NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
592034 2mq9 25020 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2mq9


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        98
    _Stereo_assign_list.Swap_count           2
    _Stereo_assign_list.Swap_percentage      2.0
    _Stereo_assign_list.Deassign_count       6
    _Stereo_assign_list.Deassign_percentage  6.1
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   29.489
    _Stereo_assign_list.Total_e_high_states  122.583
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   6 SER QB 44 no  100.0   0.0  0.000  0.000  0.000  4  0 no  0.000  0  0 
       1  10 ARG QG 93 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1  11 ASN QD 43 no  100.0   0.0  0.000  0.000  0.000  4  0 no  0.006  0  0 
       1  12 VAL QG 92 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1  15 TRP QB 91 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1  16 LYS QG 90 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1  18 LYS QB 89 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1  19 LYS QB 42 no   20.0  95.3  0.064  0.067  0.003  4  0 no  0.149  0  0 
       1  20 LEU QB 41 no  100.0   0.0  0.000  0.004  0.004  4  0 no  0.133  0  0 
       1  25 GLU QB 88 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1  25 GLU QG 13 no  100.0   0.0  0.000  0.000  0.000  6  0 no  0.007  0  0 
       1  29 GLY QA 98 no  100.0   0.0  0.000  0.000  0.000  1  0 no  0.000  0  0 
       1  31 GLY QA 95 no   80.0  98.2  0.067  0.068  0.001  2  2 no  0.077  0  0 
       1  34 MET QB 18 no   65.0  72.5  0.850  1.171  0.322  5  2 no  0.112  0  0 
       1  34 MET QG 87 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1  35 ILE QG 40 no   45.0  99.5  0.411  0.413  0.002  4  0 no  0.174  0  0 
       1  43 ASP QB 86 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.015  0  0 
       1  44 GLN QB 85 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1  46 SER QB 84 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1  47 ARG QB 39 no  100.0   0.0  0.000  0.000  0.000  4  0 no  0.000  0  0 
       1  48 VAL QG 83 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1  50 LYS QG 38 no   55.0  99.0  0.031  0.031  0.000  4  0 no  0.040  0  0 
       1  51 MET QB  7 no  100.0   0.0  0.000  0.001  0.001  8  2 no  0.087  0  0 
       1  52 LEU QB 82 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1  54 ASP QB 14 no  100.0 100.0  0.995  0.995  0.000  5  0 no  0.028  0  0 
       1  55 GLN QB 81 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1  55 GLN QG 53 no   95.0  99.9  0.746  0.747  0.001  3  2 no  0.087  0  0 
       1  56 PHE QB 37 no  100.0   0.0  0.000  0.000  0.000  4  0 no  0.000  0  0 
       1  56 PHE QD 80 no   25.0 100.0  0.005  0.005  0.000  2  0 no  0.000  0  0 
       1  60 SER QB 36 no   50.0 100.0  0.034  0.034  0.000  4  0 no  0.006  0  0 
       1  61 ASN QB 35 no  100.0   0.0  0.000  0.000  0.000  4  0 no  0.000  0  0 
       1  62 ILE QG 79 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1  63 LYS QG 78 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1  64 SER QB 77 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.026  0  0 
       1  65 ARG QG 76 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1  66 VAL QG 34 no  100.0   0.0  0.000  0.000  0.000  4  0 no  0.000  0  0 
       1  67 ASN QB  6 no   85.0  99.8  0.766  0.767  0.001  8  2 no  0.077  0  0 
       1  67 ASN QD 75 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1  69 LEU QB 33 no  100.0   0.0  0.000  0.000  0.000  4  0 no  0.000  0  0 
       1  69 LEU QD 74 no   80.0 100.0  0.049  0.049  0.000  2  0 no  0.000  0  0 
       1  70 SER QB 32 no  100.0   0.0  0.000  0.000  0.000  4  0 no  0.000  0  0 
       1  72 LEU QB 31 no  100.0   0.0  0.000  0.000  0.000  4  0 no  0.093  0  0 
       1  79 GLN QB 73 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1  79 GLN QG 72 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1  80 GLN QB 30 no  100.0   0.0  0.000  0.000  0.000  4  0 no  0.000  0  0 
       1  80 GLN QG 29 no  100.0   0.0  0.000  0.000  0.000  4  0 no  0.000  0  0 
       1  81 ARG QB 28 no  100.0   0.0  0.000  0.002  0.002  4  0 no  0.127  0  0 
       1  81 ARG QG 52 no   30.0  64.2  0.064  0.100  0.036  3  1 no  0.371  0  0 
       1  82 LEU QB 27 no  100.0   0.0  0.000  0.000  0.000  4  0 no  0.000  0  0 
       1  83 LYS QG 71 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1  84 LEU QB  8 no  100.0   0.0  0.000  0.010  0.010  8  4 no  0.167  0  0 
       1  85 TYR QD  2 yes 100.0  99.9 21.195 21.222  0.026 11  7 no  0.230  0  0 
       1  85 TYR QE  3 yes 100.0 100.0 33.672 33.688  0.016 10 10 no  0.167  0  0 
       1  87 LYS QB 51 no  100.0  99.4  1.552  1.562  0.010  3  0 no  0.245  0  0 
       1  87 LYS QG 26 no  100.0   0.0  0.000  0.000  0.000  4  0 no  0.065  0  0 
       1  88 VAL QG 70 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1  93 LEU QB 17 no  100.0   1.0  0.000  0.010  0.010  5  2 no  0.335  0  0 
       1  93 LEU QD  1 no   50.0  10.2  1.272 12.415 11.143 20 13 no  0.246  0  0 
       1  95 VAL QG 12 no  100.0   0.0  0.000  0.011  0.011  6  0 no  0.207  0  0 
       1  96 TYR QD 46 no   65.0  42.8  4.247  9.917  5.670  4  2 yes 1.840  2  4 
       1  96 TYR QE 69 no   50.0  35.8  0.438  1.223  0.785  2  0 yes 2.041  9 12 
       1  97 CYS QB 68 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1  98 GLY QA 50 no  100.0   0.0  0.000  0.000  0.000  3  0 no  0.000  0  0 
       1 104 GLU QB 67 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1 106 LYS QB 25 no  100.0  98.4  0.035  0.036  0.001  4  0 no  0.079  0  0 
       1 106 LYS QG 66 no    0.0   0.0  0.000  0.009  0.009  2  0 no  0.249  0  0 
       1 107 GLU QB 11 no  100.0 100.0  0.000  0.000  0.000  6  0 no  0.063  0  0 
       1 107 GLU QG 65 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1 108 LYS QB 24 no    0.0   0.0  0.000  0.008  0.008  4  0 no  0.126  0  0 
       1 108 LYS QG 49 no   15.0 100.0  0.032  0.032  0.000  3  0 no  0.011  0  0 
       1 109 LYS QG 23 no  100.0  99.9  0.279  0.280  0.000  4  0 no  0.027  0  0 
       1 111 ASN QB 48 no    5.0 100.0  0.006  0.006  0.000  3  0 no  0.006  0  0 
       1 112 ILE QG 22 no   25.0  32.1  0.001  0.004  0.003  4  0 no  0.116  0  0 
       1 113 ASP QB  5 no  100.0  20.9  0.003  0.013  0.010  9  5 no  0.226  0  0 
       1 114 PHE QB 94 no  100.0   0.0  0.000  0.000  0.000  2  2 no  0.000  0  0 
       1 114 PHE QD 16 no  100.0  99.8  0.249  0.250  0.001  5  2 no  0.044  0  0 
       1 114 PHE QE 97 no  100.0 100.0  3.412  3.412  0.000  1  0 no  0.024  0  0 
       1 115 GLU QB  9 no   60.0  96.6  0.939  0.973  0.034  8  8 no  0.230  0  0 
       1 117 PHE QB 47 no   70.0  99.7  0.170  0.171  0.001  3  0 no  0.071  0  0 
       1 117 PHE QE 21 no  100.0 100.0 15.249 15.250  0.002  4  0 no  0.128  0  0 
       1 120 ILE QG 64 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.055  0  0 
       1 121 ASN QB 63 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1 121 ASN QD 62 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1 124 LEU QB 20 no  100.0   0.0  0.000  0.001  0.001  4  0 no  0.130  0  0 
       1 125 TYR QD 61 no   85.0  76.7  2.324  3.032  0.708  2  0 yes 2.665  2  2 
       1 125 TYR QE 60 no   55.0  64.7  1.201  1.857  0.655  2  0 yes 2.758  3  3 
       1 126 LEU QB 59 no  100.0 100.0  0.000  0.000  0.000  2  0 no  0.038  0  0 
       1 126 LEU QD 19 no  100.0   0.0  0.000  0.000  0.000  4  0 no  0.031  0  0 
       1 127 CYS QB 58 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1 128 ASP QB 10 no  100.0   0.0  0.000  0.000  0.000  6  0 no  0.022  0  0 
       1 129 ASN QB 57 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1 130 LYS QB 56 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1 130 LYS QG 55 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000  0  0 
       1 131 PHE QB 45 no  100.0   0.0  0.000  0.000  0.000  4  2 no  0.000  0  0 
       1 131 PHE QD  4 no   45.0   6.0  0.347  5.778  5.431  9  5 yes 3.849 13 13 
       1 131 PHE QE 15 no   55.0  14.1  0.752  5.324  4.572  5  1 yes 3.417 19 20 
       1 139 LEU QD 54 no   75.0 100.0  0.809  0.809  0.000  2  0 no  0.027  0  0 
       1 140 LEU QD 96 no   50.0 100.0  0.824  0.824  0.000  1  0 no  0.009  0  0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Sunday, May 19, 2024 2:44:43 PM GMT (wattos1)