NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
530311 4a53 18041 cing 4-filtered-FRED Wattos check stereo assignment distance


data_4a53


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        36
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       2
    _Stereo_assign_list.Deassign_percentage  5.6
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.980
    _Stereo_assign_list.Total_e_high_states  58.361
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  7 VAL QG 35 no 100.0 100.0  1.302  1.302 0.000 1 0 no  0.000 0  0 
       1 10 PHE QD 23 no 100.0 100.0 17.343 17.343 0.000 2 0 no  0.001 0  0 
       1 11 TYR QD 10 no 100.0  96.4  3.599  3.735 0.136 3 0 no  0.619 0  3 
       1 11 TYR QE  9 no 100.0  99.9  1.971  1.973 0.002 3 0 no  0.082 0  0 
       1 12 GLY QA 25 no 100.0   0.0  0.000  0.000 0.000 2 2 no  0.000 0  0 
       1 14 ASN QD 24 no 100.0   0.0  0.000  0.000 0.000 2 2 no  0.000 0  0 
       1 15 VAL QG 34 no 100.0   0.0  0.000  0.000 0.000 1 0 no  0.000 0  0 
       1 16 GLU QG 33 no 100.0   0.0  0.000  0.000 0.000 1 0 no  0.000 0  0 
       1 17 VAL QG  8 no 100.0   0.0  0.000  0.433 0.433 3 0 yes 0.841 0 17 
       1 18 LEU QB 36 no 100.0 100.0  0.876  0.876 0.000 1 1 no  0.000 0  0 
       1 18 LEU QD  3 no 100.0 100.0  2.572  2.572 0.000 7 2 no  0.000 0  0 
       1 20 ASN QB 32 no 100.0 100.0  0.860  0.860 0.000 1 0 no  0.007 0  0 
       1 20 ASN QD 31 no 100.0 100.0  0.416  0.416 0.000 1 0 no  0.053 0  0 
       1 21 ASN QD 30 no 100.0 100.0  0.000  0.000 0.000 1 0 no  0.012 0  0 
       1 23 SER QB 22 no 100.0   0.0  0.000  0.000 0.000 2 0 no  0.000 0  0 
       1 26 ARG QD 29 no 100.0 100.0  0.001  0.001 0.000 1 0 no  0.126 0  0 
       1 27 GLY QA  4 no 100.0 100.0  0.002  0.002 0.000 6 2 no  0.224 0  0 
       1 28 VAL QG  1 no 100.0 100.0  8.224  8.224 0.000 9 4 no  0.000 0  0 
       1 31 ASN QB 28 no 100.0 100.0  0.000  0.000 0.000 1 0 no  0.009 0  0 
       1 32 PHE QD 21 no 100.0 100.0 14.806 14.806 0.000 2 0 no  0.027 0  0 
       1 33 ASP QB 20 no 100.0 100.0  1.446  1.446 0.000 2 0 no  0.000 0  0 
       1 39 LEU QD 19 no 100.0 100.0  0.008  0.008 0.000 2 0 no  0.000 0  0 
       1 40 GLN QB  7 no 100.0 100.0  2.267  2.267 0.000 3 0 no  0.024 0  0 
       1 40 GLN QG 27 no 100.0 100.0  0.276  0.276 0.000 1 0 no  0.000 0  0 
       1 41 LEU QD  2 no  70.0 100.0  0.010  0.010 0.000 7 0 no  0.000 0  0 
       1 43 LEU QD  5 no 100.0   0.0  0.000  0.395 0.395 5 2 yes 0.695 0 17 
       1 47 SER QB 18 no 100.0   0.0  0.000  0.000 0.000 2 0 no  0.025 0  0 
       1 49 LYS QG 17 no  50.0  99.9  0.466  0.466 0.000 2 0 no  0.031 0  0 
       1 52 VAL QG 26 no 100.0   0.0  0.000  0.000 0.000 1 0 no  0.000 0  0 
       1 54 LYS QG 16 no   0.0   0.0  0.000  0.007 0.007 2 0 no  0.118 0  0 
       1 57 LYS QB 15 no 100.0   0.0  0.000  0.001 0.001 2 0 no  0.062 0  0 
       1 58 ASP QB 11 no 100.0 100.0  0.934  0.934 0.000 3 3 no  0.000 0  0 
       1 60 ARG QD 14 no 100.0   0.0  0.000  0.003 0.003 2 0 no  0.101 0  0 
       1 60 ARG QG 13 no 100.0   0.0  0.000  0.002 0.002 2 0 no  0.082 0  0 
       1 62 LEU QB  6 no 100.0   0.0  0.000  0.000 0.000 4 0 no  0.000 0  0 
       1 62 LEU QD 12 no 100.0   0.0  0.000  0.000 0.000 2 0 no  0.000 0  0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Thursday, May 9, 2024 9:16:59 AM GMT (wattos1)