NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
440231 2k7z 15932 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2k7z


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        124
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       10
    _Stereo_assign_list.Deassign_percentage  8.1
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   37.151
    _Stereo_assign_list.Total_e_high_states  374.886
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  11 LYS QB  120 no  95.0  99.2  0.899  0.906 0.007  2 0 no  0.230  0  0 
       1  11 LYS QG  119 no 100.0   0.0  0.000  0.010 0.010  2 0 no  0.455  0  0 
       1  12 VAL QG   32 no 100.0   0.0  0.000  0.015 0.015  8 2 no  0.291  0  0 
       1  14 GLN QG   71 no 100.0   0.0  0.000  0.025 0.025  4 0 no  0.438  0  0 
       1  17 SER QB   70 no 100.0   0.0  0.000  0.002 0.002  4 0 no  0.163  0  0 
       1  19 PRO QB  118 no 100.0   0.0  0.000  0.017 0.017  2 0 no  0.317  0  0 
       1  22 TYR QD   40 no 100.0  99.5 18.957 19.044 0.087  7 2 no  0.746  0  1 
       1  22 TYR QE  117 no  60.0  96.5  1.621  1.680 0.058  2 0 no  0.981  0  1 
       1  24 LEU QB   69 no 100.0   0.0  0.000  0.001 0.001  4 0 no  0.107  0  0 
       1  24 LEU QD   31 no   0.0   0.0  0.000  0.009 0.009  8 2 no  0.186  0  0 
       1  26 ILE QG   79 no 100.0  98.6  1.416  1.437 0.020  3 0 no  0.633  0  1 
       1  27 ASN QB   68 no 100.0   0.0  0.000  0.000 0.000  4 0 no  0.000  0  0 
       1  28 ASN QB  116 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000  0  0 
       1  30 ASN QD  115 no 100.0   0.0  0.000  0.019 0.019  2 0 no  0.615  0  1 
       1  33 LYS QB  114 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.056  0  0 
       1  33 LYS QG  113 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000  0  0 
       1  35 ARG QH1 112 no 100.0   0.0  0.000  0.018 0.018  2 0 no  0.463  0  0 
       1  37 LYS QG  111 no 100.0   0.0  0.000  0.005 0.005  2 0 no  0.328  0  0 
       1  38 VAL QG   67 no   0.0   0.0  0.000  0.028 0.028  4 0 no  0.344  0  0 
       1  41 LEU QB  110 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000  0  0 
       1  41 LEU QD   13 no 100.0  99.3  3.159  3.180 0.021 11 0 no  0.282  0  0 
       1  45 ARG QD  109 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000  0  0 
       1  45 ARG QG  108 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.007  0  0 
       1  52 LEU QB   66 no 100.0   0.0  0.000  0.023 0.023  4 0 no  0.480  0  0 
       1  61 PHE QD   37 no  70.0  41.2  5.510 13.386 7.876  7 0 yes 3.371 43 50 
       1  61 PHE QE   78 no  30.0  18.9  0.269  1.418 1.149  3 0 yes 1.404 12 19 
       1  62 GLU QB   47 no 100.0   0.0  0.000  0.011 0.011  6 0 no  0.255  0  0 
       1  63 GLU QG   12 no 100.0  90.8  1.424  1.569 0.145 11 0 no  0.736  0  4 
       1  64 LEU QD   35 no 100.0   0.0  0.000  3.784 3.784  8 6 yes 2.983 16 19 
       1  66 PHE QD   52 no  50.0  10.6  0.903  8.526 7.622  5 2 yes 3.699 19 27 
       1  66 PHE QE  107 no  50.0  12.3  0.746  6.072 5.325  2 0 yes 3.985 16 17 
       1  67 GLU QB   24 no 100.0  94.5  1.077  1.139 0.062  9 2 no  0.746  0  2 
       1  72 ASP QB   65 no 100.0   0.0  0.000  0.001 0.001  4 0 no  0.142  0  0 
       1  74 CYS QB   64 no 100.0   0.0  0.000  0.013 0.013  4 0 no  0.479  0  0 
       1  76 VAL QG    5 no  95.0   0.0  0.000  0.061 0.061 16 8 no  0.404  0  0 
       1  77 GLU QB  106 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000  0  0 
       1  80 TYR QD   14 no 100.0  99.9 41.379 41.434 0.055 11 1 no  0.345  0  0 
       1  80 TYR QE   39 no 100.0  99.9 30.693 30.730 0.037  7 2 no  0.480  0  0 
       1  83 LEU QB   63 no 100.0   0.0  0.000  0.000 0.000  4 0 no  0.000  0  0 
       1  84 LYS QG   62 no 100.0   0.0  0.000  0.000 0.000  4 0 no  0.000  0  0 
       1  86 TYR QD   29 no 100.0  99.9 21.235 21.255 0.020  8 1 no  0.223  0  0 
       1  86 TYR QE   15 no 100.0  99.9 41.629 41.661 0.033 11 2 no  0.323  0  0 
       1  88 LEU QB   23 no 100.0 100.0  2.008  2.009 0.000  9 2 no  0.066  0  0 
       1  88 LEU QD  105 no 100.0   0.0  0.000  0.011 0.011  2 0 no  0.164  0  0 
       1  89 MET QB    9 no 100.0  97.4  1.067  1.095 0.028 12 0 no  0.291  0  0 
       1  89 MET QG    6 no 100.0  95.8  2.972  3.100 0.129 15 3 no  0.430  0  0 
       1  91 HIS QB  104 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000  0  0 
       1  95 ASP QB  103 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000  0  0 
       1  96 CYS QB   61 no   0.0   0.0  0.000  0.011 0.011  4 0 no  0.219  0  0 
       1  97 PHE QB  102 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000  0  0 
       1  97 PHE QD  124 no  75.0  60.7  0.912  1.504 0.592  1 0 yes 2.014  3  5 
       1 100 CYS QB   60 no 100.0   0.0  0.000  0.002 0.002  4 0 no  0.151  0  0 
       1 104 HIS QB  101 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000  0  0 
       1 106 ASP QB   59 no 100.0   0.0  0.000  0.001 0.001  4 0 no  0.109  0  0 
       1 107 LYS QG  100 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000  0  0 
       1 109 ILE QG   46 no 100.0   0.0  0.000  0.036 0.036  6 0 no  0.397  0  0 
       1 111 TYR QB   99 no 100.0   0.0  0.000  0.016 0.016  2 0 no  0.382  0  0 
       1 111 TYR QD   58 no  85.0  90.2  0.981  1.088 0.106  4 0 yes 1.375  1  1 
       1 114 ASP QB   57 no 100.0   0.0  0.000  0.002 0.002  4 0 no  0.223  0  0 
       1 116 GLN QB   74 no 100.0   0.0  0.000  0.000 0.000  4 4 no  0.043  0  0 
       1 116 GLN QG   21 no 100.0   0.0  0.000  0.029 0.029 10 4 no  0.337  0  0 
       1 121 TYR QB   38 no 100.0  99.6  2.552  2.563 0.011  7 1 no  0.342  0  0 
       1 121 TYR QD   77 no 100.0  99.9  2.302  2.305 0.003  3 0 no  0.180  0  0 
       1 121 TYR QE  121 no 100.0  99.9  2.599  2.602 0.003  2 1 no  0.164  0  0 
       1 123 LEU QD    1 no 100.0  99.7  5.662  5.681 0.019 22 3 no  0.240  0  0 
       1 125 SER QB   98 no   0.0   0.0  0.000  0.006 0.006  2 0 no  0.175  0  0 
       1 129 GLY QA   17 no 100.0  98.5  5.350  5.432 0.082 10 0 no  0.616  0  1 
       1 130 LEU QB   28 no 100.0  99.7  4.402  4.415 0.013  8 0 no  0.255  0  0 
       1 130 LEU QD   56 no 100.0   0.0  0.000  0.001 0.001  4 0 no  0.096  0  0 
       1 131 LYS QG   36 no 100.0  99.7  1.959  1.965 0.005  7 0 no  0.170  0  0 
       1 135 LEU QB   97 no 100.0   0.0  0.000  0.010 0.010  2 0 no  0.249  0  0 
       1 135 LEU QD   45 no   0.0   0.0  0.000  0.003 0.003  6 0 no  0.136  0  0 
       1 139 PRO QB   96 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000  0  0 
       1 139 PRO QG   95 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000  0  0 
       1 141 VAL QG    8 no   0.0   0.0  0.000  0.007 0.007 12 0 no  0.192  0  0 
       1 143 PHE QD   44 no 100.0 100.0  8.483  8.484 0.001  6 0 no  0.105  0  0 
       1 143 PHE QE   11 no 100.0  99.9 47.462 47.491 0.029 12 4 no  0.250  0  0 
       1 156 ILE QG   30 no  95.0  96.1  0.672  0.699 0.027  8 2 no  0.595  0  1 
       1 157 PRO QB   94 no 100.0  99.6  2.312  2.322 0.010  2 0 no  0.238  0  0 
       1 157 PRO QD    7 no 100.0  99.4  4.444  4.470 0.026 13 4 no  0.527  0  1 
       1 158 VAL QG   22 no 100.0  99.7  1.708  1.712 0.004  9 2 no  0.294  0  0 
       1 159 GLU QB   93 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000  0  0 
       1 163 GLU QB   92 no 100.0   0.0  0.000  0.052 0.052  2 0 no  0.591  0  2 
       1 167 TYR QD   51 no 100.0  80.7  3.667  4.547 0.880  5 0 yes 1.045  7 18 
       1 167 TYR QE  123 no 100.0   0.0  0.000  0.000 0.000  1 0 no  0.000  0  0 
       1 168 LEU QD   27 no 100.0   0.0  0.000  0.090 0.090  8 0 no  0.547  0  1 
       1 170 MET QG   91 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000  0  0 
       1 172 LEU QD   20 no 100.0   0.0  0.000  0.018 0.018 10 4 no  0.412  0  0 
       1 176 GLN QB   73 no 100.0   0.0  0.000  0.000 0.000  4 4 no  0.000  0  0 
       1 179 TYR QD   43 no  70.0  57.3  6.733 11.754 5.020  6 0 yes 3.825 46 50 
       1 179 TYR QE   76 no  70.0  68.0  5.907  8.692 2.785  3 0 yes 3.553 29 32 
       1 183 GLU QG   90 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000  0  0 
       1 187 LEU QD   16 no   0.0   0.0  0.000  0.036 0.036 10 0 no  0.567  0  1 
       1 212 LEU QD   19 no   0.0   0.0  0.000  0.010 0.010 10 2 no  0.250  0  0 
       1 213 CYS QB   89 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000  0  0 
       1 216 LEU QD   50 no 100.0  99.5  4.537  4.559 0.022  5 0 no  0.280  0  0 
       1 217 ARG QD   26 no 100.0   0.0  0.000  0.014 0.014  8 0 no  0.391  0  0 
       1 217 ARG QG   55 no 100.0   0.0  0.000  0.002 0.002  4 0 no  0.147  0  0 
       1 220 CYS QB   88 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.062  0  0 
       1 221 PRO QD   49 no 100.0   0.0  0.000  0.018 0.018  6 4 no  0.000  0  0 
       1 221 PRO QG   87 no 100.0   0.0  0.000  0.056 0.056  2 0 no  0.510  0  1 
       1 222 ARG QB   18 no 100.0  95.6  0.605  0.633 0.028 10 2 no  0.518  0  1 
       1 222 ARG QD  122 no 100.0   0.0  0.000  0.000 0.000  2 2 no  0.063  0  0 
       1 223 GLY QA   54 no 100.0   0.0  0.000  0.003 0.003  4 0 no  0.200  0  0 
       1 225 ASP QB   34 no 100.0   0.0  0.000  0.018 0.018  8 4 no  0.387  0  0 
       1 227 LEU QB   48 no 100.0   0.0  0.000  0.000 0.000  6 4 no  0.015  0  0 
       1 227 LEU QD   33 no 100.0   0.0  0.000  0.001 0.001  8 4 no  0.131  0  0 
       1 230 LEU QB   86 no   0.0   0.0  0.000  0.023 0.023  2 0 no  0.483  0  0 
       1 230 LEU QD   72 no 100.0   0.0  0.000  0.008 0.008  4 2 no  0.226  0  0 
       1 233 VAL QG   53 no 100.0   0.0  0.000  0.000 0.000  4 0 no  0.000  0  0 
       1 255 PHE QB   25 no 100.0  95.9  0.994  1.037 0.043  8 0 no  0.255  0  0 
       1 257 LEU QB   85 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.027  0  0 
       1 257 LEU QD    4 no 100.0  99.7  9.003  9.027 0.024 17 1 no  0.309  0  0 
       1 258 ARG QB   84 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.021  0  0 
       1 258 ARG QG   83 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000  0  0 
       1 259 LYS QB   82 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.057  0  0 
       1 260 LYS QG    3 no 100.0  97.1  4.341  4.471 0.130 19 2 no  0.510  0  1 
       1 261 LEU QD    2 no 100.0  99.6  4.980  5.000 0.020 19 1 no  0.232  0  0 
       1 262 VAL QG   10 no 100.0   0.0  0.000  0.026 0.026 12 4 no  0.387  0  0 
       1 263 PHE QB   81 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000  0  0 
       1 263 PHE QD   42 no 100.0  99.9 15.041 15.053 0.012  6 0 no  0.298  0  0 
       1 263 PHE QE   41 no 100.0  99.9 11.344 11.359 0.016  6 0 no  0.384  0  0 
       1 264 PRO QB   75 no 100.0  99.5  1.821  1.829 0.009  3 0 no  0.362  0  0 
       1 265 SER QB   80 no 100.0   0.0  0.000  0.000 0.000  2 0 no  0.000  0  0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Friday, May 17, 2024 12:50:11 AM GMT (wattos1)