NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
571446 2m1x 18883 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2m1x


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        43
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.018
    _Stereo_assign_list.Total_e_high_states  48.423
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   7 GLN QE 43 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  13 VAL QG 10 no   0.0   0.0  0.000  0.001 0.001 14 2 no 0.071 0 0 
       1  15 LEU QD 25 no 100.0   0.0  0.000  0.000 0.000  8 2 no 0.000 0 0 
       1  25 LEU QD 20 no 100.0   0.0  0.000  0.001 0.001 10 4 no 0.051 0 0 
       1  27 VAL QG  1 no 100.0 100.0 10.890 10.890 0.000 31 1 no 0.026 0 0 
       1  31 LEU QD 15 no 100.0   0.0  0.000  0.000 0.000 12 2 no 0.014 0 0 
       1  34 LEU QD  6 no 100.0   0.0  0.000  0.001 0.001 20 4 no 0.060 0 0 
       1  35 GLY QA 40 no 100.0 100.0  0.409  0.409 0.000  4 0 no 0.033 0 0 
       1  36 VAL QG 16 no 100.0   0.0  0.000  0.000 0.000 12 4 no 0.018 0 0 
       1  39 GLY QA 39 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.000 0 0 
       1  48 VAL QG 24 no 100.0   0.0  0.000  0.000 0.000  8 0 no 0.026 0 0 
       1  52 GLY QA 42 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  54 LEU QD 19 no 100.0   0.0  0.000  0.000 0.000 10 2 no 0.088 0 0 
       1  57 LEU QD 23 no 100.0   0.0  0.000  0.001 0.001  8 0 no 0.161 0 0 
       1  58 GLN QE 41 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  69 LEU QD 38 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.007 0 0 
       1  70 LEU QD 32 no 100.0   0.0  0.000  0.000 0.000  6 2 no 0.009 0 0 
       1  71 LEU QD  9 no 100.0 100.0 10.589 10.589 0.000 16 2 no 0.019 0 0 
       1  74 ASN QD 34 no 100.0 100.0  0.544  0.544 0.000  5 0 no 0.000 0 0 
       1  79 LEU QD  3 no 100.0 100.0  2.946  2.946 0.000 21 8 no 0.074 0 0 
       1  81 LEU QD 29 no   0.0   0.0  0.000  0.001 0.001  6 0 no 0.088 0 0 
       1  83 GLN QE 33 no 100.0   0.0  0.000  0.000 0.000  6 4 no 0.026 0 0 
       1  84 VAL QG 13 no 100.0   0.0  0.000  0.000 0.000 12 0 no 0.026 0 0 
       1  85 ASN QD 12 no 100.0 100.0  0.617  0.617 0.000 12 0 no 0.012 0 0 
       1  86 GLN QE 37 no 100.0   0.0  0.000  0.001 0.001  4 0 no 0.128 0 0 
       1  91 ASN QD 36 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.007 0 0 
       1  92 LEU QD 18 no 100.0  99.9  1.697  1.698 0.001 10 2 no 0.049 0 0 
       1  95 GLN QE 28 no 100.0   0.0  0.000  0.000 0.000  6 0 no 0.012 0 0 
       1  96 GLY QA 35 no 100.0 100.0  0.279  0.279 0.000  4 0 no 0.019 0 0 
       1 101 VAL QG 22 no 100.0   0.0  0.000  0.000 0.000  8 0 no 0.018 0 0 
       1 105 LEU QD 17 no 100.0   0.0  0.000  0.000 0.000 10 0 no 0.051 0 0 
       1 107 LEU QD 11 no   0.0   0.0  0.000  0.004 0.004 14 4 no 0.114 0 0 
       1 113 GLN QE 31 no 100.0 100.0  2.535  2.535 0.000  6 2 no 0.001 0 0 
       1 114 LEU QD  5 no 100.0 100.0  6.951  6.951 0.000 20 2 no 0.010 0 0 
       1 121 LEU QD  2 no 100.0 100.0  8.511  8.511 0.000 21 4 no 0.043 0 0 
       1 122 LEU QD 14 no 100.0   0.0  0.000  0.000 0.000 12 2 no 0.005 0 0 
       1 125 LEU QD 30 no 100.0   0.0  0.000  0.000 0.000  6 2 no 0.000 0 0 
       1 126 VAL QG 21 no 100.0   0.0  0.000  0.000 0.000  8 0 no 0.007 0 0 
       1 128 LEU QD  8 no 100.0   0.0  0.000  0.000 0.000 16 2 no 0.026 0 0 
       1 139 VAL QG  4 no 100.0   0.0  0.000  0.004 0.004 20 0 no 0.105 0 0 
       1 141 ASN QD 26 no 100.0 100.0  0.979  0.979 0.000  7 2 no 0.023 0 0 
       1 148 LEU QD  7 no   0.0   0.0  0.000  0.000 0.000 18 6 no 0.046 0 0 
       1 149 GLN QE 27 no 100.0 100.0  1.460  1.461 0.000  6 0 no 0.044 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Sunday, May 19, 2024 2:15:38 PM GMT (wattos1)