NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
383702 1k3g 5597 cing 4-filtered-FRED Wattos check stereo assignment distance


data_1k3g


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        85
    _Stereo_assign_list.Swap_count           1
    _Stereo_assign_list.Swap_percentage      1.2
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          30
    _Stereo_assign_list.Total_e_low_states   0.904
    _Stereo_assign_list.Total_e_high_states  16.713
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  1 VAL QG 16 no  100.0   0.0 0.000 0.000 0.000 16  6 no 0.000 0 0 
       1  2 ASP QB 69 no  100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1  4 GLU QB 30 no  100.0   0.0 0.000 0.002 0.002 10  2 no 0.161 0 0 
       1  4 GLU QG 29 no  100.0   0.0 0.000 0.000 0.000 10  0 no 0.032 0 0 
       1  6 VAL QG  4 no  100.0 100.0 1.156 1.156 0.000 36 16 no 0.000 0 0 
       1  7 VAL QG  1 no  100.0 100.0 1.222 1.222 0.000 44 18 no 0.000 0 0 
       1  8 GLN QB 25 no  100.0  99.1 0.260 0.263 0.002 11  0 no 0.079 0 0 
       1  8 GLN QE 42 no  100.0   0.0 0.000 0.000 0.000  7  2 no 0.000 0 0 
       1  8 GLN QG 19 no   96.7  93.3 0.001 0.001 0.000 15  5 no 0.161 0 0 
       1  9 GLN QB 55 no  100.0   0.0 0.000 0.000 0.000  6  4 no 0.000 0 0 
       1  9 GLN QE 74 no  100.0   0.0 0.000 0.000 0.000  4  4 no 0.000 0 0 
       1 10 LYS QB 52 no  100.0   0.0 0.000 0.000 0.000  6  2 no 0.000 0 0 
       1 10 LYS QG 51 no  100.0   0.0 0.000 0.000 0.000  6  2 no 0.000 0 0 
       1 11 CYS QB 13 no  100.0 100.0 1.057 1.057 0.000 17  8 no 0.000 0 0 
       1 12 ILE QG 48 no  100.0   0.0 0.000 0.000 0.000  6  0 no 0.012 0 0 
       1 13 SER QB 84 no  100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 14 CYS QB 76 no    6.7 100.0 0.000 0.000 0.000  3  0 no 0.000 0 0 
       1 15 HIS QB  8 no  100.0  99.9 0.876 0.877 0.001 21  4 no 0.069 0 0 
       1 16 GLY QA 68 no  100.0   0.0 0.000 0.000 0.000  4  0 no 0.010 0 0 
       1 17 GLY QA 47 no  100.0 100.0 0.020 0.020 0.000  6  0 no 0.000 0 0 
       1 18 ASP QB 67 no  100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 19 LEU QB 35 no  100.0   0.0 0.000 0.000 0.000 10  4 no 0.000 0 0 
       1 19 LEU QD  7 no  100.0   0.0 0.000 0.000 0.000 24 14 no 0.000 0 0 
       1 21 GLY QA 22 no  100.0 100.0 1.169 1.170 0.000 13  0 no 0.034 0 0 
       1 23 SER QB 83 no  100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 25 PRO QB 82 no  100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 25 PRO QD 75 no  100.0   0.0 0.000 0.000 0.000  3  0 no 0.000 0 0 
       1 25 PRO QG 66 no  100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 27 ILE QG 11 no  100.0   0.0 0.000 0.000 0.000 18 16 no 0.000 0 0 
       1 28 ASP QB 28 no  100.0   0.0 0.000 0.000 0.000 10  0 no 0.021 0 0 
       1 29 LYS QB 65 no  100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 29 LYS QD 64 no  100.0   0.0 0.000 0.000 0.000  4  0 no 0.006 0 0 
       1 29 LYS QG 81 no  100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 31 GLY QA 26 no  100.0 100.0 2.259 2.259 0.000 11  2 no 0.004 0 0 
       1 33 ASN QB 40 no  100.0   0.0 0.000 0.000 0.000  8  0 no 0.000 0 0 
       1 33 ASN QD 63 no  100.0   0.0 0.000 0.000 0.000  4  0 no 0.043 0 0 
       1 34 TYR QB 10 no  100.0   0.0 0.000 0.000 0.000 18  8 no 0.045 0 0 
       1 34 TYR QE 85 no  100.0   0.0 0.000 0.000 0.000  1  0 no 0.000 0 0 
       1 35 SER QB 46 no  100.0   0.0 0.000 0.000 0.000  6  0 no 0.011 0 0 
       1 36 GLU QB 45 no  100.0   0.0 0.000 0.000 0.000  6  0 no 0.000 0 0 
       1 36 GLU QG 62 no  100.0   0.0 0.000 0.001 0.001  4  0 no 0.048 0 0 
       1 37 GLU QB 61 no  100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 37 GLU QG 80 no  100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 38 GLU QB 12 no  100.0 100.0 0.973 0.973 0.000 17  2 no 0.021 0 0 
       1 38 GLU QG 14 no  100.0   0.0 0.000 0.000 0.000 16  4 no 0.004 0 0 
       1 39 ILE QG 15 no  100.0   0.0 0.000 0.010 0.010 16  6 no 0.119 0 0 
       1 40 LEU QB 37 no  100.0 100.0 0.039 0.039 0.000  9  2 no 0.000 0 0 
       1 40 LEU QD  5 no  100.0 100.0 0.715 0.715 0.000 29 10 no 0.000 0 0 
       1 41 ASP QB 34 no  100.0   0.0 0.000 0.001 0.001 10  4 no 0.115 0 0 
       1 43 ILE QG 18 no  100.0 100.0 1.007 1.007 0.000 15  1 no 0.000 0 0 
       1 44 LEU QB 41 no  100.0   0.0 0.000 0.001 0.001  8  4 no 0.064 0 0 
       1 45 ASN QB 60 no   83.3  93.4 0.104 0.111 0.007  4  0 no 0.220 0 0 
       1 45 ASN QD 21 no  100.0   0.0 0.000 0.001 0.001 14  8 no 0.115 0 0 
       1 46 GLY QA  6 no  100.0  94.7 0.791 0.836 0.045 24  6 no 0.262 0 0 
       1 47 GLN QB 38 no  100.0   0.0 0.000 0.002 0.002  9  3 no 0.107 0 0 
       1 47 GLN QE 70 no  100.0   0.0 0.000 0.000 0.000  4  2 no 0.000 0 0 
       1 47 GLN QG 54 no  100.0   0.0 0.000 0.001 0.001  6  4 no 0.109 0 0 
       1 48 GLY QA 39 no  100.0  99.3 0.083 0.083 0.001  9  4 no 0.109 0 0 
       1 50 MET QB 53 no  100.0   0.0 0.000 0.000 0.000  6  4 no 0.000 0 0 
       1 50 MET QG 43 no   96.7  53.3 0.936 1.754 0.819  7  5 no 0.144 0 0 
       1 51 PRO QB 79 no  100.0   0.0 0.000 0.002 0.002  2  0 no 0.070 0 0 
       1 51 PRO QD 50 yes 100.0  99.9 0.818 0.819 0.001  6  2 no 0.144 0 0 
       1 52 GLY QA 33 no  100.0   0.0 0.000 0.000 0.000 10  4 no 0.005 0 0 
       1 53 GLY QA 44 no  100.0 100.0 0.098 0.098 0.000  6  0 no 0.000 0 0 
       1 54 ILE QG 59 no  100.0   0.0 0.000 0.000 0.000  4  0 no 0.011 0 0 
       1 56 LYS QB 36 no  100.0   0.0 0.000 0.000 0.000 10  8 no 0.049 0 0 
       1 56 LYS QD 78 no  100.0   0.0 0.000 0.000 0.000  2  0 no 0.008 0 0 
       1 56 LYS QE 73 no  100.0   0.0 0.000 0.000 0.000  4  4 no 0.000 0 0 
       1 56 LYS QG 58 no  100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 57 GLY QA 32 no  100.0   0.0 0.000 0.000 0.000 10  4 no 0.000 0 0 
       1 59 GLU QB  9 no   93.3  99.7 0.058 0.058 0.000 19  6 no 0.056 0 0 
       1 59 GLU QG 17 no  100.0   0.0 0.000 0.000 0.000 16 10 no 0.000 0 0 
       1 61 GLU QB 31 no   93.3  97.0 0.053 0.055 0.002 10  4 no 0.081 0 0 
       1 61 GLU QG 23 no   70.0  99.9 0.095 0.095 0.000 13  4 no 0.030 0 0 
       1 63 VAL QG  3 no  100.0 100.0 1.834 1.834 0.000 36 11 no 0.000 0 0 
       1 66 TRP QB 27 no  100.0   0.0 0.000 0.000 0.000 10  0 no 0.000 0 0 
       1 67 LEU QB 20 no   96.7  98.1 0.183 0.187 0.003 14  1 no 0.094 0 0 
       1 67 LEU QD  2 no  100.0   0.0 0.000 0.000 0.000 38 16 no 0.000 0 0 
       1 69 GLU QB 57 no  100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 69 GLU QG 77 no  100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 70 LYS QB 24 no  100.0   0.0 0.000 0.000 0.000 12  4 no 0.016 0 0 
       1 70 LYS QG 56 no  100.0   0.0 0.000 0.000 0.000  4  0 no 0.080 0 0 
       1 71 LYS QB 72 no  100.0   0.0 0.000 0.000 0.000  4  4 no 0.000 0 0 
       1 71 LYS QE 71 no  100.0   0.0 0.000 0.000 0.000  4  4 no 0.000 0 0 
       1 71 LYS QG 49 no  100.0   0.0 0.000 0.001 0.001  6  2 no 0.118 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Friday, May 10, 2024 6:16:26 PM GMT (wattos1)