NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
463544 2yr3 11236 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2yr3


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        89
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.003
    _Stereo_assign_list.Total_e_high_states  214.290
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  8 MET QB 88 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  8 MET QG 87 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  9 GLU QB 31 no 100.0 100.0  2.888  2.888 0.000 12  4 no 0.005 0 0 
       1  9 GLU QG 49 no 100.0   0.0  0.000  0.000 0.000  8  2 no 0.002 0 0 
       1 10 VAL QG 64 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.018 0 0 
       1 12 PRO QB 20 no 100.0 100.0  0.517  0.517 0.000 15  5 no 0.026 0 0 
       1 12 PRO QD  7 no 100.0 100.0  0.825  0.826 0.000 24 10 no 0.017 0 0 
       1 12 PRO QG  8 no 100.0 100.0  1.510  1.510 0.000 21  9 no 0.004 0 0 
       1 13 SER QB 86 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 14 PHE QB 42 no 100.0 100.0  3.169  3.169 0.000 10  3 no 0.004 0 0 
       1 15 SER QB 63 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1 17 VAL QG 10 no 100.0 100.0 23.442 23.442 0.000 19  4 no 0.011 0 0 
       1 18 LEU QB 66 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.000 0 0 
       1 18 LEU QD  1 no 100.0 100.0 38.421 38.421 0.000 42 11 no 0.005 0 0 
       1 19 LYS QB 76 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 21 CYS QB 68 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.020 0 0 
       1 23 VAL QG  5 no 100.0 100.0  8.298  8.298 0.000 33  6 no 0.008 0 0 
       1 24 ILE QG 62 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1 25 GLU QG 48 no 100.0   0.0  0.000  0.000 0.000  8  2 no 0.013 0 0 
       1 27 GLN QB 12 no 100.0 100.0  0.791  0.791 0.000 18  4 no 0.019 0 0 
       1 27 GLN QG 29 no 100.0   0.0  0.000  0.000 0.000 12  0 no 0.072 0 0 
       1 28 ASP QB 61 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1 30 VAL QG 28 no 100.0   0.0  0.000  0.000 0.000 12  0 no 0.000 0 0 
       1 31 LEU QD 13 no 100.0   0.0  0.000  0.000 0.000 18  6 no 0.000 0 0 
       1 32 GLN QB 35 no 100.0 100.0  0.655  0.655 0.000 11  3 no 0.001 0 0 
       1 32 GLN QE 55 no 100.0 100.0  1.636  1.636 0.000  7  5 no 0.000 0 0 
       1 32 GLN QG 85 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 33 CYS QB 19 no 100.0 100.0  1.067  1.067 0.000 15  3 no 0.004 0 0 
       1 35 VAL QG 75 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 36 ARG QB 79 no 100.0   0.0  0.000  0.001 0.001  4  2 no 0.099 0 0 
       1 37 GLY QA 14 no 100.0 100.0  2.641  2.643 0.001 18  7 no 0.099 0 0 
       1 39 PRO QB 60 no 100.0 100.0  0.347  0.347 0.000  6  0 no 0.000 0 0 
       1 39 PRO QD 21 no 100.0 100.0  2.311  2.311 0.000 15  8 no 0.002 0 0 
       1 39 PRO QG 89 no 100.0 100.0  1.287  1.287 0.000  2  1 no 0.007 0 0 
       1 40 VAL QG 54 no 100.0   0.0  0.000  0.000 0.000  8  4 no 0.036 0 0 
       1 41 PRO QB 11 no 100.0 100.0  1.645  1.645 0.000 18  4 no 0.002 0 0 
       1 41 PRO QD 16 no 100.0 100.0  2.536  2.537 0.000 17  5 no 0.036 0 0 
       1 41 PRO QG 34 no 100.0 100.0  2.724  2.724 0.000 11  3 no 0.009 0 0 
       1 42 ARG QG 74 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 43 ILE QG 30 no 100.0 100.0  1.977  1.977 0.000 12  2 no 0.004 0 0 
       1 45 TRP QB 24 no 100.0   0.0  0.000  0.000 0.000 14  4 no 0.000 0 0 
       1 46 LEU QB 53 no 100.0   0.0  0.000  0.000 0.000  8  4 no 0.003 0 0 
       1 46 LEU QD 52 no 100.0   0.0  0.000  0.000 0.000  8  4 no 0.015 0 0 
       1 47 LEU QD 43 no 100.0   0.0  0.000  0.000 0.000 10  4 no 0.004 0 0 
       1 48 ASN QD 67 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.000 0 0 
       1 50 GLN QB 78 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.012 0 0 
       1 50 GLN QG 65 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.000 0 0 
       1 51 PRO QB 73 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 51 PRO QD 36 no 100.0 100.0  0.761  0.761 0.000 11  4 no 0.000 0 0 
       1 52 ILE QG 27 no 100.0 100.0  1.966  1.966 0.000 12  0 no 0.000 0 0 
       1 53 GLN QG 72 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 56 ARG QG 59 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1 57 SER QB 40 no 100.0   0.0  0.000  0.000 0.000 10  2 no 0.012 0 0 
       1 59 CYS QB 39 no 100.0   0.0  0.000  0.000 0.000 10  2 no 0.000 0 0 
       1 62 GLY QA 84 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 63 VAL QG 46 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1 65 GLU QB 71 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 65 GLU QG 17 no 100.0 100.0  0.296  0.296 0.000 16  2 no 0.000 0 0 
       1 66 LEU QB 38 no 100.0   0.0  0.000  0.000 0.000 10  2 no 0.000 0 0 
       1 66 LEU QD  4 no 100.0 100.0 18.579 18.579 0.000 38  8 no 0.012 0 0 
       1 68 ILE QG 45 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1 69 GLN QB 44 no 100.0 100.0  1.896  1.896 0.000  9  2 no 0.000 0 0 
       1 70 ASP QB 47 no 100.0 100.0  0.509  0.509 0.000  8  2 no 0.000 0 0 
       1 72 LEU QB  9 no 100.0 100.0  1.656  1.656 0.000 21 12 no 0.000 0 0 
       1 72 LEU QD 15 no 100.0 100.0 19.217 19.217 0.000 18 11 no 0.004 0 0 
       1 73 PRO QB 81 no 100.0 100.0  1.007  1.007 0.000  3  1 no 0.000 0 0 
       1 73 PRO QD 33 no 100.0 100.0  0.703  0.703 0.000 12  7 no 0.004 0 0 
       1 73 PRO QG 83 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 74 GLU QG 32 no 100.0   0.0  0.000  0.000 0.000 12  6 no 0.002 0 0 
       1 75 ASP QB 58 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1 76 HIS QB 37 no 100.0   0.0  0.000  0.000 0.000 10  2 no 0.020 0 0 
       1 79 TYR QB 69 no 100.0   0.0  0.000  0.000 0.000  6  6 no 0.000 0 0 
       1 81 CYS QB 26 no 100.0 100.0  1.044  1.044 0.000 13  2 no 0.002 0 0 
       1 82 LEU QB 51 no 100.0   0.0  0.000  0.000 0.000  8  4 no 0.000 0 0 
       1 82 LEU QD 25 no 100.0   0.0  0.000  0.000 0.000 14  8 no 0.000 0 0 
       1 84 GLU QG 70 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 85 ASN QB 41 no 100.0 100.0  2.251  2.251 0.000 10  3 no 0.005 0 0 
       1 85 ASN QD  6 no 100.0 100.0  3.299  3.299 0.000 26 12 no 0.010 0 0 
       1 87 LEU QB 22 no 100.0 100.0  0.756  0.756 0.000 14  2 no 0.017 0 0 
       1 87 LEU QD 23 no 100.0   0.0  0.000  0.000 0.000 14  4 no 0.007 0 0 
       1 88 GLY QA 50 no 100.0 100.0  1.620  1.620 0.000  8  3 no 0.026 0 0 
       1 89 GLN QB 57 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1 89 GLN QE 80 no 100.0   0.0  0.000  0.000 0.000  4  4 no 0.000 0 0 
       1 90 VAL QG  2 no 100.0 100.0 14.064 14.064 0.000 41 11 no 0.008 0 0 
       1 92 CYS QB 77 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.000 0 0 
       1 95 TRP QB 82 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 96 VAL QG 18 no 100.0   0.0  0.000  0.000 0.000 16  4 no 0.020 0 0 
       1 98 VAL QG  3 no 100.0 100.0 45.973 45.973 0.000 38  5 no 0.003 0 0 
       1 99 HIS QB 56 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Wednesday, May 22, 2024 5:09:42 AM GMT (wattos1)