NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
512804 2l9w 17490 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2l9w


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        118
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.234
    _Stereo_assign_list.Total_e_high_states  87.141
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   3 LEU QB  35 no  80.0  99.9  0.572  0.572 0.001  9 3 no 0.073 0 0 
       1   3 LEU QD  42 no  55.0  99.9  0.519  0.520 0.000  8 2 no 0.063 0 0 
       1   6 ASN QD  93 no   5.0  95.9  0.002  0.002 0.000  3 1 no 0.028 0 0 
       1   8 VAL QG   6 no 100.0  99.8 10.238 10.255 0.017 16 3 no 0.200 0 0 
       1   9 LYS QG 104 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  10 ARG QB  78 no  25.0 100.0  0.003  0.003 0.000  4 0 no 0.000 0 0 
       1  11 LEU QB  39 no 100.0   0.0  0.000  0.000 0.000  8 1 no 0.000 0 0 
       1  11 LEU QD 103 no  95.0 100.0  1.749  1.749 0.000  2 0 no 0.000 0 0 
       1  12 LEU QB  62 no 100.0 100.0  0.002  0.002 0.000  6 1 no 0.104 0 0 
       1  12 LEU QD   8 no  95.0  99.9  1.121  1.122 0.001 14 4 no 0.057 0 0 
       1  14 SER QB  55 no 100.0  99.7  1.150  1.154 0.004  7 1 no 0.146 0 0 
       1  15 ARG QB  66 no   5.0  95.1  0.037  0.039 0.002  5 0 no 0.099 0 0 
       1  15 ARG QG 102 no  35.0  86.7  0.024  0.028 0.004  2 0 no 0.123 0 0 
       1  16 ASN QB  25 no  85.0 100.0  1.746  1.746 0.000 10 4 no 0.021 0 0 
       1  16 ASN QD  85 no  90.0  97.6  0.045  0.046 0.001  4 2 no 0.039 0 0 
       1  18 LYS QB 101 no 100.0 100.0  0.000  0.000 0.000  2 0 no 0.057 0 0 
       1  18 LYS QG  65 no  10.0  99.7  0.141  0.142 0.000  5 0 no 0.052 0 0 
       1  19 GLU QG  82 no  30.0 100.0  0.031  0.031 0.000  4 1 no 0.000 0 0 
       1  20 LEU QB  33 no 100.0 100.0  0.024  0.024 0.000  9 2 no 0.154 0 0 
       1  20 LEU QD  20 no 100.0  99.6  3.167  3.181 0.014 11 4 no 0.184 0 0 
       1  21 GLU QB 116 no  65.0  93.9  0.017  0.018 0.001  1 0 no 0.072 0 0 
       1  21 GLU QG  24 no  95.0  47.3  0.000  0.001 0.001 10 3 no 0.066 0 0 
       1  23 LEU QB  32 no 100.0 100.0  0.000  0.000 0.000  9 2 no 0.030 0 0 
       1  23 LEU QD   5 no 100.0  97.4  0.697  0.715 0.018 16 3 no 0.142 0 0 
       1  25 CYS QB  27 no  40.0  97.8  0.002  0.002 0.000  9 0 no 0.023 0 0 
       1  26 LEU QB  63 no  45.0  96.6  0.103  0.107 0.004  6 3 no 0.154 0 0 
       1  26 LEU QD  15 no  85.0 100.0  2.732  2.732 0.000 12 5 no 0.046 0 0 
       1  28 PRO QB 110 no  25.0 100.0  0.017  0.017 0.000  2 2 no 0.011 0 0 
       1  28 PRO QD  69 no 100.0  99.8  0.165  0.166 0.000  5 2 no 0.050 0 0 
       1  28 PRO QG 118 no 100.0   0.0  0.000  0.000 0.000  1 1 no 0.000 0 0 
       1  29 LEU QB 100 no  10.0  93.0  0.005  0.005 0.000  2 0 no 0.081 0 0 
       1  29 LEU QD  11 no  95.0  98.1  0.535  0.545 0.010 13 4 no 0.156 0 0 
       1  30 SER QB   7 no 100.0  99.9  2.144  2.145 0.001 14 2 no 0.052 0 0 
       1  31 ASP QB  92 no 100.0   0.0  0.000  0.000 0.000  3 0 no 0.000 0 0 
       1  32 LYS QB  31 no 100.0  96.2  0.054  0.056 0.002  9 2 no 0.074 0 0 
       1  33 VAL QG   4 no 100.0  99.9  4.239  4.243 0.004 17 8 no 0.074 0 0 
       1  34 SER QB  47 no  85.0 100.0  0.241  0.241 0.000  8 4 no 0.032 0 0 
       1  35 PRO QB 109 no  40.0 100.0  0.109  0.109 0.000  2 2 no 0.000 0 0 
       1  37 LEU QB  84 no 100.0 100.0  0.000  0.000 0.000  4 2 no 0.032 0 0 
       1  37 LEU QD  37 no  10.0 100.0  0.208  0.208 0.000  9 6 no 0.021 0 0 
       1  38 ILE QG  30 no 100.0  99.9  2.858  2.861 0.003  9 2 no 0.077 0 0 
       1  39 CYS QB  17 no 100.0  99.0  0.890  0.899 0.009 11 0 no 0.137 0 0 
       1  40 GLN QG  41 no 100.0   0.0  0.000  0.000 0.000  8 2 no 0.021 0 0 
       1  41 PHE QB  54 no  80.0  97.2  0.057  0.059 0.002  7 1 no 0.055 0 0 
       1  42 LEU QB  68 no 100.0   0.0  0.000  0.000 0.000  5 1 no 0.000 0 0 
       1  42 LEU QD  12 no  90.0  99.5  1.166  1.172 0.006 12 1 no 0.129 0 0 
       1  43 GLN QB  99 no 100.0 100.0  0.079  0.079 0.000  2 0 no 0.000 0 0 
       1  43 GLN QE 117 no 100.0   0.0  0.000  0.000 0.000  1 1 no 0.000 0 0 
       1  43 GLN QG  29 no 100.0   0.0  0.000  0.000 0.000  9 1 no 0.000 0 0 
       1  44 GLU QG  98 no  15.0  98.4  0.015  0.015 0.000  2 0 no 0.045 0 0 
       1  45 GLU QG  28 no  70.0  99.7  0.185  0.185 0.001  9 1 no 0.044 0 0 
       1  46 ILE QG  77 no  60.0  98.7  0.064  0.065 0.001  4 0 no 0.061 0 0 
       1  48 ILE QG  51 no  85.0  99.3  0.197  0.198 0.001  7 0 no 0.133 0 0 
       1  50 GLU QB  76 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.000 0 0 
       1  51 LYS QG 115 no   5.0 100.0  0.001  0.001 0.000  1 0 no 0.000 0 0 
       1  52 ASP QB  16 no  35.0  77.4  0.017  0.022 0.005 11 0 no 0.080 0 0 
       1  54 ARG QB  59 no 100.0  91.4  0.000  0.001 0.000  6 0 no 0.090 0 0 
       1  55 LYS QB  58 no 100.0 100.0  0.000  0.000 0.000  6 0 no 0.006 0 0 
       1  55 LYS QE 114 no 100.0   0.0  0.000  0.000 0.000  1 0 no 0.000 0 0 
       1  55 LYS QG  91 no   5.0 100.0  0.000  0.000 0.000  3 0 no 0.000 0 0 
       1  57 LEU QB  81 no 100.0 100.0  0.000  0.000 0.000  4 1 no 0.015 0 0 
       1  58 LEU QB  34 no  40.0  99.0  0.054  0.055 0.001  9 3 no 0.047 0 0 
       1  58 LEU QD   2 no  65.0 100.0  2.465  2.465 0.000 18 5 no 0.025 0 0 
       1  59 VAL QG   1 no 100.0 100.0 11.600 11.604 0.005 20 3 no 0.112 0 0 
       1  62 PHE QB  95 no  65.0  99.5  0.050  0.050 0.000  3 2 no 0.061 0 0 
       1  63 ASN QB  94 no 100.0  99.3  0.223  0.225 0.002  3 2 no 0.086 0 0 
       1  63 ASN QD 113 no 100.0   0.0  0.000  0.000 0.000  1 0 no 0.000 0 0 
       1  64 GLY QA  36 no  10.0  59.1  0.003  0.006 0.002  9 4 no 0.086 0 0 
       1  67 ILE QG 112 no 100.0   0.0  0.000  0.000 0.000  1 0 no 0.000 0 0 
       1  69 PHE QB  23 no  75.0  93.4  0.041  0.043 0.003 10 1 no 0.143 0 0 
       1  70 ARG QG  22 no 100.0  99.7  2.943  2.952 0.009 10 1 no 0.129 0 0 
       1  71 ASP QB  90 no   5.0 100.0  0.000  0.000 0.000  3 0 no 0.000 0 0 
       1  72 SER QB  13 no  30.0  99.6  0.518  0.520 0.002 12 3 no 0.069 0 0 
       1  73 LYS QB  38 no  50.0  99.4  0.110  0.111 0.001  8 1 no 0.069 0 0 
       1  73 LYS QG  97 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  74 PHE QB  80 no  95.0  88.9  0.000  0.001 0.000  4 1 no 0.069 0 0 
       1  77 LYS QB  75 no  90.0  99.9  0.252  0.252 0.000  4 0 no 0.051 0 0 
       1  77 LYS QD  89 no  85.0  99.9  2.090  2.093 0.002  3 0 no 0.151 0 0 
       1  77 LYS QG  74 no 100.0 100.0  0.000  0.000 0.000  4 0 no 0.006 0 0 
       1  78 MET QB  73 no 100.0 100.0  1.002  1.002 0.000  4 0 no 0.026 0 0 
       1  79 LEU QB  53 no  20.0  66.5  0.003  0.004 0.001  7 1 no 0.047 0 0 
       1  79 LEU QD  14 no  95.0 100.0  0.593  0.593 0.000 12 5 no 0.005 0 0 
       1  80 MET QG  67 no  70.0 100.0  0.178  0.178 0.000  5 1 no 0.000 0 0 
       1  81 ILE QG  50 no   5.0  63.2  0.000  0.001 0.000  7 0 no 0.038 0 0 
       1  82 LEU QB  46 no  70.0 100.0  0.735  0.736 0.000  8 4 no 0.046 0 0 
       1  82 LEU QD  45 no  90.0 100.0  3.385  3.385 0.001  8 4 no 0.070 0 0 
       1  83 ASN QB  44 no  10.0  98.6  0.004  0.004 0.000  8 4 no 0.023 0 0 
       1  83 ASN QD  48 no  85.0  99.9  0.388  0.388 0.001  8 8 no 0.043 0 0 
       1  84 GLY QA 108 no 100.0  93.1  0.005  0.006 0.000  2 2 no 0.132 0 0 
       1  85 SER QB  96 no  30.0  99.8  0.010  0.010 0.000  2 0 no 0.015 0 0 
       1  86 GLN QB  83 no 100.0 100.0  0.001  0.001 0.000  4 2 no 0.076 0 0 
       1  86 GLN QG  21 no  10.0  98.7  0.005  0.005 0.000 11 5 no 0.031 0 0 
       1  87 PHE QB  40 no  85.0 100.0  0.808  0.808 0.000  8 2 no 0.032 0 0 
       1  88 GLN QB 106 no 100.0   0.0  0.000  0.000 0.000  2 1 no 0.000 0 0 
       1  88 GLN QE  70 no  75.0 100.0  0.513  0.513 0.000  5 4 no 0.015 0 0 
       1  88 GLN QG  43 no  70.0 100.0  0.050  0.050 0.000  8 3 no 0.010 0 0 
       1  89 GLY QA  88 no 100.0 100.0  0.000  0.000 0.000  3 0 no 0.008 0 0 
       1  90 LYS QB  57 no  40.0  98.6  0.002  0.002 0.000  6 0 no 0.017 0 0 
       1  91 VAL QG   3 no 100.0  99.9 11.219 11.227 0.008 17 6 no 0.132 0 0 
       1  92 ILE QG  61 no  60.0 100.0  0.020  0.020 0.000  6 1 no 0.000 0 0 
       1  93 ARG QB  56 no   5.0 100.0  0.000  0.000 0.000  7 2 no 0.000 0 0 
       1  93 ARG QD  26 no  85.0  99.9  1.229  1.230 0.001 10 5 no 0.073 0 0 
       1  94 SER QB   9 no  65.0  95.1  1.468  1.543 0.075 14 6 no 0.374 0 0 
       1  95 GLY QA  10 no 100.0  91.9  0.015  0.017 0.001 14 7 no 0.226 0 0 
       1  97 ILE QG  87 no  70.0 100.0  0.414  0.414 0.000  3 0 no 0.022 0 0 
       1  98 ASN QB  18 no 100.0  99.8  1.717  1.720 0.003 11 2 no 0.093 0 0 
       1  98 ASN QD 107 no 100.0   0.0  0.000  0.000 0.000  2 2 no 0.000 0 0 
       1  99 ASP QB  19 no 100.0  90.3  0.001  0.002 0.000 11 4 no 0.080 0 0 
       1 101 LYS QB  64 no 100.0 100.0  0.003  0.003 0.000  5 0 no 0.071 0 0 
       1 102 ARG QG 105 no 100.0 100.0  0.001  0.001 0.000  2 1 no 0.089 0 0 
       1 103 TYR QB  72 no 100.0 100.0  0.013  0.013 0.000  4 0 no 0.148 0 0 
       1 104 TYR QB  49 no 100.0   0.0  0.000  0.000 0.000  7 0 no 0.000 0 0 
       1 105 ASN QD  60 no  85.0  99.9  1.286  1.287 0.001  6 1 no 0.089 0 0 
       1 106 ASN QD  79 no  75.0  99.9  0.210  0.211 0.000  4 1 no 0.042 0 0 
       1 107 GLN QB  71 no   5.0 100.0  0.001  0.001 0.000  4 0 no 0.000 0 0 
       1 107 GLN QG  52 no  95.0 100.0  2.975  2.976 0.001  7 1 no 0.097 0 0 
       1 108 GLN QG 111 no  10.0  97.7  0.013  0.014 0.000  1 0 no 0.071 0 0 
       1 109 ASN QD  86 no  70.0 100.0  0.918  0.918 0.000  3 0 no 0.026 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Wednesday, May 15, 2024 8:25:43 PM GMT (wattos1)