NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
552751 2lnx 18183 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2lnx


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        78
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.026
    _Stereo_assign_list.Total_e_high_states  0.026
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  12 PRO QD 78 no 100.0 0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1  16 GLU QB 52 no 100.0 0.0 0.000 0.002 0.002  4 0 no 0.080 0 0 
       1  18 ASP QB 31 no 100.0 0.0 0.000 0.003 0.003  6 0 no 0.080 0 0 
       1  22 TYR QB 77 no 100.0 0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1  25 PHE QB 14 no 100.0 0.0 0.000 0.000 0.000  8 0 no 0.000 0 0 
       1  27 GLY QA 13 no   0.0 0.0 0.000 0.000 0.000  8 0 no 0.032 0 0 
       1  28 ASN QD 30 no 100.0 0.0 0.000 0.000 0.000  6 0 no 0.015 0 0 
       1  29 MET QB 29 no 100.0 0.0 0.000 0.000 0.000  6 0 no 0.000 0 0 
       1  30 GLU QB 51 no 100.0 0.0 0.000 0.000 0.000  4 0 no 0.056 0 0 
       1  31 ARG QB 28 no 100.0 0.0 0.000 0.000 0.000  6 0 no 0.018 0 0 
       1  31 ARG QG 50 no 100.0 0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1  32 GLN QB 76 no 100.0 0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1  32 GLN QE 75 no 100.0 0.0 0.000 0.000 0.000  2 0 no 0.045 0 0 
       1  33 GLN QB 49 no 100.0 0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1  35 ASP QB 12 no 100.0 0.0 0.000 0.000 0.000  8 0 no 0.000 0 0 
       1  36 ASN QD 48 no 100.0 0.0 0.000 0.000 0.000  4 0 no 0.034 0 0 
       1  37 LEU QB 74 no 100.0 0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1  37 LEU QD 11 no   0.0 0.0 0.000 0.005 0.005  8 0 no 0.159 0 0 
       1  38 LEU QD 73 no 100.0 0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1  39 LYS QB 27 no 100.0 0.0 0.000 0.007 0.007  6 0 no 0.078 0 0 
       1  40 SER QB 72 no 100.0 0.0 0.000 0.000 0.000  2 0 no 0.055 0 0 
       1  41 HIS QB  5 no 100.0 0.0 0.000 0.000 0.000 10 0 no 0.057 0 0 
       1  44 GLY QA 10 no 100.0 0.0 0.000 0.000 0.000  8 0 no 0.003 0 0 
       1  46 TYR QB 71 no 100.0 0.0 0.000 0.000 0.000  2 0 no 0.044 0 0 
       1  47 LEU QD 70 no 100.0 0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1  51 ARG QB 69 no 100.0 0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1  51 ARG QG 68 no 100.0 0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1  58 PHE QB 15 no 100.0 0.0 0.000 0.000 0.000  8 4 no 0.000 0 0 
       1  63 LYS QB 67 no 100.0 0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1  64 PHE QB 47 no 100.0 0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1  65 ASN QB 66 no 100.0 0.0 0.000 0.000 0.000  2 0 no 0.058 0 0 
       1  68 VAL QG  1 no 100.0 0.0 0.000 0.001 0.001 14 0 no 0.167 0 0 
       1  69 LYS QD 65 no 100.0 0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1  69 LYS QG 46 no 100.0 0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1  70 HIS QB 45 no 100.0 0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1  71 ILE QG 64 no 100.0 0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1  73 VAL QG  2 no 100.0 0.0 0.000 0.000 0.000 12 4 no 0.000 0 0 
       1  74 VAL QG 26 no 100.0 0.0 0.000 0.000 0.000  6 0 no 0.000 0 0 
       1  75 GLU QB 63 no 100.0 0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1  75 GLU QG 25 no 100.0 0.0 0.000 0.000 0.000  6 0 no 0.000 0 0 
       1  76 LYS QB 62 no 100.0 0.0 0.000 0.000 0.000  2 0 no 0.004 0 0 
       1  78 ASN QB 44 no 100.0 0.0 0.000 0.000 0.000  4 0 no 0.007 0 0 
       1  79 TRP QB 24 no 100.0 0.0 0.000 0.001 0.001  6 0 no 0.050 0 0 
       1  80 ILE QG 43 no 100.0 0.0 0.000 0.000 0.000  4 0 no 0.032 0 0 
       1  81 HIS QB 23 no 100.0 0.0 0.000 0.000 0.000  6 0 no 0.000 0 0 
       1  84 GLU QG 61 no 100.0 0.0 0.000 0.000 0.000  2 0 no 0.026 0 0 
       1  88 PHE QB  9 no 100.0 0.0 0.000 0.000 0.000  8 0 no 0.000 0 0 
       1  89 ASP QB 42 no 100.0 0.0 0.000 0.001 0.001  4 0 no 0.073 0 0 
       1  91 LEU QD  4 no 100.0 0.0 0.000 0.000 0.000 10 0 no 0.000 0 0 
       1  92 LEU QB 41 no 100.0 0.0 0.000 0.000 0.000  4 0 no 0.072 0 0 
       1  93 GLU QB  3 no 100.0 0.0 0.000 0.000 0.000 10 0 no 0.066 0 0 
       1  94 LEU QD 22 no 100.0 0.0 0.000 0.000 0.000  6 0 no 0.000 0 0 
       1  95 VAL QG  8 no 100.0 0.0 0.000 0.000 0.000  8 0 no 0.000 0 0 
       1  96 GLU QB 40 no 100.0 0.0 0.000 0.001 0.001  4 0 no 0.059 0 0 
       1  96 GLU QG 39 no 100.0 0.0 0.000 0.000 0.000  4 0 no 0.020 0 0 
       1  97 TYR QB 60 no 100.0 0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1  98 TYR QB 59 no 100.0 0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1  99 GLN QB 58 no 100.0 0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1  99 GLN QE 21 no 100.0 0.0 0.000 0.000 0.000  6 0 no 0.009 0 0 
       1  99 GLN QG 57 no 100.0 0.0 0.000 0.000 0.000  2 0 no 0.031 0 0 
       1 101 HIS QB 38 no 100.0 0.0 0.000 0.000 0.000  4 0 no 0.014 0 0 
       1 102 SER QB 20 no   0.0 0.0 0.000 0.000 0.000  6 0 no 0.043 0 0 
       1 103 LEU QD 37 no 100.0 0.0 0.000 0.000 0.000  4 0 no 0.006 0 0 
       1 104 LYS QB 36 no 100.0 0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1 105 GLU QG 19 no 100.0 0.0 0.000 0.000 0.000  6 0 no 0.004 0 0 
       1 107 PHE QB 18 no 100.0 0.0 0.000 0.000 0.000  6 0 no 0.035 0 0 
       1 109 GLN QB 35 no 100.0 0.0 0.000 0.002 0.002  4 0 no 0.067 0 0 
       1 110 LEU QB  7 no 100.0 0.0 0.000 0.000 0.000  8 0 no 0.022 0 0 
       1 110 LEU QD 34 no 100.0 0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1 111 ASP QB 33 no 100.0 0.0 0.000 0.000 0.000  4 0 no 0.052 0 0 
       1 114 LEU QD 56 no 100.0 0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1 115 LYS QB 17 no 100.0 0.0 0.000 0.000 0.000  6 0 no 0.000 0 0 
       1 115 LYS QG 32 no 100.0 0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1 117 PRO QD 55 no 100.0 0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1 118 TYR QB 16 no 100.0 0.0 0.000 0.000 0.000  6 0 no 0.040 0 0 
       1 119 LYS QG  6 no 100.0 0.0 0.000 0.001 0.001  8 0 no 0.096 0 0 
       1 121 ARG QB 54 no 100.0 0.0 0.000 0.000 0.000  2 0 no 0.030 0 0 
       1 122 GLU QB 53 no 100.0 0.0 0.000 0.001 0.001  2 0 no 0.098 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Saturday, May 11, 2024 12:53:33 PM GMT (wattos1)