NMR Restraints Grid |
Result table
image | mrblock_id | pdb_id | bmrb_id | cing | stage | program | type | subtype | subsubtype |
494926 | 2l69 | 17304 | cing | 4-filtered-FRED | Wattos | check | completeness | distance |
data_2l69 save_NOE_Completeness _NOE_completeness_stats.Sf_category NOE_completeness_statistics _NOE_completeness_stats.Model_count 20 _NOE_completeness_stats.Residue_count 134 _NOE_completeness_stats.Total_atom_count 2270 _NOE_completeness_stats.Observable_atom_definition ob_standard _NOE_completeness_stats.Observable_atom_count 786 _NOE_completeness_stats.Use_intra_residue_restraints no _NOE_completeness_stats.Redundancy_threshold_pct 5.0 _NOE_completeness_stats.Distance_averaging_power 1.00 _NOE_completeness_stats.Completeness_cutoff 4.00 _NOE_completeness_stats.Completeness_cumulative_pct 61.0 _NOE_completeness_stats.Constraint_unexpanded_count 2699 _NOE_completeness_stats.Constraint_count 2699 _NOE_completeness_stats.Constraint_exp_unfiltered_count 2119 _NOE_completeness_stats.Constraint_exceptional_count 0 _NOE_completeness_stats.Constraint_nonobservable_count 0 _NOE_completeness_stats.Constraint_intraresidue_count 679 _NOE_completeness_stats.Constraint_surplus_count 202 _NOE_completeness_stats.Constraint_observed_count 1818 _NOE_completeness_stats.Constraint_expected_count 1950 _NOE_completeness_stats.Constraint_matched_count 1189 _NOE_completeness_stats.Constraint_unmatched_count 629 _NOE_completeness_stats.Constraint_exp_nonobs_count 761 _NOE_completeness_stats.Details ; A detailed methodology description is available at: http://nmr.cmbi.ru.nl/~jd/wattos/doc/Wattos/Soup/Constraint/dc_completeness.html Please note that the contributions in ambiguous restraints are considered separate 'restraints' for the sets defined below. The cut off for all statistics except those in the by-shell table is given below by the above tag: _NOE_completeness_stats.Completeness_cutoff Description of the tags in this list: * 1 * Administrative tag * 2 * Administrative tag * 3 * Administrative tag * 4 * Number of models * 5 * Number of residues * 6 * Number of atoms * 7 * Standard set name of observable atom definitions see: Doreleijers et al., J.Biomol.NMR 14, 123-132 (1999). * 8 * Observable atom(group)s * 9 * Include intra residue restraints * 10 * Surplus threshold for determining redundant restraints * 11 * Power for averaging the distance over models * 12 * Up to what distance are NOEs expected * 13 * Cumulative completeness percentage * 14 * Number of unexpanded restraints in restraint list. * 15 * Number of restraints in restraint list. Set U * 16 * Expected restraints based on criteria in list. Set V Set V differs from set B only if intra residue restraints are analyzed. * 17 * Exceptional restraints, i.e. with an unknown atom.Set E * 18 * Not observable NOEs with e.g. hydroxyl Ser HG. Set O Even though restraints with these atom types might have been observed they are excluded from the analysis. * 19 * Intra-residue restraints if not to be analyzed. Set I * 20 * Surplus like double restraints. Set S * 21 * Observed restraints. Set A = U - (E u O u I u S) * 22 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 23 * Observed restraints matched to the expected. Set M = A n B * 24 * Observed restraints that were not expected. Set C = A - M * 25 * Expected restraints that were not observed. Set D = B - M * 26 * This tag Description of the tags in the class table: * 1 * Class of restraint. Note that 'medium-range' involves (2<=i<=4) contacts. Possible values are: intraresidue,sequential,medium-range,long-range, and intermolecular. * 2 * Observed restraints. Set A = U - (E u O u I u S) * 3 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 4 * Observed restraints matched to the expected. Set M = A n B * 5 * Completeness percentage * 6 * Standard deviation from the average over the classes. * 7 * Extra information * 8 * Administrative tag * 9 * Administrative tag Description of the tags in the shell table. The first row shows the lower limit of the shells requested and The last row shows the total number of restraints over the shells. * 1 * Description of the content of the row: edges, shell, or sums. The value determines the meaning of the values to the nine 'Matched_shell_x' tags among others. * 2 * Lower limit of shell of expected restraints. * 3 * Upper limit of shell of expected restraints. * 4 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 5 * Observed restraints matched to the expected. Set M = A n B * 6 * Matched restraints with experimental distance in shell 1 * 7 * Matched restraints with experimental distance in shell 2 * 8 * Matched restraints with experimental distance in shell 3 * 9 * Matched restraints with experimental distance in shell 4 * 10 * Matched restraints with experimental distance in shell 5 * 11 * Matched restraints with experimental distance in shell 6 * 12 * Matched restraints with experimental distance in shell 7 * 13 * Matched restraints with experimental distance in shell 8 * 14 * Matched restraints with experimental distance in shell 9 * 15 * Matched restraints overflowing the last shell * 16 * Completeness percentage for this shell * 17 * Completeness percentage up to upper limit of this shell * 18 * Administrative tag * 19 * Administrative tag Description of the tags in the residue table: * 1 * Chain identifier * 2 * Residue number * 3 * Residue name * 4 * Observable atom(group)s for this residue. * 5 * Observed restraints. Set A = U - (E u O u I u S) * 6 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 7 * Observed restraints matched to the expected. Set M = A n B * 8 * Completeness percentage * 9 * Standard deviation from the average over the residues. * 10 * Extra information * 11 * Administrative tag * 12 * Administrative tag ; loop_ _NOE_completeness_class.Type _NOE_completeness_class.Constraint_observed_count _NOE_completeness_class.Constraint_expected_count _NOE_completeness_class.Constraint_matched_count _NOE_completeness_class.Completeness_cumulative_pct _NOE_completeness_class.Std_dev _NOE_completeness_class.Details intraresidue 0 0 0 . . "no intras" sequential 547 608 361 59.4 -1.0 . medium-range 493 450 280 62.2 0.7 . long-range 778 892 548 61.4 0.3 . intermolecular 0 0 0 . . "no multimer" stop_ loop_ _NOE_completeness_shell.Type _NOE_completeness_shell.Shell_start _NOE_completeness_shell.Shell_end _NOE_completeness_shell.Constraint_expected_count _NOE_completeness_shell.Constraint_matched_count _NOE_completeness_shell.Matched_shell_1 _NOE_completeness_shell.Matched_shell_2 _NOE_completeness_shell.Matched_shell_3 _NOE_completeness_shell.Matched_shell_4 _NOE_completeness_shell.Matched_shell_5 _NOE_completeness_shell.Matched_shell_6 _NOE_completeness_shell.Matched_shell_7 _NOE_completeness_shell.Matched_shell_8 _NOE_completeness_shell.Matched_shell_9 _NOE_completeness_shell.Matched_shell_overflow _NOE_completeness_shell.Completeness_shell_pct _NOE_completeness_shell.Completeness_cumulative_pct edges . . . . 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 . . . . shell 0.00 2.00 19 15 0 0 0 6 8 0 1 0 . 0 78.9 78.9 shell 2.00 2.50 181 144 0 1 22 50 39 26 3 2 . 1 79.6 79.5 shell 2.50 3.00 385 325 0 0 12 103 108 68 22 9 . 3 84.4 82.7 shell 3.00 3.50 500 331 0 0 4 27 85 99 77 28 . 11 66.2 75.1 shell 3.50 4.00 865 374 0 0 0 6 42 129 117 56 . 24 43.2 61.0 shell 4.00 4.50 1243 329 0 0 0 0 12 79 117 74 . 47 26.5 47.5 shell 4.50 5.00 1802 197 0 0 0 0 0 8 69 51 . 69 10.9 34.3 shell 5.00 5.50 2356 76 0 0 0 0 0 0 11 28 . 37 3.2 24.4 shell 5.50 6.00 2797 23 0 0 0 0 0 0 0 5 . 18 0.8 17.9 shell 6.00 6.50 2978 4 0 0 0 0 0 0 0 0 . 4 0.1 13.9 shell 6.50 7.00 3439 0 0 0 0 0 0 0 0 0 . 0 0.0 11.0 shell 7.00 7.50 3572 0 0 0 0 0 0 0 0 0 . 0 0.0 9.0 shell 7.50 8.00 4001 0 0 0 0 0 0 0 0 0 . 0 0.0 7.5 shell 8.00 8.50 4314 0 0 0 0 0 0 0 0 0 . 0 0.0 6.4 shell 8.50 9.00 4543 0 0 0 0 0 0 0 0 0 . 0 0.0 5.5 sums . . 32995 1818 0 1 38 192 294 409 417 253 . 214 . . stop_ loop_ _NOE_completeness_comp.Entity_assembly_ID _NOE_completeness_comp.Comp_index_ID _NOE_completeness_comp.Comp_ID _NOE_completeness_comp.Obs_atom_count _NOE_completeness_comp.Constraint_observed_count _NOE_completeness_comp.Constraint_expected_count _NOE_completeness_comp.Constraint_matched_count _NOE_completeness_comp.Completeness_cumulative_pct _NOE_completeness_comp.Std_dev _NOE_completeness_comp.Details 1 1 MET 6 0 4 0 0.0 -2.9 >sigma 1 2 ASN 6 15 14 7 50.0 -0.3 . 1 3 ILE 6 37 55 21 38.2 -0.9 . 1 4 VAL 5 38 46 20 43.5 -0.7 . 1 5 ILE 6 65 70 43 61.4 0.3 . 1 6 VAL 5 60 59 38 64.4 0.4 . 1 7 VAL 5 51 54 32 59.3 0.1 . 1 8 PHE 7 43 40 28 70.0 0.7 . 1 9 SER 4 15 22 10 45.5 -0.6 . 1 10 THR 4 9 9 5 55.6 -0.0 . 1 11 ASP 4 13 10 8 80.0 1.2 >sigma 1 12 GLU 5 14 12 9 75.0 0.9 . 1 13 GLU 5 14 16 11 68.8 0.6 . 1 14 THR 4 27 30 21 70.0 0.7 . 1 15 LEU 7 44 55 24 43.6 -0.7 . 1 16 ARG 7 25 26 16 61.5 0.3 . 1 17 LYS 7 25 28 14 50.0 -0.3 . 1 18 PHE 7 42 58 28 48.3 -0.4 . 1 19 LYS 7 32 48 24 50.0 -0.3 . 1 20 ASP 4 21 20 11 55.0 -0.1 . 1 21 ILE 6 61 54 42 77.8 1.1 >sigma 1 22 ILE 6 57 68 45 66.2 0.5 . 1 23 LYS 7 19 23 13 56.5 0.0 . 1 24 LYS 7 15 17 12 70.6 0.7 . 1 25 ASN 6 24 29 16 55.2 -0.1 . 1 26 GLY 3 8 9 4 44.4 -0.6 . 1 27 PHE 7 37 44 31 70.5 0.7 . 1 28 LYS 7 19 21 15 71.4 0.8 . 1 29 VAL 5 36 45 26 57.8 0.1 . 1 30 ARG 7 31 28 19 67.9 0.6 . 1 31 THR 4 24 28 16 57.1 0.0 . 1 32 VAL 5 48 57 37 64.9 0.4 . 1 33 ARG 7 16 15 10 66.7 0.5 . 1 34 SER 4 16 21 11 52.4 -0.2 . 1 35 PRO 5 12 20 11 55.0 -0.1 . 1 36 GLN 7 11 19 9 47.4 -0.5 . 1 37 GLU 5 26 31 20 64.5 0.4 . 1 38 LEU 7 45 58 30 51.7 -0.2 . 1 39 LYS 7 26 27 16 59.3 0.1 . 1 40 ASP 4 14 17 12 70.6 0.7 . 1 41 SER 4 23 22 15 68.2 0.6 . 1 42 ILE 6 44 42 27 64.3 0.4 . 1 43 GLU 5 17 17 10 58.8 0.1 . 1 44 GLU 5 15 18 10 55.6 -0.0 . 1 45 LEU 7 21 23 12 52.2 -0.2 . 1 46 VAL 5 17 22 14 63.6 0.4 . 1 47 LYS 7 17 24 12 50.0 -0.3 . 1 48 LYS 7 6 13 2 15.4 -2.1 >sigma 1 49 TYR 6 7 8 2 25.0 -1.6 >sigma 1 50 ASN 6 0 7 0 0.0 -2.9 >sigma 1 51 ALA 3 7 15 6 40.0 -0.8 . 1 52 THR 4 18 24 13 54.2 -0.1 . 1 53 ILE 6 59 56 37 66.1 0.5 . 1 54 VAL 5 50 43 21 48.8 -0.4 . 1 55 VAL 5 43 56 28 50.0 -0.3 . 1 56 VAL 5 53 49 35 71.4 0.8 . 1 57 VAL 5 37 37 20 54.1 -0.1 . 1 58 VAL 5 54 46 36 78.3 1.1 >sigma 1 59 ASP 4 9 14 9 64.3 0.4 . 1 60 ASP 4 8 13 6 46.2 -0.5 . 1 61 LYS 7 14 12 8 66.7 0.5 . 1 62 GLU 5 16 15 12 80.0 1.2 >sigma 1 63 TRP 10 43 51 32 62.7 0.3 . 1 64 ALA 3 31 29 23 79.3 1.2 >sigma 1 65 GLU 5 25 26 17 65.4 0.5 . 1 66 LYS 7 22 27 14 51.9 -0.2 . 1 67 ALA 3 28 27 16 59.3 0.1 . 1 68 ILE 6 49 58 33 56.9 0.0 . 1 69 ARG 7 16 21 14 66.7 0.5 . 1 70 PHE 7 42 40 28 70.0 0.7 . 1 71 VAL 5 50 50 34 68.0 0.6 . 1 72 LYS 7 26 28 18 64.3 0.4 . 1 73 SER 4 19 12 8 66.7 0.5 . 1 74 LEU 7 44 34 26 76.5 1.0 >sigma 1 75 GLY 3 8 8 4 50.0 -0.3 . 1 76 ALA 3 15 12 8 66.7 0.5 . 1 77 GLN 7 6 9 3 33.3 -1.2 >sigma 1 78 VAL 5 36 34 20 58.8 0.1 . 1 79 LEU 7 31 43 17 39.5 -0.9 . 1 80 ILE 6 57 63 38 60.3 0.2 . 1 81 ILE 6 70 60 38 63.3 0.3 . 1 82 ILE 6 69 68 53 77.9 1.1 >sigma 1 83 TYR 6 51 54 37 68.5 0.6 . 1 84 ASP 4 34 27 22 81.5 1.3 >sigma 1 85 GLN 7 9 9 6 66.7 0.5 . 1 86 ASP 4 11 15 8 53.3 -0.2 . 1 87 GLN 7 18 18 11 61.1 0.2 . 1 88 ASN 6 15 10 7 70.0 0.7 . 1 89 ARG 7 15 18 11 61.1 0.2 . 1 90 LEU 7 60 51 40 78.4 1.1 >sigma 1 91 GLU 5 23 24 18 75.0 0.9 . 1 92 GLU 5 17 16 10 62.5 0.3 . 1 93 PHE 7 50 53 34 64.2 0.4 . 1 94 SER 4 38 26 24 92.3 1.8 >sigma 1 95 ARG 7 14 16 10 62.5 0.3 . 1 96 GLU 5 17 21 9 42.9 -0.7 . 1 97 VAL 5 63 57 43 75.4 1.0 . 1 98 ARG 7 24 25 17 68.0 0.6 . 1 99 ARG 7 9 14 4 28.6 -1.4 >sigma 1 100 ARG 7 32 37 18 48.6 -0.4 . 1 101 GLY 3 9 8 4 50.0 -0.3 . 1 102 PHE 7 60 51 37 72.5 0.8 . 1 103 GLU 5 19 11 8 72.7 0.8 . 1 104 VAL 5 47 51 30 58.8 0.1 . 1 105 ARG 7 30 28 14 50.0 -0.3 . 1 106 THR 4 37 33 27 81.8 1.3 >sigma 1 107 VAL 5 60 49 42 85.7 1.5 >sigma 1 108 THR 4 18 17 12 70.6 0.7 . 1 109 SER 4 20 21 14 66.7 0.5 . 1 110 PRO 5 14 24 11 45.8 -0.5 . 1 111 ASP 4 13 15 9 60.0 0.2 . 1 112 ASP 4 21 23 14 60.9 0.2 . 1 113 PHE 7 70 75 57 76.0 1.0 . 1 114 LYS 7 43 40 30 75.0 0.9 . 1 115 LYS 7 17 19 11 57.9 0.1 . 1 116 SER 4 20 21 13 61.9 0.3 . 1 117 LEU 7 63 61 45 73.8 0.9 . 1 118 GLU 5 26 22 16 72.7 0.8 . 1 119 ARG 7 18 19 10 52.6 -0.2 . 1 120 LEU 7 32 51 18 35.3 -1.1 >sigma 1 121 ILE 6 45 46 31 67.4 0.6 . 1 122 ARG 7 17 16 9 56.3 -0.0 . 1 123 GLU 5 16 18 11 61.1 0.2 . 1 124 VAL 5 26 28 15 53.6 -0.1 . 1 125 GLY 3 10 14 7 50.0 -0.3 . 1 126 SER 4 2 8 0 0.0 -2.9 >sigma 1 127 LEU 7 14 9 5 55.6 -0.0 . 1 128 GLU 5 12 9 5 55.6 -0.0 . 1 129 HIS 6 0 7 0 0.0 -2.9 >sigma 1 130 HIS 6 0 8 0 0.0 -2.9 >sigma 1 131 HIS 6 0 8 0 0.0 -2.9 >sigma 1 132 HIS 6 0 7 0 0.0 -2.9 >sigma 1 133 HIS 6 0 6 0 0.0 -2.9 >sigma 1 134 HIS 6 0 3 0 0.0 -2.9 >sigma stop_ save_
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