NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing in_recoord stage program type subtype subsubtype
379779 1i42 5155 cing recoord 4-filtered-FRED Wattos check stereo assignment distance


data_1i42


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        64
    _Stereo_assign_list.Swap_count           1
    _Stereo_assign_list.Swap_percentage      1.6
    _Stereo_assign_list.Deassign_count       9
    _Stereo_assign_list.Deassign_percentage  14.1
    _Stereo_assign_list.Model_count          10
    _Stereo_assign_list.Total_e_low_states   81.369
    _Stereo_assign_list.Total_e_high_states  124.422
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  3 SER QB 53 no   70.0  99.3  0.028  0.028  0.000  2 0 no  0.044  0  0 
       1  7 LEU QD 27 no  100.0 100.0  4.707  4.709  0.002  5 0 no  0.078  0  0 
       1  8 ILE QG 52 no  100.0   0.0  0.000  0.000  0.000  2 0 no  0.000  0  0 
       1  9 ASN QB 25 no  100.0   0.0  0.000  0.001  0.001  6 0 no  0.075  0  0 
       1  9 ASN QD 42 no  100.0   0.0  0.000  0.001  0.001  4 0 no  0.070  0  0 
       1 10 GLU QB 26 no   70.0  98.6  0.034  0.034  0.000  5 0 no  0.053  0  0 
       1 13 PRO QB 51 no  100.0   0.0  0.000  0.376  0.376  2 0 yes 0.808  0  7 
       1 13 PRO QD 41 no  100.0   0.0  0.000  0.000  0.000  4 0 no  0.000  0  0 
       1 16 ASN QB 24 no  100.0   0.0  0.000  0.001  0.001  6 0 no  0.049  0  0 
       1 18 GLN QB 40 no  100.0   0.0  0.000  0.000  0.000  4 0 no  0.042  0  0 
       1 20 ARG QB 39 no  100.0   0.0  0.000  0.000  0.000  4 0 no  0.000  0  0 
       1 20 ARG QG 46 no  100.0   0.0  0.000  0.000  0.000  3 0 no  0.000  0  0 
       1 21 LEU QB  4 no   90.0  76.1  0.028  0.037  0.009 12 0 no  0.177  0  0 
       1 21 LEU QD 64 no  100.0   0.0  0.000  0.000  0.000  1 0 no  0.000  0  0 
       1 23 ASP QB 23 no  100.0   0.0  0.000  0.007  0.007  6 0 no  0.197  0  0 
       1 26 ARG QD 63 no   80.0 100.0  0.151  0.151  0.000  1 0 no  0.014  0  0 
       1 26 ARG QG 38 no   40.0  99.5  0.015  0.015  0.000  4 0 no  0.028  0  0 
       1 28 VAL QG 37 no    0.0   0.0  0.000  0.005  0.005  4 0 no  0.121  0  0 
       1 32 ASN QB  7 no  100.0   0.0  0.000  0.443  0.443 10 2 yes 0.772  0  6 
       1 33 HIS QB  6 no    0.0   0.0  0.000  0.280  0.280 10 0 no  0.834  0  4 
       1 34 SER QB 11 no  100.0   0.0  0.000  0.001  0.001  8 0 no  0.039  0  0 
       1 35 HIS QB  5 no   50.0   4.2  0.002  0.058  0.056 10 0 no  0.268  0  0 
       1 36 ARG QB  3 no   90.0   1.7  0.424 24.791 24.367 13 2 yes 2.942 20 20 
       1 36 ARG QG 17 no  100.0  98.8  0.385  0.389  0.005  7 1 no  0.068  0  0 
       1 37 ILE QG 13 no  100.0 100.0  1.195  1.195  0.000  8 2 no  0.018  0  0 
       1 39 ASP QB 36 no  100.0   0.0  0.000  0.000  0.000  4 0 no  0.021  0  0 
       1 41 ARG QG 35 no  100.0   0.0  0.000  0.000  0.000  4 0 no  0.027  0  0 
       1 42 LEU QD 62 no   40.0  82.4  0.114  0.138  0.024  1 0 no  0.360  0  0 
       1 43 PHE QB 10 no  100.0   0.0  0.000  0.000  0.000  8 0 no  0.034  0  0 
       1 45 VAL QG 61 no  100.0   0.0  0.000  0.000  0.000  1 0 no  0.000  0  0 
       1 46 ASP QB 15 no  100.0   0.0  0.000  0.000  0.000  7 0 no  0.001  0  0 
       1 48 ARG QB 50 no  100.0   0.0  0.000  0.006  0.006  2 0 no  0.138  0  0 
       1 48 ARG QD 22 no  100.0   0.0  0.000  0.001  0.001  6 0 no  0.051  0  0 
       1 49 PRO QD 44 no   70.0  84.9  0.024  0.028  0.004  4 2 no  0.171  0  0 
       1 49 PRO QG 56 no  100.0   0.0  0.000  0.000  0.000  2 2 no  0.000  0  0 
       1 51 MET QG 34 no   70.0  23.6  0.000  0.002  0.001  4 0 no  0.081  0  0 
       1 56 PHE QB  8 no  100.0   0.0  0.000  0.000  0.000  9 0 no  0.000  0  0 
       1 57 VAL QG 21 yes  80.0  26.2  1.662  6.348  4.686  6 0 yes 2.702 10 10 
       1 58 LEU QB 20 no  100.0 100.0  0.004  0.004  0.000  6 0 no  0.171  0  0 
       1 59 MET QB 49 no  100.0   0.0  0.000  0.000  0.000  2 0 no  0.000  0  0 
       1 62 PHE QB 14 no  100.0   0.0  0.000  0.009  0.009  7 0 no  0.114  0  0 
       1 63 PRO QB 55 no  100.0 100.0  0.282  0.282  0.000  2 2 no  0.016  0  0 
       1 63 PRO QD 28 no  100.0 100.0  0.187  0.187  0.000  5 4 no  0.016  0  0 
       1 63 PRO QG 54 no  100.0   0.0  0.000  0.000  0.000  2 2 no  0.000  0  0 
       1 65 LYS QB 33 no  100.0   0.0  0.000  0.000  0.000  4 0 no  0.000  0  0 
       1 67 LEU QB 19 no  100.0   0.0  0.000  0.000  0.000  6 0 no  0.000  0  0 
       1 67 LEU QD 60 no  100.0   0.0  0.000  0.000  0.000  1 0 no  0.000  0  0 
       1 69 ASP QB 18 no  100.0   0.0  0.000  0.001  0.001  6 0 no  0.062  0  0 
       1 70 GLU QB 45 no   50.0   5.9  1.287 21.671 20.383  3 0 yes 6.503 10 10 
       1 72 GLN QB 32 no  100.0   0.0  0.000  0.001  0.001  4 0 no  0.087  0  0 
       1 72 GLN QG 48 no  100.0   0.0  0.000  0.000  0.000  2 0 no  0.000  0  0 
       1 74 LEU QB 12 no   90.0   0.9  0.013  1.402  1.389  8 1 yes 1.506  6  9 
       1 74 LEU QD  2 no  100.0  92.8 13.488 14.533  1.045 27 7 yes 1.088  1 16 
       1 75 LYS QB 43 no   20.0  99.9  0.049  0.049  0.000  4 1 no  0.018  0  0 
       1 75 LYS QG 47 no   90.0  95.2  0.111  0.116  0.006  2 0 no  0.108  0  0 
       1 76 GLU QB 31 no   90.0  89.4  0.009  0.010  0.001  4 0 no  0.077  0  0 
       1 76 GLU QG 59 no   40.0  11.9  0.000  0.000  0.000  1 0 no  0.035  0  0 
       1 78 ASN QB 30 no  100.0  99.9  0.108  0.108  0.000  4 0 no  0.031  0  0 
       1 80 LEU QD  1 no   70.0  33.2 13.245 39.905 26.660 27 4 yes 5.418 28 29 
       1 81 ASN QB 16 no   80.0  99.3  0.067  0.067  0.000  7 1 no  0.054  0  0 
       1 83 VAL QG  9 no  100.0 100.0  4.592  4.592  0.000  9 1 no  0.011  0  0 
       1 85 VAL QG 58 no   50.0 100.0  0.075  0.075  0.000  1 0 no  0.000  0  0 
       1 87 ARG QB 29 no  100.0   0.0  0.000  1.596  1.596  4 0 yes 1.182  8 18 
       1 88 LEU QD 57 no   70.0  99.8  0.767  0.768  0.001  1 0 no  0.090  0  0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Tuesday, June 11, 2024 7:45:07 AM GMT (wattos1)