6 18 . 0 0.9 8.2 shell 6.50 7.00 2968 2 0 0 0 0 0 0 0 2 . 0 0.1 6.5 shell 7.00 7.50 3278 0 0 0 0 0 0 0 0 0 . 0 0.0 5.3 shell 7.50 8.00 3617 0 0 0 0 0 0 0 0 0 . 0 0.0 4.4 shell 8.00 8.50 3957 0 0 0 0 0 0 0 0 0 . 0 0.0 3.7 shell 8.50 9.00 4184 0 0 0 0 0 0 0 0 0 . 0 0.0 3.2 sums . . 29439 938 6 23 81 161 181 172 110 204 . 0 . . stop_ loop_ _NOE_completeness_comp.Entity_assembly_ID _NOE_completeness_comp.Comp_index_ID _NOE_completeness_comp.Comp_ID _NOE_completeness_comp.Obs_atom_count _NOE_completeness_comp.Constraint_observed_count _NOE_completeness_comp.Constraint_expected_count _NOE_completeness_comp.Constraint_matched_count _NOE_completeness_comp.Completeness_cumulative_pct _NOE_completeness_comp.Std_dev _NOE_completeness_comp.Details 1 1 MET 6 0 2 0 0.0 -1.2 >sigma 1 2 GLY 3 0 14 0 0.0 -1.2 >sigma 1 3 HIS 6 0 9 0 0.0 -1.2 >sigma 1 4 HIS 6 0 8 0 0.0 -1.2 >sigma 1 5 HIS 6 0 7 0 0.0 -1.2 >sigma 1 6 HIS 6 0 7 0 0.0 -1.2 >sigma 1 7 HIS 6 0 8 0 0.0 -1.2 >sigma 1 8 HIS 6 0 6 0 0.0 -1.2 >sigma 1 9 SER 4 0 6 0 0.0 -1.2 >sigma 1 10 SER 4 0 7 0 0.0 -1.2 >sigma 1 11 GLY 3 0 6 0 0.0 -1.2 >sigma 1 12 VAL 5 0 28 0 0.0 -1.2 >sigma 1 13 ASP 4 0 13 0 0.0 -1.2 >sigma 1 14 LEU 7 0 26 0 0.0 -1.2 >sigma 1 15 GLY 3 0 15 0 0.0 -1.2 >sigma 1 16 THR 4 0 19 0 0.0 -1.2 >sigma 1 17 GLU 5 0 31 0 0.0 -1.2 >sigma 1 18 ASN 6 0 22 0 0.0 -1.2 >sigma 1 19 LEU 7 0 13 0 0.0 -1.2 >sigma 1 20 TYR 6 0 14 0 0.0 -1.2 >sigma 1 21 PHE 7 0 23 0 0.0 -1.2 >sigma 1 22 GLN 7 0 12 0 0.0 -1.2 >sigma 1 23 SER 4 0 13 0 0.0 -1.2 >sigma 1 24 MET 6 2 28 0 0.0 -1.2 >sigma 1 25 ARG 7 5 40 0 0.0 -1.2 >sigma 1 26 ALA 3 3 20 1 5.0 -0.9 . 1 27 GLN 7 19 58 8 13.8 -0.4 . 1 28 LEU 7 17 36 7 19.4 0.0 . 1 29 ILE 6 27 41 12 29.3 0.7 . 1 30 GLU 5 12 23 6 26.1 0.4 . 1 31 ARG 7 18 59 10 16.9 -0.1 . 1 32 GLY 3 15 23 8 34.8 1.0 >sigma 1 33 GLN 7 28 36 10 27.8 0.6 . 1 34 LEU 7 8 16 3 18.8 -0.0 . 1 35 ILE 6 18 38 7 18.4 -0.0 . 1 36 ALA 3 11 22 3 13.6 -0.4 . 1 37 GLU 5 10 23 4 17.4 -0.1 . 1 38 GLN 7 18 28 7 25.0 0.4 . 1 39 LEU 7 3 13 1 7.7 -0.7 . 1 40 ALA 3 2 25 0 0.0 -1.2 >sigma 1 41 PRO 5 8 23 3 13.0 -0.4 . 1 42 LEU 7 18 48 8 16.7 -0.2 . 1 43 ALA 3 26 38 19 50.0 2.0 >sigma 1 44 ALA 3 16 20 9 45.0 1.7 >sigma 1 45 THR 4 15 28 7 25.0 0.4 . 1 46 ALA 3 31 41 21 51.2 2.1 >sigma 1 47 LEU 7 36 46 15 32.6 0.9 . 1 48 ALA 3 19 14 7 50.0 2.0 >sigma 1 49 ARG 7 16 30 9 30.0 0.7 . 1 50 LYS 7 29 38 10 26.3 0.5 . 1 51 ASP 4 33 29 15 51.7 2.1 >sigma 1 52 THR 4 26 41 12 29.3 0.7 . 1 53 ALA 3 16 28 9 32.1 0.8 . 1 54 VAL 5 38 55 16 29.1 0.6 . 1 55 LEU 7 56 64 25 39.1 1.3 >sigma 1 56 ASN 6 32 38 11 28.9 0.6 . 1 57 ARG 7 38 51 16 31.4 0.8 . 1 58 ILE 6 37 64 15 23.4 0.3 . 1 59 ALA 3 33 37 12 32.4 0.9 . 1 60 ASN 6 20 22 5 22.7 0.2 . 1 61 GLU 5 19 29 5 17.2 -0.1 . 1 62 ALA 3 22 27 11 40.7 1.4 >sigma 1 63 LEU 7 36 61 13 21.3 0.1 . 1 64 ASP 4 15 18 7 38.9 1.3 >sigma 1 65 GLN 7 24 29 13 44.8 1.7 >sigma 1 66 PRO 5 9 18 5 27.8 0.6 . 1 67 ASP 4 13 17 7 41.2 1.4 >sigma 1 68 VAL 5 28 48 10 20.8 0.1 . 1 69 ARG 7 18 27 5 18.5 -0.0 . 1 70 ALA 3 12 30 3 10.0 -0.6 . 1 71 VAL 5 21 51 11 21.6 0.2 . 1 72 THR 4 29 43 17 39.5 1.3 >sigma 1 73 PHE 7 62 61 23 37.7 1.2 >sigma 1 74 LEU 7 44 62 23 37.1 1.2 >sigma 1 75 ASP 4 16 29 5 17.2 -0.1 . 1 76 ALA 3 17 19 7 36.8 1.1 >sigma 1 77 ARG 7 10 13 5 38.5 1.3 >sigma 1 78 GLN 7 13 15 6 40.0 1.4 >sigma 1 79 GLU 5 26 30 10 33.3 0.9 . 1 80 ARG 7 32 67 15 22.4 0.2 . 1 81 LEU 7 27 43 9 20.9 0.1 . 1 82 ALA 3 23 28 8 28.6 0.6 . 1 83 HIS 6 29 46 15 32.6 0.9 . 1 84 ALA 3 38 33 14 42.4 1.5 >sigma 1 85 GLY 3 13 16 3 18.8 -0.0 . 1 86 PRO 5 2 10 1 10.0 -0.6 . 1 87 SER 4 3 12 2 16.7 -0.2 . 1 88 MET 6 6 34 2 5.9 -0.9 . 1 89 LEU 7 19 40 9 22.5 0.2 . 1 90 THR 4 9 10 5 50.0 2.0 >sigma 1 91 VAL 5 8 15 5 33.3 0.9 . 1 92 ALA 3 9 18 4 22.2 0.2 . 1 93 PRO 5 3 11 1 9.1 -0.7 . 1 94 ALA 3 5 12 3 25.0 0.4 . 1 95 GLY 3 5 7 4 57.1 2.5 >sigma 1 96 ASP 4 4 19 2 10.5 -0.6 . 1 97 ALA 3 9 15 2 13.3 -0.4 . 1 98 SER 4 2 9 1 11.1 -0.5 . 1 99 HIS 6 1 14 1 7.1 -0.8 . 1 100 LEU 7 6 21 1 4.8 -0.9 . 1 101 SER 4 3 9 0 0.0 -1.2 >sigma 1 102 MET 6 3 6 0 0.0 -1.2 >sigma 1 103 SER 4 2 8 0 0.0 -1.2 >sigma 1 104 THR 4 3 7 0 0.0 -1.2 >sigma 1 105 GLU 5 6 11 0 0.0 -1.2 >sigma 1 106 LEU 7 7 22 3 13.6 -0.4 . 1 107 ASP 4 3 11 1 9.1 -0.7 . 1 108 THR 4 4 9 2 22.2 0.2 . 1 109 THR 4 13 20 8 40.0 1.4 >sigma 1 110 HIS 6 18 29 10 34.5 1.0 . 1 111 PHE 7 4 13 2 15.4 -0.2 . 1 112 LEU 7 1 9 1 11.1 -0.5 . 1 113 LEU 7 5 15 2 13.3 -0.4 . 1 114 PRO 5 1 13 1 7.7 -0.7 . 1 115 VAL 5 4 13 2 15.4 -0.2 . 1 116 LEU 7 6 21 3 14.3 -0.3 . 1 117 GLY 3 12 15 5 33.3 0.9 . 1 118 ARG 7 5 17 0 0.0 -1.2 >sigma 1 119 HIS 6 2 6 0 0.0 -1.2 >sigma 1 120 HIS 6 1 7 0 0.0 -1.2 >sigma 1 121 SER 4 2 7 2 28.6 0.6 . 1 122 LEU 7 7 11 4 36.4 1.1 >sigma 1 123 SER 4 6 11 2 18.2 -0.1 . 1 124 GLY 3 11 16 1 6.3 -0.8 . 1 125 ALA 3 17 28 9 32.1 0.8 . 1 126 THR 4 11 9 4 44.4 1.6 >sigma 1 127 GLU 5 11 17 3 17.6 -0.1 . 1 128 PRO 5 4 20 3 15.0 -0.3 . 1 129 ASP 4 1 18 0 0.0 -1.2 >sigma 1 130 ASP 4 3 13 0 0.0 -1.2 >sigma 1 131 GLU 5 8 23 2 8.7 -0.7 . 1 132 ARG 7 15 42 9 21.4 0.1 . 1 133 VAL 5 40 44 17 38.6 1.3 >sigma 1 134 LEU 7 18 29 10 34.5 1.0 . 1 135 GLY 3 15 17 3 17.6 -0.1 . 1 136 TRP 10 27 52 9 17.3 -0.1 . 1 137 VAL 5 27 50 9 18.0 -0.1 . 1 138 GLU 5 19 24 6 25.0 0.4 . 1 139 LEU 7 5 34 3 8.8 -0.7 . 1 140 GLU 5 8 24 1 4.2 -1.0 . 1 141 LEU 7 18 41 6 14.6 -0.3 . 1 142 SER 4 3 12 1 8.3 -0.7 . 1 143 HIS 6 2 7 1 14.3 -0.3 . 1 144 HIS 6 9 29 7 24.1 0.3 . 1 145 GLY 3 3 8 3 37.5 1.2 >sigma 1 146 THR 4 5 9 4 44.4 1.6 >sigma 1 147 LEU 7 3 7 2 28.6 0.6 . 1 148 LEU 7 9 15 4 26.7 0.5 . 1 149 ARG 7 12 15 6 40.0 1.4 >sigma 1 150 GLY 3 8 9 3 33.3 0.9 . stop_ save_
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