NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
442076 2kbx 16063 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2kbx


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        104
    _Stereo_assign_list.Swap_count           6
    _Stereo_assign_list.Swap_percentage      5.8
    _Stereo_assign_list.Deassign_count       14
    _Stereo_assign_list.Deassign_percentage  13.5
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   34.183
    _Stereo_assign_list.Total_e_high_states  397.476
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       2 10 CYS QB  26 no  100.0  84.7  0.242  0.286 0.044 11  0 no  0.317  0  0 
       2 11 GLU QB  21 no  100.0 100.0  0.015  0.015 0.000 13  5 no  0.000  0  0 
       2 11 GLU QG  30 no  100.0 100.0  0.769  0.769 0.000 11  4 no  0.000  0  0 
       2 12 ARG QB  66 no  100.0   0.0  0.000  0.000 0.000  5  1 no  0.000  0  0 
       2 13 CYS QB  32 no   45.0  96.3  0.121  0.126 0.005 10  0 no  0.210  0  0 
       2 14 LYS QB   7 no    5.0   6.2  0.003  0.048 0.045 18 11 no  0.252  0  0 
       2 14 LYS QD   5 no  100.0  92.1  0.459  0.499 0.039 19 10 no  0.235  0  0 
       2 14 LYS QE  17 no   75.0  94.3  0.057  0.061 0.003 14  9 no  0.243  0  0 
       2 14 LYS QG  12 no  100.0  99.4  1.668  1.678 0.010 16 10 no  0.243  0  0 
       2 15 GLY QA  64 no  100.0  99.9  0.058  0.058 0.000  5  0 no  0.036  0  0 
       2 16 GLY QA  44 no  100.0  99.7  0.023  0.023 0.000  8  0 no  0.037  0  0 
       2 17 PHE QB  10 no  100.0  89.7  2.287  2.549 0.262 16  2 no  0.636  0  1 
       2 17 PHE QD  14 yes 100.0  95.6 32.040 33.517 1.477 14  2 yes 0.939  0 40 
       2 17 PHE QE  25 yes 100.0  99.0 29.936 30.229 0.293 11  0 no  0.569  0  4 
       2 19 PRO QB   6 no  100.0  96.2  3.096  3.218 0.123 18  7 no  0.479  0  0 
       2 19 PRO QD   9 no   50.0   4.4  0.136  3.113 2.978 17  8 yes 1.303 22 60 
       2 19 PRO QG  22 no  100.0  83.8  2.360  2.816 0.455 13  6 yes 0.666  0 16 
       2 21 GLU QB  16 no  100.0  87.6  1.213  1.384 0.171 14  4 no  0.485  0  0 
       2 21 GLU QG  28 no  100.0   0.0  0.000  0.000 0.000 11  3 no  0.000  0  0 
       2 22 LYS QD  91 no  100.0  99.1  1.609  1.623 0.014  2  0 no  0.293  0  0 
       2 22 LYS QE  79 no   90.0  79.4  0.968  1.219 0.251  4  2 no  0.499  0  0 
       2 22 LYS QG  77 no  100.0  67.1  1.078  1.607 0.529  4  0 yes 0.683  0 24 
       2 23 ILE QG  19 no  100.0   0.0  0.000  0.051 0.051 13  2 no  0.252  0  0 
       2 24 VAL QG   2 no  100.0 100.0 15.292 15.292 0.000 30  9 no  0.019  0  0 
       2 25 ASN QB  13 no  100.0  99.5  3.203  3.218 0.015 15  8 no  0.149  0  0 
       2 25 ASN QD   4 no  100.0  99.4  1.990  2.001 0.011 23 10 no  0.149  0  0 
       2 26 SER QB  36 no  100.0  99.1  1.608  1.622 0.014 10  5 no  0.258  0  0 
       2 27 ASN QB  11 no  100.0  96.8  4.351  4.493 0.142 16  7 no  0.356  0  0 
       2 27 ASN QD  50 no  100.0  98.9  1.353  1.368 0.015  7  4 no  0.224  0  0 
       2 28 GLY QA  35 no   95.0  97.2  0.180  0.185 0.005 10  4 no  0.132  0  0 
       2 29 GLU QB  20 no  100.0 100.0  1.860  1.860 0.000 13  5 no  0.034  0  0 
       2 29 GLU QG  41 no   50.0  93.6  0.162  0.173 0.011  9  2 no  0.177  0  0 
       2 30 LEU QB  24 no  100.0  98.5  1.570  1.594 0.025 12  4 no  0.285  0  0 
       2 30 LEU QD   1 no  100.0  99.9  8.642  8.654 0.012 41 16 no  0.171  0  0 
       2 31 TYR QB  23 no  100.0  99.8  2.418  2.423 0.005 12  0 no  0.127  0  0 
       2 31 TYR QD   8 no  100.0  99.9 70.744 70.847 0.103 17  7 no  0.350  0  0 
       2 31 TYR QE  78 no  100.0 100.0 18.751 18.759 0.008  4  2 no  0.174  0  0 
       2 33 GLU QG  27 no  100.0  99.4  1.238  1.246 0.008 11  2 no  0.122  0  0 
       2 34 GLN QB  34 no   30.0  93.5  0.006  0.006 0.000 10  2 no  0.080  0  0 
       2 34 GLN QE  46 no  100.0  99.8  0.923  0.925 0.002  8  2 no  0.114  0  0 
       2 35 CYS QB  39 no  100.0  97.2  6.994  7.199 0.205  9  0 no  0.401  0  0 
       2 36 PHE QB  86 no  100.0  99.9  4.139  4.145 0.006  3  0 no  0.226  0  0 
       2 36 PHE QD  48 no  100.0  99.2 39.969 40.278 0.309  7  2 no  0.566  0  2 
       2 36 PHE QE  87 no  100.0  99.2  9.427  9.503 0.076  3  2 no  0.362  0  0 
       2 37 VAL QG   3 no  100.0  99.9 17.065 17.085 0.020 29  6 no  0.298  0  0 
       2 38 CYS QB  18 no  100.0  94.7  0.572  0.604 0.032 13  0 no  0.253  0  0 
       2 40 GLN QB  76 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       2 40 GLN QE 104 no   85.0  99.8  1.587  1.589 0.003  1  0 no  0.157  0  0 
       2 40 GLN QG  63 no   10.0  11.3  0.003  0.027 0.024  5  0 no  0.379  0  0 
       2 42 PHE QB  62 no  100.0  79.3  3.101  3.911 0.809  5  0 yes 0.953  0 20 
       2 42 PHE QD  65 no  100.0  99.7  0.646  0.648 0.002  5  1 no  0.145  0  0 
       2 42 PHE QE 103 no   95.0 100.0  0.001  0.001 0.000  1  0 no  0.054  0  0 
       2 43 GLN QE 102 no  100.0 100.0  0.000  0.000 0.000  1  0 no  0.021  0  0 
       2 43 GLN QG  75 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       2 44 GLN QB  31 no   20.0  90.9  0.007  0.008 0.001 11  5 no  0.077  0  0 
       2 44 GLN QE  51 no  100.0  98.9  1.458  1.475 0.016  7  5 no  0.298  0  0 
       2 45 PHE QB  90 no  100.0   0.0  0.000  0.000 0.000  2  0 no  0.000  0  0 
       2 45 PHE QD 101 no  100.0   0.0  0.000  0.000 0.000  1  0 no  0.000  0  0 
       2 45 PHE QE 100 yes 100.0  99.6  0.112  0.113 0.000  1  0 no  0.073  0  0 
       2 46 PRO QB  74 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       2 46 PRO QD  99 no  100.0  84.9  0.400  0.472 0.071  1  0 no  0.323  0  0 
       2 46 PRO QG  98 no  100.0  86.1  0.273  0.317 0.044  1  0 no  0.278  0  0 
       2 47 GLU QB  45 no   65.0  50.7  0.046  0.091 0.045  8  2 no  0.459  0  0 
       2 47 GLU QG  33 no   25.0  73.6  0.071  0.096 0.025 10  2 no  0.463  0  0 
       2 48 GLY QA  57 no  100.0   0.0  0.000  0.261 0.261  6  0 no  0.512  0  2 
       2 49 LEU QB  15 no   75.0  80.4  0.086  0.108 0.021 14  4 no  0.268  0  0 
       2 49 LEU QD  29 no   35.0  76.6  0.015  0.019 0.004 11  4 no  0.211  0  0 
       2 50 PHE QD  97 no   90.0  79.1  2.217  2.801 0.584  1  0 yes 1.139  7  9 
       2 50 PHE QE  96 no   55.0  98.5  2.268  2.304 0.036  1  0 no  0.388  0  0 
       2 51 TYR QB  85 no  100.0   0.0  0.000  0.000 0.000  3  0 no  0.000  0  0 
       2 51 TYR QD  84 no   40.0  42.0  0.214  0.510 0.296  3  0 yes 2.056  4  5 
       2 51 TYR QE  89 no   30.0  27.1  0.023  0.083 0.061  2  0 no  0.822  0  3 
       2 52 GLU QB  56 no   45.0  91.1  0.123  0.135 0.012  6  0 no  0.239  0  0 
       2 52 GLU QG  38 no   40.0  57.9  0.039  0.067 0.028  9  0 no  0.410  0  0 
       2 53 PHE QB  49 no   70.0  18.1  0.017  0.095 0.077  7  4 no  0.451  0  0 
       2 53 PHE QD  83 no   70.0  70.8  8.305 11.736 3.431  3  0 yes 4.477 28 33 
       2 53 PHE QE  95 no   70.0  29.1  0.333  1.144 0.811  1  0 yes 1.643 11 12 
       2 54 GLU QB  73 no   40.0  99.7  0.012  0.012 0.000  4  0 no  0.018  0  0 
       2 54 GLU QG  88 no  100.0  98.6  0.600  0.608 0.009  2  0 no  0.179  0  0 
       2 55 GLY QA  72 no  100.0   0.0  0.000  0.008 0.008  4  0 no  0.199  0  0 
       2 56 ARG QB  47 no   95.0  90.5  1.182  1.306 0.125  7  1 no  0.850  0  4 
       2 56 ARG QD  52 no  100.0  96.7  2.731  2.825 0.095  7  6 no  0.451  0  0 
       2 56 ARG QG  59 no   95.0  93.8  0.013  0.014 0.001  6  1 no  0.216  0  0 
       2 57 LYS QB  71 no   90.0  93.5  0.074  0.080 0.005  4  0 no  0.601  0  1 
       2 57 LYS QD  67 no    5.0  88.5  0.001  0.001 0.000  5  2 no  0.042  0  0 
       2 57 LYS QE  60 no   90.0  93.0  0.345  0.371 0.026  6  2 no  0.427  0  0 
       2 57 LYS QG  94 no  100.0 100.0  0.000  0.000 0.000  1  0 no  0.095  0  0 
       2 58 TYR QB  70 no  100.0 100.0  0.253  0.253 0.000  4  0 no  0.000  0  0 
       2 58 TYR QD  43 yes  80.0  73.7 12.691 17.228 4.537  8  0 yes 3.380 21 25 
       2 58 TYR QE  61 yes  80.0  63.6  5.394  8.486 3.092  5  0 yes 3.594 10 12 
       2 59 CYS QB  55 no   90.0  82.8  0.132  0.160 0.027  6  0 no  0.203  0  0 
       2 60 GLU QB  54 no  100.0  65.2  0.218  0.334 0.116  6  0 no  0.419  0  0 
       2 60 GLU QG  53 no  100.0  90.3  2.190  2.426 0.236  6  0 no  0.561  0  2 
       2 61 HIS QB  42 no  100.0  99.3  3.649  3.674 0.025  8  0 no  0.207  0  0 
       2 62 ASP QB  69 yes 100.0  87.5  0.509  0.582 0.073  4  0 no  0.415  0  0 
       2 63 PHE QB  82 no  100.0   0.0  0.000  0.000 0.000  3  0 no  0.000  0  0 
       2 63 PHE QD  58 no   90.0  87.2  8.249  9.457 1.207  6  1 yes 3.909  3  8 
       2 64 GLN QB  37 no   75.0  85.8  0.644  0.750 0.106  9  0 no  0.467  0  0 
       2 64 GLN QE  93 no   95.0  99.8  0.017  0.017 0.000  1  0 no  0.327  0  0 
       2 65 MET QG  81 no   50.0  97.3  0.365  0.375 0.010  3  0 no  0.228  0  0 
       2 66 LEU QD  40 no  100.0 100.0  0.049  0.049 0.000  9  1 no  0.000  0  0 
       2 67 PHE QB  68 no  100.0 100.0  0.250  0.250 0.000  4  0 no  0.000  0  0 
       2 67 PHE QD  80 no   70.0  51.1  6.840 13.375 6.535  3  0 yes 4.685 26 30 
       2 67 PHE QE  92 no   70.0  58.5  4.946  8.455 3.509  1  0 yes 4.486 13 13 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Thursday, May 16, 2024 4:10:37 PM GMT (wattos1)