NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
526422 2lc4 17598 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2lc4


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        115
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.082
    _Stereo_assign_list.Total_e_high_states  75.301
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   6 GLN QB  76 no 100.0   0.0  0.000  0.000 0.000  4 4 no 0.000 0 0 
       1   6 GLN QE  75 no 100.0   0.0  0.000  0.000 0.000  4 4 no 0.000 0 0 
       1   9 ASN QB 114 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  11 VAL QG 113 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  12 ILE QG  69 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.015 0 0 
       1  13 LYS QB  31 no 100.0   0.0  0.000  0.001 0.001  8 2 no 0.069 0 0 
       1  13 LYS QD 112 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  13 LYS QE 111 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.022 0 0 
       1  14 PRO QB 110 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.004 0 0 
       1  14 PRO QD  11 no 100.0  99.9  0.781  0.782 0.001 12 2 no 0.069 0 0 
       1  14 PRO QG 109 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  15 ASP QB  47 no   0.0   0.0  0.000  0.001 0.001  6 0 no 0.074 0 0 
       1  16 GLU QB 108 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  16 GLU QG  68 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.002 0 0 
       1  18 ARG QB  25 no 100.0  99.9  1.450  1.451 0.002  8 0 no 0.127 0 0 
       1  18 ARG QG  67 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.009 0 0 
       1  19 VAL QG  66 no 100.0   0.0  0.000  0.001 0.001  4 0 no 0.080 0 0 
       1  20 LYS QB  65 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.000 0 0 
       1  20 LYS QE 107 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  21 GLN QB  46 no 100.0   0.0  0.000  0.000 0.000  6 0 no 0.049 0 0 
       1  22 PHE QB  37 no 100.0 100.0  0.774  0.774 0.000  7 0 no 0.005 0 0 
       1  23 LEU QB  19 no 100.0  99.7  1.427  1.431 0.004 10 0 no 0.150 0 0 
       1  23 LEU QD   3 no 100.0   0.0  0.000  0.019 0.019 16 4 no 0.195 0 0 
       1  24 GLU QB  64 no   0.0   0.0  0.000  0.000 0.000  4 0 no 0.006 0 0 
       1  24 GLU QG  63 no   0.0   0.0  0.000  0.000 0.000  4 0 no 0.011 0 0 
       1  26 PHE QB   9 no 100.0 100.0  3.309  3.309 0.000 12 0 no 0.031 0 0 
       1  27 ASN QB   2 no 100.0 100.0  3.001  3.001 0.000 16 2 no 0.007 0 0 
       1  28 ILE QG  52 no 100.0 100.0  1.218  1.218 0.000  5 0 no 0.014 0 0 
       1  29 GLU QB  45 no 100.0   0.0  0.000  0.000 0.000  6 0 no 0.020 0 0 
       1  29 GLU QG  30 no 100.0 100.0  1.698  1.698 0.000  8 2 no 0.007 0 0 
       1  31 PHE QB  26 no 100.0 100.0  0.848  0.848 0.000  8 1 no 0.022 0 0 
       1  32 GLU QG  62 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.017 0 0 
       1  33 MET QB  51 no 100.0 100.0  2.561  2.561 0.000  5 0 no 0.016 0 0 
       1  33 MET QG   1 no 100.0   0.0  0.000  0.002 0.002 16 0 no 0.167 0 0 
       1  34 VAL QG 106 no 100.0   0.0  0.000  0.001 0.001  2 0 no 0.110 0 0 
       1  35 GLY QA 105 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  37 LEU QB  36 no 100.0 100.0  2.961  2.961 0.000  7 0 no 0.021 0 0 
       1  37 LEU QD  74 no   0.0   0.0  0.000  0.003 0.003  4 4 no 0.188 0 0 
       1  38 SER QB  13 no   5.0   0.0  0.000  0.003 0.003 12 4 no 0.188 0 0 
       1  39 ASN QB 104 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  39 ASN QD  32 no 100.0   0.0  0.000  0.000 0.000  8 4 no 0.056 0 0 
       1  41 GLN QB   8 no 100.0 100.0  0.184  0.184 0.000 13 4 no 0.003 0 0 
       1  42 GLY QA  61 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.000 0 0 
       1  44 PHE QB  18 no 100.0 100.0  1.673  1.674 0.000 10 0 no 0.040 0 0 
       1  46 LEU QB  24 no 100.0 100.0  1.761  1.761 0.000  8 0 no 0.000 0 0 
       1  46 LEU QD  60 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.007 0 0 
       1  47 VAL QG   4 no 100.0 100.0 14.964 14.964 0.000 15 3 no 0.019 0 0 
       1  48 LYS QB  35 no 100.0 100.0  1.479  1.479 0.000  7 0 no 0.007 0 0 
       1  48 LYS QD  44 no 100.0   0.0  0.000  0.000 0.000  6 0 no 0.001 0 0 
       1  48 LYS QE 103 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.008 0 0 
       1  48 LYS QG  43 no 100.0   0.0  0.000  0.000 0.000  6 0 no 0.000 0 0 
       1  49 GLY QA  23 no 100.0   0.0  0.000  0.001 0.001  8 0 no 0.117 0 0 
       1  52 GLY QA 102 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.003 0 0 
       1  53 VAL QG  14 no 100.0  99.2  1.515  1.528 0.012 11 0 no 0.305 0 0 
       1  54 HIS QB   5 no 100.0  99.9  2.722  2.724 0.002 15 6 no 0.106 0 0 
       1  55 ARG QB  50 no 100.0   0.0  0.000  0.001 0.001  6 4 no 0.120 0 0 
       1  55 ARG QD  73 no 100.0   0.0  0.000  0.001 0.001  4 4 no 0.120 0 0 
       1  55 ARG QG 101 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.061 0 0 
       1  56 VAL QG  70 no 100.0   0.0  0.000  0.000 0.000  4 2 no 0.016 0 0 
       1  57 ARG QB  42 no 100.0 100.0  1.731  1.731 0.000  6 0 no 0.009 0 0 
       1  57 ARG QD  59 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.000 0 0 
       1  57 ARG QG 100 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.003 0 0 
       1  58 VAL QG  99 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  60 ASP QB  15 no 100.0 100.0  1.023  1.023 0.000 11 2 no 0.017 0 0 
       1  61 TYR QB  98 no 100.0 100.0  0.340  0.341 0.000  2 0 no 0.017 0 0 
       1  62 LEU QB  41 no 100.0   0.0  0.000  0.000 0.000  6 0 no 0.021 0 0 
       1  62 LEU QD  97 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  63 GLY QA  40 no 100.0   0.0  0.000  0.000 0.000  6 0 no 0.005 0 0 
       1  64 ARG QD  96 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  64 ARG QG  95 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.079 0 0 
       1  65 ASN QD   7 no 100.0  98.8  0.480  0.486 0.006 13 3 no 0.129 0 0 
       1  66 ASP QB  94 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  67 GLY QA  12 no 100.0 100.0  1.275  1.275 0.000 12 4 no 0.032 0 0 
       1  68 LYS QB  39 no 100.0 100.0  1.595  1.595 0.000  6 0 no 0.014 0 0 
       1  68 LYS QE  58 no 100.0   0.0  0.000  0.002 0.002  4 0 no 0.111 0 0 
       1  68 LYS QG  93 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.022 0 0 
       1  70 VAL QG  34 no 100.0  99.5  0.371  0.373 0.002  7 0 no 0.074 0 0 
       1  71 GLY QA  57 no 100.0  99.8  0.800  0.802 0.002  4 0 no 0.071 0 0 
       1  72 ILE QG  92 no 100.0 100.0  0.992  0.992 0.000  2 0 no 0.000 0 0 
       1  73 SER QB   6 no 100.0   0.0  0.000  0.004 0.004 14 8 no 0.128 0 0 
       1  74 GLU QB  91 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  74 GLU QG  90 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.037 0 0 
       1  76 LYS QB  29 no 100.0 100.0  2.327  2.327 0.000  8 2 no 0.013 0 0 
       1  76 LYS QD  72 no 100.0   0.0  0.000  0.000 0.000  4 4 no 0.000 0 0 
       1  76 LYS QE  89 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.003 0 0 
       1  76 LYS QG  49 no 100.0   0.0  0.000  0.000 0.000  6 4 no 0.026 0 0 
       1  77 ILE QG  88 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  78 ASP QB  17 no 100.0 100.0  0.912  0.912 0.000 10 0 no 0.003 0 0 
       1  79 VAL QG  22 no 100.0 100.0  7.826  7.826 0.000  8 0 no 0.037 0 0 
       1  80 ILE QG  21 no 100.0  99.6  0.679  0.682 0.003  9 0 no 0.070 0 0 
       1  81 GLU QB 115 no 100.0 100.0  0.394  0.394 0.000  1 0 no 0.000 0 0 
       1  81 GLU QG  71 no 100.0   0.0  0.000  0.000 0.000  4 4 no 0.032 0 0 
       1  82 ILE QG  87 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  83 VAL QG  86 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  84 PRO QB  56 no 100.0 100.0  2.336  2.336 0.000  4 0 no 0.009 0 0 
       1  84 PRO QD  16 no 100.0  99.9  0.715  0.716 0.001 11 3 no 0.058 0 0 
       1  84 PRO QG  33 no 100.0 100.0  2.551  2.551 0.000  7 0 no 0.024 0 0 
       1  85 ASP QB  55 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.000 0 0 
       1  87 GLU QG  28 no 100.0   0.0  0.000  0.000 0.000  8 2 no 0.036 0 0 
       1  89 ASN QB  85 no 100.0   0.0  0.000  0.002 0.002  2 0 no 0.189 0 0 
       1  89 ASN QD  10 no 100.0  99.9  0.822  0.823 0.001 12 2 no 0.107 0 0 
       1  90 TRP QB  20 no 100.0 100.0  0.754  0.754 0.000  9 0 no 0.027 0 0 
       1  91 LEU QB  77 no 100.0 100.0  2.010  2.010 0.000  3 0 no 0.008 0 0 
       1  92 GLU QB  84 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  92 GLU QG  83 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  93 ARG QB  38 no 100.0 100.0  0.591  0.591 0.000  7 4 no 0.036 0 0 
       1  93 ARG QD  48 no   0.0   0.0  0.000  0.000 0.000  6 4 no 0.045 0 0 
       1  94 PRO QD  54 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.000 0 0 
       1  96 SER QB  27 no   0.0   0.0  0.000  0.000 0.000  8 2 no 0.031 0 0 
       1  97 LEU QB  82 no 100.0 100.0  0.369  0.369 0.000  2 0 no 0.000 0 0 
       1  99 LEU QB  81 no 100.0   0.0  0.000  0.001 0.001  2 0 no 0.119 0 0 
       1  99 LEU QD  80 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1 101 GLU QG  79 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1 102 ARG QD  53 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.000 0 0 
       1 102 ARG QG  78 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Friday, May 10, 2024 3:23:57 PM GMT (wattos1)