NMR Restraints Grid |
Result table
image | mrblock_id | pdb_id | bmrb_id | cing | stage | program | type | subtype | subsubtype |
592875 | 2n2m | 25281 | cing | 4-filtered-FRED | Wattos | check | completeness | distance |
data_2n2m save_NOE_Completeness _NOE_completeness_stats.Sf_category NOE_completeness_statistics _NOE_completeness_stats.Model_count 10 _NOE_completeness_stats.Residue_count 156 _NOE_completeness_stats.Total_atom_count 2424 _NOE_completeness_stats.Observable_atom_definition ob_standard _NOE_completeness_stats.Observable_atom_count 848 _NOE_completeness_stats.Use_intra_residue_restraints no _NOE_completeness_stats.Redundancy_threshold_pct 5.0 _NOE_completeness_stats.Distance_averaging_power 1.00 _NOE_completeness_stats.Completeness_cutoff 4.00 _NOE_completeness_stats.Completeness_cumulative_pct 4.2 _NOE_completeness_stats.Constraint_unexpanded_count 223 _NOE_completeness_stats.Constraint_count 224 _NOE_completeness_stats.Constraint_exp_unfiltered_count 1167 _NOE_completeness_stats.Constraint_exceptional_count 0 _NOE_completeness_stats.Constraint_nonobservable_count 78 _NOE_completeness_stats.Constraint_intraresidue_count 0 _NOE_completeness_stats.Constraint_surplus_count 0 _NOE_completeness_stats.Constraint_observed_count 146 _NOE_completeness_stats.Constraint_expected_count 1167 _NOE_completeness_stats.Constraint_matched_count 49 _NOE_completeness_stats.Constraint_unmatched_count 97 _NOE_completeness_stats.Constraint_exp_nonobs_count 1118 _NOE_completeness_stats.Details ; A detailed methodology description is available at: http://nmr.cmbi.ru.nl/~jd/wattos/doc/Wattos/Soup/Constraint/dc_completeness.html Please note that the contributions in ambiguous restraints are considered separate 'restraints' for the sets defined below. The cut off for all statistics except those in the by-shell table is given below by the above tag: _NOE_completeness_stats.Completeness_cutoff Description of the tags in this list: * 1 * Administrative tag * 2 * Administrative tag * 3 * Administrative tag * 4 * Number of models * 5 * Number of residues * 6 * Number of atoms * 7 * Standard set name of observable atom definitions see: Doreleijers et al., J.Biomol.NMR 14, 123-132 (1999). * 8 * Observable atom(group)s * 9 * Include intra residue restraints * 10 * Surplus threshold for determining redundant restraints * 11 * Power for averaging the distance over models * 12 * Up to what distance are NOEs expected * 13 * Cumulative completeness percentage * 14 * Number of unexpanded restraints in restraint list. * 15 * Number of restraints in restraint list. Set U * 16 * Expected restraints based on criteria in list. Set V Set V differs from set B only if intra residue restraints are analyzed. * 17 * Exceptional restraints, i.e. with an unknown atom.Set E * 18 * Not observable NOEs with e.g. hydroxyl Ser HG. Set O Even though restraints with these atom types might have been observed they are excluded from the analysis. * 19 * Intra-residue restraints if not to be analyzed. Set I * 20 * Surplus like double restraints. Set S * 21 * Observed restraints. Set A = U - (E u O u I u S) * 22 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 23 * Observed restraints matched to the expected. Set M = A n B * 24 * Observed restraints that were not expected. Set C = A - M * 25 * Expected restraints that were not observed. Set D = B - M * 26 * This tag Description of the tags in the class table: * 1 * Class of restraint. Note that 'medium-range' involves (2<=i<=4) contacts. Possible values are: intraresidue,sequential,medium-range,long-range, and intermolecular. * 2 * Observed restraints. Set A = U - (E u O u I u S) * 3 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 4 * Observed restraints matched to the expected. Set M = A n B * 5 * Completeness percentage * 6 * Standard deviation from the average over the classes. * 7 * Extra information * 8 * Administrative tag * 9 * Administrative tag Description of the tags in the shell table. The first row shows the lower limit of the shells requested and The last row shows the total number of restraints over the shells. * 1 * Description of the content of the row: edges, shell, or sums. The value determines the meaning of the values to the nine 'Matched_shell_x' tags among others. * 2 * Lower limit of shell of expected restraints. * 3 * Upper limit of shell of expected restraints. * 4 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 5 * Observed restraints matched to the expected. Set M = A n B * 6 * Matched restraints with experimental distance in shell 1 * 7 * Matched restraints with experimental distance in shell 2 * 8 * Matched restraints with experimental distance in shell 3 * 9 * Matched restraints with experimental distance in shell 4 * 10 * Matched restraints with experimental distance in shell 5 * 11 * Matched restraints with experimental distance in shell 6 * 12 * Matched restraints with experimental distance in shell 7 * 13 * Matched restraints with experimental distance in shell 8 * 14 * Matched restraints with experimental distance in shell 9 * 15 * Matched restraints overflowing the last shell * 16 * Completeness percentage for this shell * 17 * Completeness percentage up to upper limit of this shell * 18 * Administrative tag * 19 * Administrative tag Description of the tags in the residue table: * 1 * Chain identifier * 2 * Residue number * 3 * Residue name * 4 * Observable atom(group)s for this residue. * 5 * Observed restraints. Set A = U - (E u O u I u S) * 6 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 7 * Observed restraints matched to the expected. Set M = A n B * 8 * Completeness percentage * 9 * Standard deviation from the average over the residues. * 10 * Extra information * 11 * Administrative tag * 12 * Administrative tag ; loop_ _NOE_completeness_class.Type _NOE_completeness_class.Constraint_observed_count _NOE_completeness_class.Constraint_expected_count _NOE_completeness_class.Constraint_matched_count _NOE_completeness_class.Completeness_cumulative_pct _NOE_completeness_class.Std_dev _NOE_completeness_class.Details intraresidue 0 0 0 . . "no intras" sequential 0 546 0 0.0 -0.9 . medium-range 7 95 4 4.2 -0.0 . long-range 139 526 45 8.6 0.9 . intermolecular 0 0 0 . . "no multimer" stop_ loop_ _NOE_completeness_shell.Type _NOE_completeness_shell.Shell_start _NOE_completeness_shell.Shell_end _NOE_completeness_shell.Constraint_expected_count _NOE_completeness_shell.Constraint_matched_count _NOE_completeness_shell.Matched_shell_1 _NOE_completeness_shell.Matched_shell_2 _NOE_completeness_shell.Matched_shell_3 _NOE_completeness_shell.Matched_shell_4 _NOE_completeness_shell.Matched_shell_5 _NOE_completeness_shell.Matched_shell_6 _NOE_completeness_shell.Matched_shell_7 _NOE_completeness_shell.Matched_shell_8 _NOE_completeness_shell.Matched_shell_9 _NOE_completeness_shell.Matched_shell_overflow _NOE_completeness_shell.Completeness_shell_pct _NOE_completeness_shell.Completeness_cumulative_pct edges . . . . 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 . . . . shell 0.00 2.00 1 0 0 0 0 0 0 0 0 0 . 0 0.0 0.0 shell 2.00 2.50 145 0 0 0 0 0 0 0 0 0 . 0 0.0 0.0 shell 2.50 3.00 153 6 0 0 0 5 0 0 0 1 . 0 3.9 2.0 shell 3.00 3.50 314 21 0 0 0 19 0 0 0 2 . 0 6.7 4.4 shell 3.50 4.00 554 22 0 0 0 18 0 0 0 4 . 0 4.0 4.2 shell 4.00 4.50 1040 6 0 0 0 0 0 0 0 6 . 0 0.6 2.5 shell 4.50 5.00 1453 19 0 0 0 0 0 0 0 19 . 0 1.3 2.0 shell 5.00 5.50 1952 55 0 0 0 0 0 0 0 55 . 0 2.8 2.3 shell 5.50 6.00 2387 16 0 0 0 0 0 0 0 16 . 0 0.7 1.8 shell 6.00 6.50 2683 1 0 0 0 0 0 0 0 1 . 0 0.0 1.4 shell 6.50 7.00 3075 0 0 0 0 0 0 0 0 0 . 0 0.0 1.1 shell 7.00 7.50 3253 0 0 0 0 0 0 0 0 0 . 0 0.0 0.9 shell 7.50 8.00 3365 0 0 0 0 0 0 0 0 0 . 0 0.0 0.7 shell 8.00 8.50 3643 0 0 0 0 0 0 0 0 0 . 0 0.0 0.6 shell 8.50 9.00 4000 0 0 0 0 0 0 0 0 0 . 0 0.0 0.5 sums . . 28018 146 0 0 0 42 0 0 0 104 . 0 . . stop_ loop_ _NOE_completeness_comp.Entity_assembly_ID _NOE_completeness_comp.Comp_index_ID _NOE_completeness_comp.Comp_ID _NOE_completeness_comp.Obs_atom_count _NOE_completeness_comp.Constraint_observed_count _NOE_completeness_comp.Constraint_expected_count _NOE_completeness_comp.Constraint_matched_count _NOE_completeness_comp.Completeness_cumulative_pct _NOE_completeness_comp.Std_dev _NOE_completeness_comp.Details 1 1 GLU 5 0 4 0 0.0 -1.0 >sigma 1 2 GLY 3 0 6 0 0.0 -1.0 >sigma 1 3 GLU 5 0 6 0 0.0 -1.0 >sigma 1 4 SER 4 0 12 0 0.0 -1.0 >sigma 1 5 SER 4 3 17 1 5.9 0.5 . 1 6 ILE 6 2 17 1 5.9 0.5 . 1 7 SER 4 2 16 1 6.3 0.6 . 1 8 ILE 6 0 17 0 0.0 -1.0 >sigma 1 9 GLY 3 4 18 1 5.6 0.5 . 1 10 TYR 6 4 12 1 8.3 1.2 >sigma 1 11 ALA 3 3 28 2 7.1 0.9 . 1 12 GLN 7 2 12 1 8.3 1.2 >sigma 1 13 SER 4 3 19 0 0.0 -1.0 >sigma 1 14 ARG 7 2 13 1 7.7 1.0 >sigma 1 15 VAL 5 1 21 0 0.0 -1.0 >sigma 1 16 LYS 7 1 15 1 6.7 0.8 . 1 17 GLU 5 0 8 0 0.0 -1.0 >sigma 1 18 ASP 4 0 8 0 0.0 -1.0 >sigma 1 19 GLY 3 0 8 0 0.0 -1.0 >sigma 1 20 TYR 6 0 7 0 0.0 -1.0 >sigma 1 21 LYS 7 0 16 0 0.0 -1.0 >sigma 1 22 LEU 7 0 9 0 0.0 -1.0 >sigma 1 23 ASP 4 0 14 0 0.0 -1.0 >sigma 1 24 LYS 7 1 17 0 0.0 -1.0 >sigma 1 25 ASN 6 0 13 0 0.0 -1.0 >sigma 1 26 PRO 5 0 23 0 0.0 -1.0 >sigma 1 27 ARG 7 2 8 1 12.5 2.3 >sigma 1 28 GLY 3 3 14 1 7.1 0.9 . 1 29 PHE 7 3 13 1 7.7 1.0 >sigma 1 30 ASN 6 4 30 2 6.7 0.8 . 1 31 LEU 7 5 17 1 5.9 0.5 . 1 32 LYS 7 3 31 1 3.2 -0.2 . 1 33 TYR 6 5 21 1 4.8 0.2 . 1 34 ARG 7 2 23 1 4.3 0.1 . 1 35 TYR 6 5 13 1 7.7 1.0 >sigma 1 36 GLU 5 0 7 0 0.0 -1.0 >sigma 1 37 PHE 7 0 9 0 0.0 -1.0 >sigma 1 38 ASN 6 0 9 0 0.0 -1.0 >sigma 1 39 ASN 6 0 8 0 0.0 -1.0 >sigma 1 40 ASP 4 0 8 0 0.0 -1.0 >sigma 1 41 TRP 10 1 9 0 0.0 -1.0 >sigma 1 42 GLY 3 1 13 1 7.7 1.0 >sigma 1 43 VAL 5 3 15 1 6.7 0.8 . 1 44 ILE 6 3 39 1 2.6 -0.3 . 1 45 GLY 3 5 14 1 7.1 0.9 . 1 46 SER 4 3 18 1 5.6 0.5 . 1 47 PHE 7 4 25 1 4.0 0.0 . 1 48 ALA 3 4 21 1 4.8 0.2 . 1 49 GLN 7 4 15 1 6.7 0.8 . 1 50 THR 4 2 26 2 7.7 1.0 >sigma 1 51 ARG 7 3 15 1 6.7 0.8 . 1 52 ARG 7 1 15 1 6.7 0.8 . 1 53 GLY 3 0 6 0 0.0 -1.0 >sigma 1 54 PHE 7 0 6 0 0.0 -1.0 >sigma 1 55 GLU 5 0 7 0 0.0 -1.0 >sigma 1 56 GLU 5 0 7 0 0.0 -1.0 >sigma 1 57 SER 4 0 6 0 0.0 -1.0 >sigma 1 58 VAL 5 0 7 0 0.0 -1.0 >sigma 1 59 ASP 4 0 10 0 0.0 -1.0 >sigma 1 60 GLY 3 0 7 0 0.0 -1.0 >sigma 1 61 PHE 7 0 9 0 0.0 -1.0 >sigma 1 62 LYS 7 0 8 0 0.0 -1.0 >sigma 1 63 LEU 7 0 10 0 0.0 -1.0 >sigma 1 64 ILE 6 0 9 0 0.0 -1.0 >sigma 1 65 ASP 4 0 14 0 0.0 -1.0 >sigma 1 66 GLY 3 0 10 0 0.0 -1.0 >sigma 1 67 ASP 4 0 9 0 0.0 -1.0 >sigma 1 68 PHE 7 1 20 1 5.0 0.3 . 1 69 LYS 7 1 17 1 5.9 0.5 . 1 70 TYR 6 4 17 2 11.8 2.1 >sigma 1 71 TYR 6 3 14 1 7.1 0.9 . 1 72 SER 4 2 18 1 5.6 0.5 . 1 73 VAL 5 3 20 1 5.0 0.3 . 1 74 THR 4 3 25 1 4.0 0.0 . 1 75 ALA 3 3 15 1 6.7 0.8 . 1 76 GLY 3 4 10 1 10.0 1.7 >sigma 1 77 PRO 5 0 9 0 0.0 -1.0 >sigma 1 78 VAL 5 4 31 1 3.2 -0.2 . 1 79 PHE 7 4 11 1 9.1 1.4 >sigma 1 80 ARG 7 2 11 0 0.0 -1.0 >sigma 1 81 ILE 6 2 32 1 3.1 -0.2 . 1 82 ASN 6 1 15 1 6.7 0.8 . 1 83 GLU 5 0 10 0 0.0 -1.0 >sigma 1 84 TYR 6 0 10 0 0.0 -1.0 >sigma 1 85 VAL 5 3 26 2 7.7 1.0 >sigma 1 86 SER 4 1 21 1 4.8 0.2 . 1 87 LEU 7 5 21 1 4.8 0.2 . 1 88 TYR 6 5 42 1 2.4 -0.4 . 1 89 GLY 3 3 11 0 0.0 -1.0 >sigma 1 90 LEU 7 3 31 1 3.2 -0.2 . 1 91 LEU 7 3 12 1 8.3 1.2 >sigma 1 92 GLY 3 4 17 1 5.9 0.5 . 1 93 ALA 3 4 15 1 6.7 0.8 . 1 94 GLY 3 4 15 2 13.3 2.6 >sigma 1 95 HIS 6 4 10 1 10.0 1.7 >sigma 1 96 GLY 3 2 14 1 7.1 0.9 . 1 97 LYS 7 4 11 1 9.1 1.4 >sigma 1 98 ALA 3 1 19 1 5.3 0.4 . 1 99 LYS 7 1 13 0 0.0 -1.0 >sigma 1 100 PHE 7 4 8 0 0.0 -1.0 >sigma 1 101 SER 4 0 4 0 0.0 -1.0 >sigma 1 102 SER 4 0 5 0 0.0 -1.0 >sigma 1 103 ILE 6 0 7 0 0.0 -1.0 >sigma 1 104 PHE 7 1 10 1 10.0 1.7 >sigma 1 105 GLY 3 0 8 0 0.0 -1.0 >sigma 1 106 GLN 7 1 11 1 9.1 1.4 >sigma 1 107 SER 4 0 7 0 0.0 -1.0 >sigma 1 108 GLU 5 2 7 0 0.0 -1.0 >sigma 1 109 SER 4 1 13 0 0.0 -1.0 >sigma 1 110 ARG 7 3 13 1 7.7 1.0 >sigma 1 111 SER 4 0 10 0 0.0 -1.0 >sigma 1 112 LYS 7 2 14 1 7.1 0.9 . 1 113 THR 4 1 8 0 0.0 -1.0 >sigma 1 114 SER 4 2 10 1 10.0 1.7 >sigma 1 115 LEU 7 2 10 1 10.0 1.7 >sigma 1 116 ALA 3 3 22 2 9.1 1.4 >sigma 1 117 TYR 6 4 10 1 10.0 1.7 >sigma 1 118 GLY 3 3 15 1 6.7 0.8 . 1 119 ALA 3 2 14 1 7.1 0.9 . 1 120 GLY 3 5 16 1 6.3 0.6 . 1 121 LEU 7 4 17 1 5.9 0.5 . 1 122 GLN 7 4 27 1 3.7 -0.0 . 1 123 PHE 7 4 16 1 6.3 0.6 . 1 124 ASN 6 2 13 0 0.0 -1.0 >sigma 1 125 PRO 5 0 18 0 0.0 -1.0 >sigma 1 126 HIS 6 3 20 1 5.0 0.3 . 1 127 PRO 5 0 8 0 0.0 -1.0 >sigma 1 128 ASN 6 0 9 0 0.0 -1.0 >sigma 1 129 PHE 7 4 22 1 4.5 0.2 . 1 130 VAL 5 3 24 1 4.2 0.1 . 1 131 ILE 6 4 21 1 4.8 0.2 . 1 132 ASP 4 4 16 1 6.3 0.6 . 1 133 ALA 3 3 16 1 6.3 0.6 . 1 134 SER 4 3 22 1 4.5 0.2 . 1 135 TYR 6 4 16 1 6.3 0.6 . 1 136 GLU 5 1 29 1 3.4 -0.1 . 1 137 TYR 6 3 16 1 6.3 0.6 . 1 138 SER 4 2 16 1 6.3 0.6 . 1 139 LYS 7 1 8 1 12.5 2.3 >sigma 1 140 LEU 7 1 31 0 0.0 -1.0 >sigma 1 141 ASP 4 0 9 0 0.0 -1.0 >sigma 1 142 ASP 4 0 14 0 0.0 -1.0 >sigma 1 143 VAL 5 1 31 0 0.0 -1.0 >sigma 1 144 LYS 7 1 16 1 6.3 0.6 . 1 145 VAL 5 1 29 1 3.4 -0.1 . 1 146 GLY 3 1 14 1 7.1 0.9 . 1 147 THR 4 3 23 1 4.3 0.1 . 1 148 TRP 10 3 10 1 10.0 1.7 >sigma 1 149 MET 6 2 29 1 3.4 -0.1 . 1 150 LEU 7 3 15 1 6.7 0.8 . 1 151 GLY 3 2 13 1 7.7 1.0 >sigma 1 152 ALA 3 2 17 0 0.0 -1.0 >sigma 1 153 GLY 3 3 15 1 6.7 0.8 . 1 154 TYR 6 3 13 1 7.7 1.0 >sigma 1 155 ARG 7 2 12 0 0.0 -1.0 >sigma 1 156 PHE 7 1 7 0 0.0 -1.0 >sigma stop_ save_
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