NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
586773 2mw3 25297 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2mw3


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        28
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          15
    _Stereo_assign_list.Total_e_low_states   0.126
    _Stereo_assign_list.Total_e_high_states  14.561
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  1 SER QB  1 no 100.0  99.7 1.752 1.757 0.005 20 11 no 0.096 0 0 
       1  2 LEU QB 21 no 100.0   0.0 0.000 0.000 0.000  6  3 no 0.000 0 0 
       1  2 LEU QD 15 no 100.0  98.6 1.582 1.605 0.023  9  4 no 0.207 0 0 
       1  3 GLY QA  6 no 100.0  93.5 0.575 0.615 0.040 15  7 no 0.246 0 0 
       1  4 SER QB 22 no  93.3  99.5 0.506 0.509 0.003  5  0 no 0.140 0 0 
       1  5 SER QB  7 no  60.0  76.8 0.034 0.044 0.010 13  1 no 0.157 0 0 
       1  6 PRO QB 20 no  60.0  99.9 0.446 0.446 0.000  6  2 no 0.040 0 0 
       1  6 PRO QD 14 no 100.0   0.0 0.000 0.000 0.000 10  6 no 0.000 0 0 
       1  6 PRO QG 12 no  46.7  97.6 0.159 0.163 0.004 10  4 no 0.164 0 0 
       1  7 TYR QB  9 no 100.0   0.0 0.000 0.000 0.000 12  0 no 0.000 0 0 
       1  8 ASN QB  4 no  73.3  99.4 0.929 0.934 0.006 15  6 no 0.123 0 0 
       1  8 ASN QD 16 no  60.0 100.0 0.080 0.080 0.000  9  6 no 0.002 0 0 
       1  9 ASP QB  8 no 100.0  90.1 0.099 0.110 0.011 12  0 no 0.428 0 0 
       1 10 ILE QG 24 no  66.7 100.0 0.273 0.273 0.000  4  0 no 0.000 0 0 
       1 11 LEU QB  3 no 100.0 100.0 0.439 0.439 0.000 18  5 no 0.027 0 0 
       1 11 LEU QD 19 no  60.0 100.0 0.260 0.260 0.000  6  0 no 0.000 0 0 
       1 12 GLY QA 13 no 100.0  98.9 0.671 0.678 0.007 10  5 no 0.128 0 0 
       1 13 TYR QB  2 no 100.0 100.0 0.221 0.221 0.000 19  8 no 0.000 0 0 
       1 14 PRO QB 11 no  93.3  94.7 0.003 0.003 0.000 10  3 no 0.124 0 0 
       1 14 PRO QD  5 no  60.0 100.0 0.057 0.057 0.000 15  7 no 0.000 0 0 
       1 16 LEU QB 17 no 100.0 100.0 0.025 0.025 0.000  8  3 no 0.246 0 0 
       1 16 LEU QD 10 no 100.0  99.9 5.680 5.687 0.007 11  8 no 0.137 0 0 
       1 17 ILE QG 25 no  46.7 100.0 0.358 0.358 0.000  4  1 no 0.000 0 0 
       1 18 VAL QG 18 no 100.0   0.0 0.000 0.000 0.000  6  0 no 0.000 0 0 
       1 19 ILE QG 28 no  13.3  99.9 0.018 0.018 0.000  1  0 no 0.019 0 0 
       1 20 TYR QB 23 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 21 PRO QB 26 no  60.0  96.6 0.269 0.278 0.010  3  0 no 0.319 0 0 
       1 21 PRO QD 27 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Thursday, May 23, 2024 3:46:56 PM GMT (wattos1)