NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
453280 2yrp 11148 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2yrp


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        138
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.010
    _Stereo_assign_list.Total_e_high_states  400.780
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   8 LEU QB  55 no 100.0 100.0  0.617  0.617 0.000  9  7 no 0.012 0 0 
       1   8 LEU QD  20 no 100.0 100.0 17.984 17.984 0.000 18  9 no 0.016 0 0 
       1   9 PRO QB  43 no 100.0   0.0  0.000  0.000 0.000 12  6 no 0.043 0 0 
       1   9 PRO QD  29 no 100.0 100.0  1.203  1.203 0.000 15 10 no 0.012 0 0 
       1   9 PRO QG  24 no 100.0 100.0  1.730  1.730 0.000 16  4 no 0.006 0 0 
       1  10 GLN QB  90 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1  10 GLN QE 135 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  11 VAL QG  11 no 100.0 100.0 18.786 18.786 0.000 22  6 no 0.002 0 0 
       1  12 GLU QB  33 no 100.0 100.0  0.613  0.613 0.000 13  3 no 0.005 0 0 
       1  14 TYR QB  35 no 100.0 100.0  0.756  0.756 0.000 13  6 no 0.000 0 0 
       1  15 SER QB 121 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.009 0 0 
       1  16 PRO QB  89 no 100.0 100.0  0.860  0.860 0.000  6  0 no 0.001 0 0 
       1  16 PRO QD  96 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.004 0 0 
       1  16 PRO QG 120 no 100.0 100.0  1.004  1.004 0.000  4  0 no 0.000 0 0 
       1  17 SER QB 119 no   0.0   0.0  0.000  0.000 0.000  4  0 no 0.013 0 0 
       1  19 CYS QB  51 no 100.0   0.0  0.000  0.000 0.000 10  4 no 0.000 0 0 
       1  20 SER QB  68 no 100.0   0.0  0.000  0.000 0.000  8  2 no 0.002 0 0 
       1  21 VAL QG   5 no 100.0 100.0 12.868 12.868 0.000 30  5 no 0.032 0 0 
       1  22 ARG QB  88 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1  22 ARG QG  95 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.000 0 0 
       1  23 GLY QA  94 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.000 0 0 
       1  24 GLY QA 134 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  25 GLU QB 118 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.010 0 0 
       1  25 GLU QG  67 no 100.0   0.0  0.000  0.000 0.000  8  2 no 0.005 0 0 
       1  26 GLU QG  61 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1  27 LEU QB  31 no 100.0 100.0  1.160  1.160 0.000 14  8 no 0.007 0 0 
       1  27 LEU QD   8 no 100.0 100.0 21.737 21.737 0.000 27 12 no 0.006 0 0 
       1  28 VAL QG  37 no 100.0 100.0 11.914 11.914 0.000 12  0 no 0.001 0 0 
       1  29 LEU QB  42 no 100.0   0.0  0.000  0.000 0.000 12  6 no 0.013 0 0 
       1  29 LEU QD   7 no 100.0 100.0 14.788 14.788 0.000 27 10 no 0.000 0 0 
       1  31 GLY QA  27 no 100.0 100.0  1.131  1.131 0.000 15  3 no 0.005 0 0 
       1  32 SER QB 122 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.002 0 0 
       1  33 ASN QB 117 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  33 ASN QD 133 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  34 PHE QB  50 no 100.0   0.0  0.000  0.000 0.000 10  4 no 0.006 0 0 
       1  35 LEU QD  23 no 100.0 100.0 15.410 15.410 0.000 17  6 no 0.002 0 0 
       1  36 PRO QB 132 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  36 PRO QD  47 no 100.0   0.0  0.000  0.000 0.000 10  2 no 0.003 0 0 
       1  38 SER QB  41 no 100.0   0.0  0.000  0.000 0.000 12  6 no 0.009 0 0 
       1  39 LYS QG 116 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  40 VAL QG  10 no 100.0 100.0 25.009 25.009 0.000 25  7 no 0.002 0 0 
       1  41 VAL QG  17 no 100.0 100.0 16.923 16.923 0.000 18  2 no 0.002 0 0 
       1  42 PHE QB  32 no 100.0 100.0  3.471  3.471 0.000 13  1 no 0.017 0 0 
       1  43 ILE QG  15 no 100.0 100.0  1.401  1.401 0.000 19  4 no 0.000 0 0 
       1  44 GLU QB  34 no 100.0 100.0  1.849  1.849 0.000 13  6 no 0.000 0 0 
       1  44 GLU QG  66 no 100.0 100.0  2.602  2.602 0.000  8  2 no 0.002 0 0 
       1  45 ARG QD 131 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  46 GLY QA 115 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  50 LYS QB 114 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.009 0 0 
       1  50 LYS QG  87 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1  51 LEU QB  28 no 100.0 100.0  3.021  3.021 0.000 15  4 no 0.022 0 0 
       1  51 LEU QD  21 no 100.0 100.0  1.003  1.003 0.000 17  4 no 0.011 0 0 
       1  52 GLN QB 130 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  52 GLN QG 113 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.010 0 0 
       1  53 TRP QB  49 no 100.0   0.0  0.000  0.000 0.000 10  4 no 0.019 0 0 
       1  54 GLU QB 129 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  54 GLU QG 128 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  55 GLU QB  86 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1  55 GLU QG  85 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.043 0 0 
       1  56 GLU QB 112 no 100.0   0.0  0.000  0.003 0.003  4  0 no 0.173 0 0 
       1  56 GLU QG  84 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.025 0 0 
       1  59 VAL QG   6 no 100.0 100.0 29.569 29.569 0.000 29 12 no 0.048 0 0 
       1  60 ASN QB  40 no 100.0   0.0  0.000  0.000 0.000 12  4 no 0.001 0 0 
       1  60 ASN QD  75 no 100.0   0.0  0.000  0.000 0.000  8  8 no 0.009 0 0 
       1  61 ARG QB 127 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.004 0 0 
       1  61 ARG QD  65 no 100.0   0.0  0.000  0.001 0.001  8  2 no 0.087 0 0 
       1  61 ARG QG 111 no 100.0   0.0  0.000  0.001 0.001  4  0 no 0.144 0 0 
       1  62 LEU QB  54 no 100.0   0.0  0.000  0.000 0.000 10  8 no 0.000 0 0 
       1  62 LEU QD 100 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.000 0 0 
       1  63 GLN QB  60 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1  63 GLN QG  45 no 100.0   0.0  0.000  0.000 0.000 12  8 no 0.014 0 0 
       1  64 SER QB  30 no 100.0   0.0  0.000  0.000 0.000 14  4 no 0.006 0 0 
       1  65 ASN QB 126 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  65 ASN QD 138 no 100.0   0.0  0.000  0.000 0.000  2  2 no 0.001 0 0 
       1  67 VAL QG  18 no 100.0 100.0 14.825 14.825 0.000 18  4 no 0.001 0 0 
       1  69 LEU QB  12 no 100.0 100.0  2.277  2.277 0.000 22 10 no 0.013 0 0 
       1  69 LEU QD   3 no 100.0 100.0 17.425 17.425 0.000 35 22 no 0.004 0 0 
       1  71 LEU QB  36 no 100.0 100.0  0.262  0.262 0.000 13  7 no 0.004 0 0 
       1  71 LEU QD   9 no 100.0 100.0 20.532 20.532 0.000 25  6 no 0.007 0 0 
       1  73 VAL QG   1 no 100.0 100.0 18.080 18.080 0.000 37 15 no 0.048 0 0 
       1  74 PRO QB  59 no 100.0 100.0  2.623  2.623 0.000  8  0 no 0.022 0 0 
       1  74 PRO QD  39 no 100.0   0.0  0.000  0.000 0.000 12  4 no 0.000 0 0 
       1  75 GLU QB 110 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.038 0 0 
       1  75 GLU QG  83 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.050 0 0 
       1  76 TYR QB  58 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1  77 SER QB 109 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  78 ASN QB  64 no 100.0   0.0  0.000  0.000 0.000  8  2 no 0.012 0 0 
       1  78 ASN QD 137 no 100.0   0.0  0.000  0.000 0.000  2  2 no 0.001 0 0 
       1  79 LYS QB  82 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1  79 LYS QD 125 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.045 0 0 
       1  79 LYS QG  57 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.050 0 0 
       1  80 ARG QB  81 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.041 0 0 
       1  80 ARG QG 108 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.013 0 0 
       1  81 VAL QG  13 no 100.0 100.0  3.653  3.653 0.000 21  6 no 0.014 0 0 
       1  82 SER QB 107 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  83 ARG QB  93 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.000 0 0 
       1  84 PRO QB  73 no 100.0   0.0  0.000  0.000 0.000  8  6 no 0.000 0 0 
       1  84 PRO QD  52 no 100.0 100.0  2.064  2.064 0.000 10  5 no 0.022 0 0 
       1  84 PRO QG  76 no 100.0 100.0  0.763  0.763 0.000  7  5 no 0.003 0 0 
       1  85 VAL QG  22 no 100.0 100.0  9.111  9.111 0.000 17  5 no 0.000 0 0 
       1  86 GLN QB  80 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.007 0 0 
       1  86 GLN QE  46 no 100.0   0.0  0.000  0.000 0.000 10  0 no 0.001 0 0 
       1  86 GLN QG 106 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.001 0 0 
       1  87 VAL QG   4 no 100.0 100.0 35.461 35.461 0.000 34  8 no 0.001 0 0 
       1  88 TYR QB  48 no 100.0   0.0  0.000  0.000 0.000 10  4 no 0.001 0 0 
       1  89 PHE QB  92 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.000 0 0 
       1  90 TYR QB  79 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.001 0 0 
       1  91 VAL QG   2 no 100.0 100.0 21.916 21.916 0.000 35 13 no 0.014 0 0 
       1  92 SER QB  63 no 100.0   0.0  0.000  0.000 0.000  8  2 no 0.008 0 0 
       1  93 ASN QB  71 no 100.0   0.0  0.000  0.000 0.000  8  4 no 0.008 0 0 
       1  93 ASN QD  72 no 100.0   0.0  0.000  0.000 0.000  8  6 no 0.043 0 0 
       1  94 GLY QA 124 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.022 0 0 
       1  95 ARG QG  78 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.013 0 0 
       1  97 LYS QB  26 no 100.0 100.0  2.661  2.661 0.000 16  8 no 0.061 0 0 
       1  97 LYS QD 136 no 100.0   0.0  0.000  0.000 0.000  2  2 no 0.016 0 0 
       1  97 LYS QG 105 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.016 0 0 
       1  98 ARG QB  70 no 100.0   0.0  0.000  0.001 0.001  8  4 no 0.106 0 0 
       1  98 ARG QD  99 no 100.0   0.0  0.000  0.001 0.001  6  4 no 0.106 0 0 
       1  99 SER QB  44 no 100.0   0.0  0.000  0.000 0.000 12  8 no 0.025 0 0 
       1 100 PRO QB  98 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.031 0 0 
       1 100 PRO QD  97 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.000 0 0 
       1 102 GLN QB  77 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.002 0 0 
       1 102 GLN QE  69 no 100.0   0.0  0.000  0.000 0.000  8  4 no 0.008 0 0 
       1 102 GLN QG  91 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.003 0 0 
       1 103 SER QB 104 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 104 PHE QB  62 no 100.0   0.0  0.000  0.000 0.000  8  2 no 0.000 0 0 
       1 105 ARG QB  38 no  95.0 100.0  2.177  2.177 0.001 12  2 no 0.101 0 0 
       1 105 ARG QD  74 no 100.0   0.0  0.000  0.000 0.000  8  8 no 0.002 0 0 
       1 105 ARG QG  56 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.032 0 0 
       1 106 PHE QB  25 no 100.0 100.0  1.488  1.488 0.000 16  6 no 0.017 0 0 
       1 107 LEU QB  53 no 100.0 100.0  0.568  0.568 0.000 10  6 no 0.012 0 0 
       1 107 LEU QD  14 no 100.0 100.0 24.353 24.353 0.000 20 12 no 0.018 0 0 
       1 108 PRO QB 102 no 100.0 100.0  1.214  1.214 0.000  5  0 no 0.000 0 0 
       1 108 PRO QD  16 no 100.0 100.0  2.950  2.950 0.000 19 12 no 0.010 0 0 
       1 108 PRO QG 101 no 100.0 100.0  2.190  2.190 0.000  5  0 no 0.000 0 0 
       1 109 VAL QG  19 no 100.0 100.0  6.772  6.773 0.000 18  5 no 0.048 0 0 
       1 110 ILE QG 103 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 112 LYS QB 123 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Sunday, May 12, 2024 10:26:00 AM GMT (wattos1)