NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
572647 2mim 19687 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2mim


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        130
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          10
    _Stereo_assign_list.Total_e_low_states   0.637
    _Stereo_assign_list.Total_e_high_states  201.254
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   6 GLN QB 121 no  50.0  64.7  0.046  0.072 0.025  2  1 no 0.189 0 0 
       1   6 GLN QG  61 no  50.0  96.4  0.819  0.849 0.031  7  1 no 0.189 0 0 
       1   7 GLU QB 107 no 100.0   0.0  0.000  0.000 0.000  3  0 no 0.000 0 0 
       1   8 GLU QB 106 no 100.0 100.0  0.287  0.287 0.000  3  0 no 0.021 0 0 
       1   8 GLU QG 119 no  70.0 100.0  0.177  0.177 0.000  2  0 no 0.000 0 0 
       1  11 VAL QG  12 no 100.0 100.0  5.920  5.920 0.000 17  2 no 0.020 0 0 
       1  14 SER QB  46 no  80.0 100.0  0.056  0.056 0.000  9  0 no 0.002 0 0 
       1  15 GLY QA  86 no 100.0 100.0  0.009  0.009 0.000  5  0 no 0.183 0 0 
       1  18 VAL QG   4 no 100.0 100.0 14.172 14.174 0.002 33  2 no 0.079 0 0 
       1  22 CYS QB  13 no 100.0  98.5  0.461  0.468 0.007 17  3 no 0.108 0 0 
       1  23 PRO QB 105 no 100.0 100.0  0.165  0.165 0.000  3  0 no 0.020 0 0 
       1  23 PRO QG 129 no 100.0   0.0  0.000  0.000 0.000  1  0 no 0.000 0 0 
       1  24 SER QB  29 no  20.0  94.4  0.022  0.024 0.001 12  2 no 0.062 0 0 
       1  26 GLY QA  85 no 100.0 100.0  0.788  0.788 0.000  5  0 no 0.000 0 0 
       1  28 ASP QB 118 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  29 ILE QG  25 no  30.0  34.1  0.001  0.003 0.002 14  5 no 0.062 0 0 
       1  30 LYS QB  45 no 100.0  99.9  1.110  1.111 0.001  9  0 no 0.041 0 0 
       1  30 LYS QD  84 no 100.0  99.9  0.097  0.097 0.000  5  0 no 0.012 0 0 
       1  30 LYS QG  74 no  60.0  98.7  0.020  0.021 0.000  6  0 no 0.026 0 0 
       1  31 TRP QB  20 no 100.0  99.9  0.330  0.331 0.000 15  3 no 0.027 0 0 
       1  32 LYS QB  79 no 100.0 100.0  3.642  3.643 0.001  6  3 no 0.068 0 0 
       1  32 LYS QD 128 no 100.0   0.0  0.000  0.000 0.000  1  0 no 0.000 0 0 
       1  33 PRO QB 122 no  40.0  96.0  0.010  0.010 0.000  2  2 no 0.036 0 0 
       1  33 PRO QD  50 no  40.0  99.8  0.012  0.012 0.000  9  4 no 0.010 0 0 
       1  33 PRO QG 109 no 100.0   0.0  0.000  0.000 0.000  3  1 no 0.000 0 0 
       1  34 ASP QB  18 no 100.0  99.8  0.475  0.476 0.001 16  7 no 0.051 0 0 
       1  35 PRO QB  76 no 100.0 100.0  3.734  3.734 0.000  6  1 no 0.027 0 0 
       1  35 PRO QD  35 no  80.0  41.2  0.010  0.024 0.014 11  4 no 0.128 0 0 
       1  35 PRO QG  59 no 100.0  98.7  0.335  0.340 0.004  7  0 no 0.078 0 0 
       1  37 LEU QD  19 no 100.0  99.9  2.970  2.973 0.003 15  2 no 0.085 0 0 
       1  38 GLY QA  47 no 100.0 100.0  0.004  0.004 0.000  9  1 no 0.061 0 0 
       1  39 ASP QB  41 no  60.0 100.0  0.126  0.126 0.000 10  4 no 0.000 0 0 
       1  41 ASN QB  98 no  60.0  96.6  0.067  0.069 0.002  4  0 no 0.106 0 0 
       1  42 LYS QB  24 no 100.0  99.9  2.145  2.147 0.002 14  5 no 0.079 0 0 
       1  42 LYS QG  90 no 100.0 100.0  1.726  1.726 0.000  5  1 no 0.029 0 0 
       1  43 TYR QB  73 no 100.0 100.0  0.011  0.011 0.000  6  0 no 0.132 0 0 
       1  44 ILE QG  34 no 100.0  98.7  0.022  0.023 0.000 11  4 no 0.029 0 0 
       1  45 ILE QG  32 no 100.0  99.7  0.794  0.796 0.002 11  0 no 0.074 0 0 
       1  46 GLN QB  44 no 100.0  95.6  0.142  0.148 0.006  9  0 no 0.115 0 0 
       1  46 GLN QG  31 no 100.0  96.3  0.152  0.158 0.006 11  0 no 0.083 0 0 
       1  49 ASP QB 117 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  52 PRO QB  89 no  10.0  97.8  0.024  0.025 0.001  5  1 no 0.034 0 0 
       1  52 PRO QD 127 no 100.0   0.0  0.000  0.000 0.000  1  0 no 0.000 0 0 
       1  52 PRO QG  52 no 100.0  95.5  0.474  0.496 0.022  8  1 no 0.173 0 0 
       1  53 LEU QD   6 no 100.0  98.7  1.330  1.347 0.017 30  9 no 0.129 0 0 
       1  55 VAL QG  10 no 100.0 100.0 13.616 13.620 0.004 20  5 no 0.086 0 0 
       1  57 CYS QB 126 no  70.0  98.8  0.200  0.203 0.003  1  0 no 0.117 0 0 
       1  60 GLY QA  58 no 100.0 100.0  0.167  0.167 0.000  7  0 no 0.000 0 0 
       1  62 GLN QB  39 no 100.0 100.0  1.013  1.013 0.000 10  1 no 0.012 0 0 
       1  62 GLN QG  88 no 100.0 100.0  0.377  0.377 0.000  5  1 no 0.007 0 0 
       1  63 GLU QB  97 no  90.0 100.0  0.790  0.790 0.000  4  0 no 0.022 0 0 
       1  64 HIS QB 116 no 100.0 100.0  0.000  0.000 0.000  2  0 no 0.007 0 0 
       1  66 MET QB  87 no 100.0   0.0  0.000  0.000 0.000  5  1 no 0.000 0 0 
       1  66 MET QG  78 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.000 0 0 
       1  67 TYR QB  38 no  90.0  99.8  0.119  0.119 0.000 11  9 no 0.034 0 0 
       1  68 LEU QB  55 no  70.0  37.4  0.018  0.049 0.031  8  5 no 0.237 0 0 
       1  68 LEU QD  14 no 100.0  98.8  0.198  0.200 0.002 17  5 no 0.129 0 0 
       1  69 ASN QB  60 no  90.0  87.8  0.198  0.226 0.028  7  1 no 0.279 0 0 
       1  76 ASP QB  51 no 100.0  98.5  0.305  0.309 0.005  8  0 no 0.110 0 0 
       1  99 VAL QG  72 no  90.0 100.0  0.289  0.289 0.000  6  0 no 0.016 0 0 
       1 101 LYS QG 125 no  20.0 100.0  0.000  0.000 0.000  1  0 no 0.000 0 0 
       1 102 LEU QD  27 no 100.0 100.0  1.609  1.609 0.000 13  0 no 0.034 0 0 
       1 107 LEU QB  96 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 109 MET QB 115 no  80.0  41.5  0.017  0.040 0.023  2  0 no 0.207 0 0 
       1 109 MET QG  57 no 100.0  98.8  0.962  0.974 0.012  7  0 no 0.164 0 0 
       1 111 VAL QG   8 no 100.0 100.0 14.362 14.365 0.003 25  7 no 0.078 0 0 
       1 112 LYS QB  17 no 100.0  96.3  0.161  0.167 0.006 16  6 no 0.098 0 0 
       1 113 GLU QB  65 no  90.0  75.8  0.003  0.004 0.001  7  3 no 0.058 0 0 
       1 113 GLU QG  16 no 100.0  99.9  2.056  2.058 0.002 17  9 no 0.044 0 0 
       1 114 VAL QG   7 no 100.0  99.9 18.711 18.730 0.019 28  9 no 0.143 0 0 
       1 115 SER QB  43 no 100.0  27.7  0.014  0.050 0.036 10  7 no 0.143 0 0 
       1 116 GLY QA  83 no 100.0  36.9  0.001  0.002 0.001  5  0 no 0.060 0 0 
       1 117 LYS QB  22 no 100.0  99.6  4.572  4.592 0.020 15  7 no 0.139 0 0 
       1 117 LYS QE  30 no 100.0  59.5  0.022  0.036 0.015 12  5 no 0.161 0 0 
       1 117 LYS QG 104 no 100.0 100.0  0.080  0.080 0.000  3  0 no 0.000 0 0 
       1 118 VAL QG   1 no 100.0 100.0  9.427  9.430 0.003 39  9 no 0.071 0 0 
       1 119 PHE QB  68 no 100.0  99.9  0.003  0.003 0.000  7  5 no 0.084 0 0 
       1 120 LEU QB  67 no  80.0  79.4  0.006  0.008 0.002  7  5 no 0.182 0 0 
       1 120 LEU QD  11 no  90.0  99.9  1.590  1.591 0.001 18  4 no 0.064 0 0 
       1 122 CYS QB  49 no  90.0  99.8  0.741  0.743 0.002  9  2 no 0.102 0 0 
       1 123 GLN QB  82 no 100.0  98.6  0.671  0.681 0.009  5  0 no 0.172 0 0 
       1 123 GLN QG  81 no  60.0  99.5  0.038  0.039 0.000  5  0 no 0.022 0 0 
       1 124 GLU QB 114 no  30.0 100.0  0.039  0.039 0.000  2  0 no 0.000 0 0 
       1 133 LEU QB  91 no 100.0 100.0  1.040  1.040 0.000  5  2 no 0.027 0 0 
       1 134 TRP QB  37 no 100.0  91.9  0.203  0.221 0.018 11  7 no 0.146 0 0 
       1 135 LYS QB  15 no 100.0  97.5  0.021  0.022 0.001 17  6 no 0.164 0 0 
       1 135 LYS QD  42 no 100.0 100.0  2.201  2.202 0.001 10  6 no 0.054 0 0 
       1 135 LYS QE  36 no 100.0  99.5  1.351  1.358 0.007 11  6 no 0.080 0 0 
       1 135 LYS QG  64 no 100.0  99.2  0.540  0.544 0.004  7  3 no 0.081 0 0 
       1 136 LYS QB 100 no  60.0 100.0  0.119  0.119 0.000  4  1 no 0.000 0 0 
       1 137 GLY QA 113 no  90.0  99.9  0.011  0.011 0.000  2  0 no 0.012 0 0 
       1 139 GLU QB  71 no 100.0 100.0  0.004  0.004 0.000  6  0 no 0.079 0 0 
       1 139 GLU QG  48 no 100.0  92.4  0.105  0.113 0.009  9  2 no 0.117 0 0 
       1 140 GLU QG  26 no 100.0  97.6  0.449  0.460 0.011 14  9 no 0.156 0 0 
       1 141 LEU QD   3 no 100.0  99.9 25.375 25.398 0.023 36 15 no 0.223 0 0 
       1 142 GLY QA 108 no 100.0   0.0  0.000  0.000 0.000  3  1 no 0.000 0 0 
       1 143 ASN QB  95 no  80.0 100.0  0.130  0.130 0.000  4  0 no 0.015 0 0 
       1 144 MET QB  70 no 100.0  99.2  0.052  0.053 0.000  6  0 no 0.031 0 0 
       1 144 MET QG  21 no 100.0  99.3  0.514  0.517 0.004 15  4 no 0.077 0 0 
       1 145 ARG QB 112 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 146 GLN QB  94 no  50.0 100.0  0.064  0.064 0.000  4  0 no 0.000 0 0 
       1 146 GLN QG 103 no  20.0 100.0  0.009  0.009 0.000  3  0 no 0.000 0 0 
       1 147 LEU QB  28 no 100.0  98.8  0.754  0.763 0.009 13  9 no 0.133 0 0 
       1 147 LEU QD   2 no 100.0 100.0  9.644  9.648 0.004 39 18 no 0.072 0 0 
       1 148 ASP QB  33 no 100.0 100.0  0.040  0.040 0.000 11  3 no 0.000 0 0 
       1 149 LEU QB  80 no 100.0 100.0  0.697  0.697 0.000  6  5 no 0.009 0 0 
       1 149 LEU QD   9 no 100.0  99.9  9.130  9.138 0.007 25 12 no 0.126 0 0 
       1 150 GLY QA  63 no 100.0 100.0  0.000  0.000 0.000  7  2 no 0.025 0 0 
       1 152 ILE QG  54 no 100.0  99.7  0.465  0.467 0.001  8  3 no 0.057 0 0 
       1 153 TYR QB  69 no 100.0  99.9  2.046  2.049 0.003  6  0 no 0.070 0 0 
       1 154 ASP QB  56 no 100.0   0.0  0.000  0.000 0.000  7  0 no 0.000 0 0 
       1 155 ASP QB 120 no 100.0  99.5  1.474  1.482 0.008  2  1 no 0.100 0 0 
       1 156 PRO QB  66 no 100.0  99.0  0.746  0.754 0.007  7  4 no 0.126 0 0 
       1 156 PRO QD 124 no 100.0 100.0  0.673  0.673 0.000  1  0 no 0.000 0 0 
       1 156 PRO QG  75 no 100.0  98.4  0.430  0.437 0.007  6  1 no 0.093 0 0 
       1 157 ARG QB 111 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 157 ARG QD 110 no  20.0 100.0  0.034  0.034 0.000  2  0 no 0.000 0 0 
       1 157 ARG QG  93 no  40.0 100.0  0.221  0.221 0.000  4  0 no 0.027 0 0 
       1 158 GLY QA 123 no  90.0  97.1  0.003  0.003 0.000  1  0 no 0.148 0 0 
       1 160 TYR QB  53 no 100.0  99.6  1.288  1.293 0.005  8  3 no 0.150 0 0 
       1 162 CYS QB  40 no 100.0  99.0  1.482  1.497 0.015 10  3 no 0.211 0 0 
       1 165 ASP QB 102 no 100.0 100.0  0.638  0.638 0.000  3  0 no 0.032 0 0 
       1 166 GLU QB  92 no  50.0  99.7  0.067  0.067 0.000  4  0 no 0.033 0 0 
       1 168 VAL QG  23 no 100.0  99.4  4.479  4.504 0.026 14  3 no 0.159 0 0 
       1 169 ASN QB  77 no 100.0  92.4  0.270  0.292 0.022  6  2 no 0.159 0 0 
       1 170 SER QB  62 no  20.0  99.5  0.003  0.003 0.000  7  2 no 0.011 0 0 
       1 172 LEU QB 130 no 100.0   0.0  0.000  0.000 0.000  1  1 no 0.000 0 0 
       1 172 LEU QD   5 no 100.0  99.9 18.228 18.250 0.022 32 10 no 0.141 0 0 
       1 173 HIS QB  99 no  90.0  90.2  0.047  0.053 0.005  4  1 no 0.219 0 0 
       1 176 TYR QB 101 no  90.0  93.5  0.506  0.541 0.035  3  0 no 0.236 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Wednesday, May 22, 2024 2:16:28 AM GMT (wattos1)