NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id cing stage program type subtype subsubtype item_count
48544 2jmd cing 2-parsed STAR distance general distance simple 7


data_2jmd_MR_file_constraints


save_Conversion_project
    _Study_list.Sf_category  study_list 
    _Study_list.Entry_ID     parsed_2jmd 
    _Study_list.ID           1 

    loop_
        _Study.ID 
        _Study.Name 
        _Study.Type 
        _Study.Details 
        _Study.Entry_ID 
        _Study.Study_list_ID 

        1   "Conversion project"    NMR   .   parsed_2jmd   1   
    stop_

save_


save_entry_information
    _Entry.Sf_category                  entry_information 
    _Entry.ID                           parsed_2jmd 
    _Entry.Title                       "Original constraint list(s)" 
    _Entry.Version_type                 original 
    _Entry.Submission_date              . 
    _Entry.Accession_date               . 
    _Entry.Last_release_date            . 
    _Entry.Original_release_date        . 
    _Entry.Origination                  . 
    _Entry.NMR_STAR_version             3.1 
    _Entry.Original_NMR_STAR_version    . 
    _Entry.Experimental_method          NMR 
    _Entry.Experimental_method_subtype  . 

    loop_
        _Related_entries.Database_name 
        _Related_entries.Database_accession_code 
        _Related_entries.Relationship 
        _Related_entries.Entry_ID 

        PDB   2jmd   "Master copy"    parsed_2jmd   
    stop_

save_


save_global_Org_file_characteristics
    _Constraint_stat_list.Sf_category  constraint_statistics 
    _Constraint_stat_list.Entry_ID     parsed_2jmd 
    _Constraint_stat_list.ID           1 

    loop_
        _Constraint_file.ID 
        _Constraint_file.Constraint_filename 
        _Constraint_file.Software_ID 
        _Constraint_file.Software_label 
        _Constraint_file.Software_name 
        _Constraint_file.Block_ID 
        _Constraint_file.Constraint_type 
        _Constraint_file.Constraint_subtype 
        _Constraint_file.Constraint_subsubtype 
        _Constraint_file.Constraint_number 
        _Constraint_file.Entry_ID 
        _Constraint_file.Constraint_stat_list_ID 

        1   2jmd.mr   .   .   "MR format"    1    comment                  "Not applicable"      "Not applicable"       0   parsed_2jmd   1   
        1   2jmd.mr   .   .    XPLOR/CNS     2    distance                  NOE                   simple             1334   parsed_2jmd   1   
        1   2jmd.mr   .   .    XPLOR/CNS     3    distance                 "general distance"     simple                7   parsed_2jmd   1   
        1   2jmd.mr   .   .    XPLOR/CNS     4   "dihedral angle"          "Not applicable"      "Not applicable"       0   parsed_2jmd   1   
        1   2jmd.mr   .   .   "MR format"    5   "nomenclature mapping"    "Not applicable"      "Not applicable"       0   parsed_2jmd   1   
    stop_

save_


save_CNS/XPLOR_distance_constraints_3
    _Distance_constraint_list.Sf_category         distance_constraints 
    _Distance_constraint_list.Entry_ID            parsed_2jmd 
    _Distance_constraint_list.ID                  1 
    _Distance_constraint_list.Constraint_type    "general distance" 
    _Distance_constraint_list.Constraint_file_ID  1 
    _Distance_constraint_list.Block_ID            3 
    _Distance_constraint_list.Details            "Generated by Wattos" 

    loop_
        _Dist_constraint_tree.Constraint_ID 
        _Dist_constraint_tree.Node_ID 
        _Dist_constraint_tree.Down_node_ID 
        _Dist_constraint_tree.Right_node_ID 
        _Dist_constraint_tree.Logic_operation 
        _Dist_constraint_tree.Entry_ID 
        _Dist_constraint_tree.Distance_constraint_list_ID 

        1   1   .   .   .   parsed_2jmd   1   
        2   1   .   .   .   parsed_2jmd   1   
        3   1   .   .   .   parsed_2jmd   1   
        4   1   .   .   .   parsed_2jmd   1   
        5   1   .   .   .   parsed_2jmd   1   
        6   1   .   .   .   parsed_2jmd   1   
        7   1   .   .   .   parsed_2jmd   1   
    stop_


    loop_
        _Dist_constraint.Tree_node_member_constraint_ID 
        _Dist_constraint.Tree_node_member_node_ID 
        _Dist_constraint.Constraint_tree_node_member_ID 
        _Dist_constraint.Assembly_atom_ID 
        _Dist_constraint.Entity_assembly_ID 
        _Dist_constraint.Entity_ID 
        _Dist_constraint.Comp_index_ID 
        _Dist_constraint.Seq_ID 
        _Dist_constraint.Comp_ID 
        _Dist_constraint.Atom_ID 
        _Dist_constraint.Resonance_ID 
        _Dist_constraint.Auth_asym_ID 
        _Dist_constraint.Auth_seq_ID 
        _Dist_constraint.Auth_comp_ID 
        _Dist_constraint.Auth_atom_ID 
        _Dist_constraint.Entry_ID 
        _Dist_constraint.Distance_constraint_list_ID 

        1   1   1   .   .   .   .   .   .   .   .   .    9   .   SG   parsed_2jmd   1   
        1   1   2   .   .   .   .   .   .   .   .   .   12   .   SG   parsed_2jmd   1   
        2   1   1   .   .   .   .   .   .   .   .   .    9   .   SG   parsed_2jmd   1   
        2   1   2   .   .   .   .   .   .   .   .   .   29   .   SG   parsed_2jmd   1   
        3   1   1   .   .   .   .   .   .   .   .   .    9   .   SG   parsed_2jmd   1   
        3   1   2   .   .   .   .   .   .   .   .   .   32   .   SG   parsed_2jmd   1   
        4   1   1   .   .   .   .   .   .   .   .   .   12   .   SG   parsed_2jmd   1   
        4   1   2   .   .   .   .   .   .   .   .   .   29   .   SG   parsed_2jmd   1   
        5   1   1   .   .   .   .   .   .   .   .   .   12   .   SG   parsed_2jmd   1   
        5   1   2   .   .   .   .   .   .   .   .   .   32   .   SG   parsed_2jmd   1   
        6   1   1   .   .   .   .   .   .   .   .   .   29   .   SG   parsed_2jmd   1   
        6   1   2   .   .   .   .   .   .   .   .   .   32   .   SG   parsed_2jmd   1   
        7   1   1   .   .   .   .   .   .   .   .   .   24   .   SG   parsed_2jmd   1   
        7   1   2   .   .   .   .   .   .   .   .   .   44   .   SG   parsed_2jmd   1   
    stop_


    loop_
        _Dist_constraint_value.Constraint_ID 
        _Dist_constraint_value.Tree_node_ID 
        _Dist_constraint_value.Source_experiment_ID 
        _Dist_constraint_value.Spectral_peak_ID 
        _Dist_constraint_value.Intensity_val 
        _Dist_constraint_value.Intensity_lower_val_err 
        _Dist_constraint_value.Intensity_upper_val_err 
        _Dist_constraint_value.Distance_val 
        _Dist_constraint_value.Distance_lower_bound_val 
        _Dist_constraint_value.Distance_upper_bound_val 
        _Dist_constraint_value.Entry_ID 
        _Dist_constraint_value.Distance_constraint_list_ID 

        1   1   .   .   .   .   .   3.96   3.77   4.15   parsed_2jmd   1   
        2   1   .   .   .   .   .   3.96   3.77   4.15   parsed_2jmd   1   
        3   1   .   .   .   .   .   3.96   3.77   4.15   parsed_2jmd   1   
        4   1   .   .   .   .   .   3.96   3.77   4.15   parsed_2jmd   1   
        5   1   .   .   .   .   .   3.96   3.77   4.15   parsed_2jmd   1   
        6   1   .   .   .   .   .   3.96   3.77   4.15   parsed_2jmd   1   
        7   1   .   .   .   .   .   3.96   3.77   4.15   parsed_2jmd   1   
    stop_


    loop_
        _Dist_constraint_comment_org.ID 
        _Dist_constraint_comment_org.Comment_text 
        _Dist_constraint_comment_org.Comment_begin_line 
        _Dist_constraint_comment_org.Comment_begin_column 
        _Dist_constraint_comment_org.Comment_end_line 
        _Dist_constraint_comment_org.Comment_end_column 
        _Dist_constraint_comment_org.Entry_ID 
        _Dist_constraint_comment_org.Distance_constraint_list_ID 

        1   
;
!!!!!!!!!!!!!!!!!!!site 1
S-S restraints
;
    2   1    3   16   parsed_2jmd   1   
        2   
;
!!!!!!!!!!!!!!!!!!!site 2
CYS24
;
   26   1   28    7   parsed_2jmd   1   
    stop_


    loop_
        _Dist_constraint_parse_err.ID 
        _Dist_constraint_parse_err.Content 
        _Dist_constraint_parse_err.Begin_line 
        _Dist_constraint_parse_err.Begin_column 
        _Dist_constraint_parse_err.End_line 
        _Dist_constraint_parse_err.End_column 
        _Dist_constraint_parse_err.Entry_ID 
        _Dist_constraint_parse_err.Distance_constraint_list_ID 

         1   "assign  (id 975)  (resid 9   and name   SG)  2.33  0.05 0.05"     15   1   15   60   parsed_2jmd   1   
         2   "assign  (id 975)  (resid 12  and name   SG)  2.33  0.05 0.05"     16   1   16   60   parsed_2jmd   1   
         3   "assign  (id 975)  (resid 29  and name   SG)  2.33  0.05 0.05"     17   1   17   60   parsed_2jmd   1   
         4   "assign  (id 975)  (resid 32  and name   SG)  2.33  0.05 0.05"     18   1   18   60   parsed_2jmd   1   
         5   "assign  (id 975)  (resid 9   and name   CB)  3.43  0.18  0.18"    21   1   21   61   parsed_2jmd   1   
         6   "assign  (id 975)  (resid 12  and name   CB)  3.43  0.18  0.18"    22   1   22   61   parsed_2jmd   1   
         7   "assign  (id 975)  (resid 29  and name   CB)  3.43  0.18  0.18"    23   1   23   61   parsed_2jmd   1   
         8   "assign  (id 975)  (resid 32  and name   CB)  3.43  0.18  0.18"    24   1   24   61   parsed_2jmd   1   
         9   "assign   (id 976)  (resid 24   and name  SG)  2.33  0.05 0.05"    33   1   33   61   parsed_2jmd   1   
        10   "assign   (id 976)  (resid 44  and name   SG)  2.33  0.05 0.05"    34   1   34   61   parsed_2jmd   1   
        11   
;
assign   (id 976)  (resid 26  and name   ND1)  2.04  0.4 0.4
     or  (id 976)  (resid 26  and name   NE2)
;
   35   1   36   45   parsed_2jmd   1   
        12   "assign  (id 976)  (resid 24   and name  CB)  3.43  0.18  0.18"    39   1   39   61   parsed_2jmd   1   
        13   "assign  (id 976)  (resid 44  and name   CB)  3.43  0.18  0.18"    40   1   40   61   parsed_2jmd   1   
        14   
;
assign  (id 976)  (resid 47 and name  OD1)  2.02  0.1  0.1
     or (id 976)  (resid 47 and name  OD2) 
;
   43   1   44   42   parsed_2jmd   1   
    stop_

save_





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