NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
409002 1z66 5971 cing 4-filtered-FRED Wattos check stereo assignment distance


data_1z66


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        127
    _Stereo_assign_list.Swap_count           37
    _Stereo_assign_list.Swap_percentage      29.1
    _Stereo_assign_list.Deassign_count       29
    _Stereo_assign_list.Deassign_percentage  22.8
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   61.297
    _Stereo_assign_list.Total_e_high_states  319.257
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  5 TYR QB 123 no  100.0  99.9  0.610  0.611 0.000  2  1 no  0.096  0  0 
       1  7 VAL QG  35 no   85.0  79.4 19.336 24.351 5.015 14  6 yes 2.149 20 27 
       1  8 CYS QB  27 no   55.0  30.2  1.109  3.665 2.557 16  8 yes 1.440 23 76 
       1  9 ASP QB  64 no  100.0  83.1  3.338  4.017 0.679 10  4 yes 1.272  1  5 
       1 10 LYS QB  39 no   80.0  99.4  0.290  0.291 0.002 14  8 no  0.114  0  0 
       1 10 LYS QD  85 no  100.0  96.0  0.148  0.154 0.006  8  7 no  0.022  0  0 
       1 10 LYS QE 110 no   50.0  65.5  0.319  0.486 0.168  5  4 yes 1.127  6 10 
       1 10 LYS QG  37 yes  80.0  87.6  2.328  2.658 0.330 14  7 yes 1.611  3  4 
       1 12 LYS QB  17 yes 100.0  87.8  5.045  5.745 0.699 18  8 yes 1.376 10 24 
       1 12 LYS QD  90 no   60.0  41.2  0.177  0.430 0.253  7  4 yes 1.138  3  8 
       1 12 LYS QE 122 yes  95.0  70.2  0.178  0.254 0.076  3  3 no  0.979  0  1 
       1 12 LYS QG  91 no   75.0  12.4  0.036  0.291 0.255  7  5 no  0.801  0  5 
       1 13 PHE QB  57 yes  90.0  77.2  1.883  2.439 0.555 11  5 yes 1.377  2  4 
       1 15 TRP QB  86 no  100.0  99.0  1.513  1.528 0.015  7  1 no  0.000  0  0 
       1 16 LYS QB  12 no  100.0  86.8  6.836  7.877 1.041 21 13 yes 1.550  2 23 
       1 16 LYS QD 112 no   65.0  21.8  0.106  0.486 0.380  5  5 no  0.536  0  3 
       1 16 LYS QE 121 no   40.0  74.0  0.059  0.080 0.021  3  3 no  0.012  0  0 
       1 16 LYS QG  74 no   70.0  24.7  0.441  1.784 1.344  9  6 yes 1.268  6 28 
       1 17 ARG QB  48 yes  90.0  70.8  0.872  1.231 0.359 13  8 yes 1.398  1  2 
       1 17 ARG QD 109 no   55.0  97.0  0.027  0.027 0.001  5  4 no  0.175  0  0 
       1 17 ARG QG  99 no   50.0  34.7  0.032  0.092 0.060  6  4 no  0.480  0  0 
       1 19 PRO QB  82 yes 100.0  96.7  1.122  1.160 0.038  8  4 no  0.490  0  0 
       1 19 PRO QD  65 no  100.0  92.3  4.938  5.351 0.412 10  6 no  0.390  0  0 
       1 19 PRO QG  25 no  100.0  37.2  2.453  6.600 4.147 16  7 no  0.926  0  6 
       1 21 ASP QB 105 no   35.0  79.6  0.116  0.145 0.030  5  1 no  0.284  0  0 
       1 22 SER QB  73 no  100.0  98.1  1.461  1.488 0.028  9  4 no  0.231  0  0 
       1 23 GLY QA 114 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1 24 HIS QB  93 no   50.0   0.9  0.000  0.005 0.005  6  0 no  0.107  0  0 
       1 25 ASP QB  92 no   30.0  17.6  0.002  0.009 0.008  6  0 no  0.221  0  0 
       1 27 VAL QG   6 yes 100.0  95.6  7.731  8.090 0.359 28  6 yes 0.877  0 19 
       1 28 VAL QG   2 no  100.0  86.4 11.976 13.863 1.887 30  8 yes 0.598  0 19 
       1 29 MET QB  10 yes 100.0  51.8  1.909  3.685 1.777 23 11 no  0.232  0  0 
       1 29 MET QG  13 yes  95.0  49.2  1.875  3.813 1.939 21 14 yes 1.293  1 18 
       1 30 GLU QB  26 yes 100.0  93.1  1.312  1.408 0.097 16  8 no  0.363  0  0 
       1 30 GLU QG  34 no   60.0  35.4  1.078  3.046 1.968 14  6 yes 1.739 13 25 
       1 31 VAL QG   4 no  100.0  91.9 11.737 12.773 1.036 29 15 no  0.935  0  7 
       1 32 GLY QA  87 no  100.0  52.7  0.217  0.412 0.195  7  2 no  0.536  0  3 
       1 33 PHE QB  72 yes  85.0  48.0  1.315  2.740 1.425  9  4 yes 1.225  2 11 
       1 35 GLY QA 103 no   70.0  68.1  0.048  0.071 0.023  5  0 no  0.348  0  0 
       1 37 ARG QB 118 no   90.0  95.9  0.035  0.037 0.002  4  2 no  0.066  0  0 
       1 37 ARG QG 115 yes 100.0 100.0  2.020  2.020 0.001  4  1 no  0.072  0  0 
       1 38 PRO QB  41 yes 100.0  91.4  1.113  1.217 0.104 14  9 no  0.728  0  4 
       1 38 PRO QD 111 no  100.0 100.0  0.010  0.010 0.000  5  5 no  0.000  0  0 
       1 38 PRO QG  59 no  100.0  99.6  2.533  2.544 0.011 11  9 no  0.142  0  0 
       1 39 CYS QB  24 yes  85.0  20.3  0.192  0.948 0.756 16  3 yes 0.867  0 27 
       1 40 ARG QB  28 no   90.0  38.5  3.168  8.231 5.063 16  9 yes 1.186  5 19 
       1 40 ARG QD  97 no   30.0  18.6  0.146  0.787 0.641  6  3 yes 1.798  6  6 
       1 40 ARG QG 108 no   35.0  54.3  0.006  0.012 0.005  5  4 no  0.000  0  0 
       1 42 PRO QB  55 yes 100.0  78.8  7.115  9.034 1.920 12  9 no  0.314  0  0 
       1 42 PRO QD  68 yes 100.0  46.4  1.133  2.439 1.306 10  7 no  0.000  0  0 
       1 42 PRO QG  23 yes 100.0  79.8  5.286  6.620 1.335 17 14 yes 1.983  6  6 
       1 43 VAL QG  20 no   95.0  98.4  3.636  3.694 0.058 17  8 no  0.846  0  1 
       1 44 ARG QB  36 no  100.0  99.9  0.216  0.216 0.000 14  7 no  0.038  0  0 
       1 44 ARG QD  83 no  100.0  99.9  0.220  0.220 0.000  8  6 no  0.038  0  0 
       1 44 ARG QG   7 yes 100.0  91.8  6.544  7.128 0.584 28 15 yes 0.869  0 20 
       1 46 VAL QG  14 no  100.0  99.9 10.190 10.201 0.011 20  6 no  0.081  0  0 
       1 48 HIS QB 102 no   40.0  33.1  0.124  0.374 0.250  5  0 no  0.998  0  8 
       1 49 GLY QA  96 yes 100.0  99.9  0.809  0.810 0.000  6  2 no  0.069  0  0 
       1 50 VAL QG  60 no  100.0 100.0  3.291  3.291 0.000 10  1 no  0.000  0  0 
       1 51 PRO QB  43 no  100.0  97.5  0.074  0.076 0.002 14 12 no  0.222  0  0 
       1 51 PRO QD  46 no  100.0  97.5  1.859  1.907 0.048 13  7 no  0.222  0  0 
       1 51 PRO QG  32 yes 100.0  82.3  4.246  5.161 0.915 15 13 no  0.266  0  0 
       1 52 GLU QB  50 no   95.0  97.9  0.381  0.390 0.008 12  4 no  0.136  0  0 
       1 52 GLU QG  89 no   85.0  94.8  1.000  1.054 0.054  7  4 no  0.731  0  1 
       1 53 VAL QG  79 no  100.0  99.4  7.479  7.526 0.047  8  3 no  0.731  0  1 
       1 54 ASN QB  63 no  100.0   0.0  0.000  0.000 0.000 10  4 no  0.000  0  0 
       1 54 ASN QD  62 yes 100.0 100.0  0.419  0.419 0.000 10  4 no  0.019  0  0 
       1 55 VAL QG   5 no  100.0  99.8  4.511  4.518 0.007 28  3 no  0.137  0  0 
       1 57 MET QB  78 no   60.0  85.4  1.121  1.312 0.191  8  3 no  0.918  0  8 
       1 57 MET QG 107 no   60.0  64.0  0.102  0.159 0.057  5  3 no  0.564  0  2 
       1 58 LEU QB  18 yes 100.0  97.4  1.198  1.230 0.032 18  9 no  0.395  0  0 
       1 58 LEU QD   3 no  100.0  95.1 10.124 10.645 0.522 30 11 no  0.060  0  0 
       1 59 ILE QG   8 yes 100.0  87.9  4.221  4.800 0.579 23  6 no  0.293  0  0 
       1 61 PRO QB  67 yes 100.0  91.1  0.135  0.148 0.013 10  7 no  0.168  0  0 
       1 61 PRO QD  30 yes 100.0  97.3  0.225  0.231 0.006 15  7 no  0.183  0  0 
       1 61 PRO QG  84 no  100.0  96.3  0.352  0.365 0.013  8  7 no  0.168  0  0 
       1 62 ASN QB  95 no   60.0  76.3  0.008  0.010 0.002  6  2 no  0.096  0  0 
       1 62 ASN QD 125 no  100.0 100.0  0.002  0.002 0.000  2  2 no  0.096  0  0 
       1 63 PRO QB  71 no   60.0  86.5  0.019  0.022 0.003  9  4 no  0.237  0  0 
       1 63 PRO QD  38 yes 100.0  93.5  0.536  0.573 0.037 14  8 no  0.846  0  1 
       1 63 PRO QG  19 no   95.0  52.4  0.020  0.038 0.018 18 12 no  0.421  0  0 
       1 65 MET QB  53 no   65.0  32.8  1.931  5.896 3.965 12  6 yes 2.183 32 59 
       1 65 MET QG 117 no  100.0 100.0  0.012  0.012 0.000  4  2 no  0.317  0  0 
       1 66 GLU QB  58 yes 100.0  71.2  1.565  2.198 0.633 11  7 no  0.462  0  0 
       1 66 GLU QG  69 no   70.0  32.1  0.085  0.264 0.179 10  8 no  0.474  0  0 
       1 67 ASN QB 106 no    5.0 100.0  0.000  0.000 0.000  5  2 no  0.000  0  0 
       1 67 ASN QD  98 yes 100.0  97.8  2.389  2.443 0.053  6  4 no  0.580  0  2 
       1 68 ASN QB 116 no   50.0  62.5  0.046  0.074 0.028  4  2 no  0.396  0  0 
       1 68 ASN QD 120 no   35.0  71.4  0.285  0.400 0.114  4  4 no  0.580  0  2 
       1 69 GLY QA  77 no  100.0  99.1  1.812  1.829 0.017  8  3 no  0.297  0  0 
       1 70 GLY QA  52 no  100.0  98.3  0.414  0.421 0.007 12  6 no  0.195  0  0 
       1 71 GLY QA  76 no  100.0   0.0  0.000  0.000 0.000  8  2 no  0.097  0  0 
       1 72 PHE QB 104 no   55.0  85.9  0.377  0.438 0.062  5  1 no  0.404  0  0 
       1 73 ILE QG  29 yes 100.0  99.7  6.179  6.197 0.018 15  5 no  0.195  0  0 
       1 74 GLU QB  56 no  100.0  92.6  1.941  2.097 0.156 11  5 no  0.659  0  2 
       1 74 GLU QG  66 yes 100.0  80.1  0.538  0.672 0.134 10  7 no  0.659  0  2 
       1 75 MET QB  22 yes 100.0  51.6  2.672  5.174 2.503 17 10 no  0.237  0  0 
       1 75 MET QG  54 no   70.0  65.5  0.038  0.058 0.020 12  8 no  0.229  0  0 
       1 76 GLN QB  21 no   70.0  45.5  1.074  2.361 1.287 17  9 no  0.587  0  3 
       1 76 GLN QE  47 yes 100.0  94.0  3.425  3.646 0.220 13  8 no  0.985  0  4 
       1 76 GLN QG  51 no   70.0  85.1  0.489  0.575 0.086 12  6 yes 1.159  1 17 
       1 79 PRO QB  81 no  100.0  79.2  0.025  0.031 0.006  8  4 no  0.245  0  0 
       1 79 PRO QD 100 yes 100.0  99.9  2.009  2.012 0.003  6  6 no  0.101  0  0 
       1 79 PRO QG 127 no  100.0   0.0  0.000  0.000 0.000  1  1 no  0.000  0  0 
       1 80 GLY QA 101 no  100.0  95.2  0.023  0.024 0.001  5  0 no  0.306  0  0 
       1 81 ASP QB  61 no   90.0  76.0  2.185  2.874 0.689 10  4 yes 1.526  3 14 
       1 82 ASN QB  33 no  100.0  93.9  2.106  2.244 0.137 14  6 no  0.168  0  0 
       1 82 ASN QD 119 no   90.0  88.7  2.173  2.448 0.275  4  4 no  0.985  0  4 
       1 83 ILE QG  70 no   70.0  96.2  0.054  0.056 0.002  9  3 no  0.151  0  0 
       1 84 ILE QG  31 yes 100.0  93.1 14.486 15.563 1.077 15 11 no  0.490  0  0 
       1 85 TYR QB  44 yes 100.0  99.4  0.177  0.178 0.001 13  5 no  0.116  0  0 
       1 85 TYR QE 126 no  100.0  99.9  4.514  4.520 0.006  1  0 no  0.105  0  0 
       1 86 VAL QG  11 no  100.0  99.6  2.870  2.881 0.010 22  9 no  0.273  0  0 
       1 87 GLY QA  40 yes 100.0  63.5  1.015  1.598 0.584 14  9 yes 0.631  0 13 
       1 88 ASP QB 113 no  100.0 100.0  0.001  0.001 0.000  4  0 no  0.110  0  0 
       1 89 LEU QB   9 yes 100.0  96.6  5.550  5.743 0.193 23  7 yes 1.303  2  3 
       1 89 LEU QD   1 no   40.0   9.0  0.041  0.453 0.412 33 11 no  0.935  0  6 
       1 90 ASN QB  49 no  100.0  39.2  0.063  0.162 0.098 12  1 no  0.490  0  0 
       1 91 HIS QB  75 no   85.0  78.7  1.259  1.600 0.341  8  2 yes 1.374  2  6 
       1 92 GLN QB  45 no  100.0 100.0  0.006  0.006 0.000 13  7 no  0.190  0  0 
       1 92 GLN QE 124 no  100.0   0.0  0.000  0.000 0.000  2  2 no  0.000  0  0 
       1 92 GLN QG  42 no   70.0  70.2  0.274  0.390 0.116 14 10 no  0.390  0  0 
       1 93 TRP QB  94 no   80.0  85.3  0.535  0.627 0.092  6  1 no  0.149  0  0 
       1 94 PHE QB  88 no   30.0  12.5  0.070  0.561 0.491  7  4 yes 1.080  1  3 
       1 95 GLN QB  16 no  100.0  80.0  8.526 10.658 2.132 18  7 no  0.141  0  0 
       1 95 GLN QE  80 no  100.0  99.6  3.020  3.031 0.011  8  4 no  0.154  0  0 
       1 95 GLN QG  15 no   70.0  58.8  1.919  3.263 1.345 19 11 yes 2.448  6 16 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Saturday, May 18, 2024 9:41:21 PM GMT (wattos1)