NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing in_recoord stage program type subtype subsubtype
379578 1hzk 4946 cing recoord 4-filtered-FRED Wattos check stereo assignment distance


data_1hzk


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        26
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          30
    _Stereo_assign_list.Total_e_low_states   0.038
    _Stereo_assign_list.Total_e_high_states  13.295
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   2 PRO QB 15 no 100.0  99.8 2.409 2.413 0.004 11  3 no 0.156 0 0 
       1   6 VAL QG  3 no  46.7 100.0 0.030 0.030 0.000 24  6 no 0.000 0 0 
       1  12 LEU QD  1 no  30.0 100.0 0.018 0.018 0.000 26  6 no 0.000 0 0 
       1  15 GLY QA 17 no 100.0  98.7 0.453 0.459 0.006  7  2 no 0.114 0 0 
       1  18 VAL QG 10 no 100.0 100.0 0.974 0.974 0.000 20  5 no 0.000 0 0 
       1  20 VAL QG  6 no 100.0 100.0 0.829 0.829 0.000 22  0 no 0.000 0 0 
       1  28 GLY QA 21 no 100.0   0.0 0.000 0.006 0.006  5  0 no 0.081 0 0 
       1  38 PRO QB 24 no 100.0 100.0 0.005 0.005 0.000  4  0 no 0.200 0 0 
       1  41 GLY QA 23 no 100.0  98.7 0.434 0.440 0.006  4  0 no 0.095 0 0 
       1  59 GLY QA 16 no 100.0  92.5 0.116 0.125 0.009  9  0 no 0.151 0 0 
       1  66 VAL QG 11 no 100.0 100.0 2.320 2.320 0.000 18  4 no 0.000 0 0 
       1  67 VAL QG  4 no 100.0 100.0 1.419 1.419 0.000 24 11 no 0.000 0 0 
       1  73 GLY QA 14 no  93.3 100.0 0.006 0.006 0.000 12  2 no 0.000 0 0 
       1  76 PRO QB 26 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1  82 GLY QA 20 no   0.0   0.0 0.000 0.004 0.004  6  0 no 0.112 0 0 
       1  84 VAL QG  7 no  96.7 100.0 0.121 0.121 0.000 22  2 no 0.000 0 0 
       1  92 ASN QD 25 no   3.3  66.9 0.000 0.000 0.000  3  0 no 0.006 0 0 
       1  93 LEU QD  2 no 100.0 100.0 1.342 1.342 0.000 24  2 no 0.000 0 0 
       1  94 GLY QA 13 no 100.0  99.9 1.837 1.839 0.001 12  1 no 0.100 0 0 
       1  96 GLY QA 19 no 100.0 100.0 0.000 0.000 0.000  6  0 no 0.015 0 0 
       1  97 ASN QD 22 no  76.7  97.8 0.005 0.005 0.000  4  0 no 0.246 0 0 
       1 100 LEU QD 12 no  40.0 100.0 0.110 0.110 0.000 12  1 no 0.000 0 0 
       1 102 LEU QD  5 no  90.0 100.0 0.600 0.600 0.000 23  4 no 0.000 0 0 
       1 103 GLY QA 18 no  13.3  94.1 0.024 0.026 0.002  6  0 no 0.076 0 0 
       1 105 VAL QG  9 no 100.0 100.0 0.113 0.113 0.000 21  2 no 0.000 0 0 
       1 107 LEU QD  8 no  86.7 100.0 0.091 0.091 0.000 22  5 no 0.000 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Sunday, May 19, 2024 10:22:44 AM GMT (wattos1)