NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
461236 2dl8 11225 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2dl8


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        76
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.010
    _Stereo_assign_list.Total_e_high_states  266.545
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  8 GLU QB 65 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.015 0 0 
       1  8 GLU QG 54 no 100.0   0.0  0.000  0.000 0.000  8  2 no 0.000 0 0 
       1  9 PRO QB 28 no 100.0 100.0  0.739  0.739 0.000 17  6 no 0.027 0 0 
       1  9 PRO QD 42 no 100.0 100.0  1.107  1.107 0.000 13  6 no 0.003 0 0 
       1 10 ILE QG 61 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.015 0 0 
       1 11 GLU QB 52 no 100.0 100.0  1.190  1.190 0.000  8  1 no 0.001 0 0 
       1 11 GLU QG 41 no 100.0 100.0  2.515  2.515 0.000 13  4 no 0.007 0 0 
       1 13 ILE QG 27 no 100.0 100.0  3.263  3.263 0.000 17  4 no 0.005 0 0 
       1 15 LYS QB 12 no 100.0  99.8  2.899  2.905 0.006 21  1 no 0.113 0 0 
       1 15 LYS QG 37 no 100.0   0.0  0.000  0.000 0.000 14  0 no 0.007 0 0 
       1 16 PHE QB 46 no 100.0 100.0  2.968  2.968 0.000 11  0 no 0.014 0 0 
       1 17 ASP QB 51 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.008 0 0 
       1 18 TYR QB 21 no 100.0 100.0  4.393  4.393 0.000 19  3 no 0.009 0 0 
       1 19 VAL QG 62 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.010 0 0 
       1 20 GLY QA 17 no 100.0 100.0  0.472  0.472 0.000 20  6 no 0.000 0 0 
       1 21 ARG QG 72 no 100.0   0.0  0.000  0.002 0.002  4  0 no 0.083 0 0 
       1 24 ARG QB 10 no 100.0 100.0  4.854  4.854 0.000 22  9 no 0.003 0 0 
       1 24 ARG QD 64 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.000 0 0 
       1 24 ARG QG 71 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 25 GLU QB 14 no 100.0 100.0  3.478  3.478 0.000 21  6 no 0.006 0 0 
       1 25 GLU QG 31 no 100.0   0.0  0.000  0.000 0.000 16  4 no 0.024 0 0 
       1 26 LEU QB 19 no 100.0 100.0  2.096  2.096 0.000 20  9 no 0.005 0 0 
       1 26 LEU QD  3 no 100.0 100.0 23.067 23.067 0.000 41 15 no 0.004 0 0 
       1 27 SER QB 70 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 28 PHE QB 45 no 100.0 100.0  1.920  1.920 0.000 12  2 no 0.001 0 0 
       1 29 LYS QB 53 no 100.0 100.0  1.015  1.015 0.000  8  2 no 0.061 0 0 
       1 29 LYS QD 75 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.019 0 0 
       1 29 LYS QE 76 no 100.0   0.0  0.000  0.000 0.000  2  2 no 0.061 0 0 
       1 29 LYS QG 69 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.022 0 0 
       1 30 LYS QD 60 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.006 0 0 
       1 31 GLY QA 40 no 100.0 100.0  1.903  1.903 0.000 13  0 no 0.005 0 0 
       1 33 SER QB 59 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.006 0 0 
       1 34 LEU QB 26 no 100.0 100.0  3.674  3.674 0.000 17  4 no 0.001 0 0 
       1 34 LEU QD  2 no 100.0 100.0 43.485 43.485 0.000 43 11 no 0.005 0 0 
       1 35 LEU QB 32 no 100.0 100.0  2.850  2.851 0.000 16  7 no 0.027 0 0 
       1 35 LEU QD  4 no 100.0 100.0 27.002 27.002 0.000 33 15 no 0.027 0 0 
       1 36 LEU QB  8 no 100.0 100.0  4.364  4.364 0.000 26  8 no 0.012 0 0 
       1 36 LEU QD  1 no 100.0 100.0 40.083 40.083 0.000 54 13 no 0.008 0 0 
       1 37 TYR QB 36 no 100.0 100.0  4.155  4.156 0.000 15  7 no 0.060 0 0 
       1 38 GLN QB 68 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.018 0 0 
       1 38 GLN QG 74 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.036 0 0 
       1 39 ARG QB 38 no 100.0 100.0  0.845  0.845 0.000 14  2 no 0.000 0 0 
       1 39 ARG QD 24 no 100.0 100.0  1.247  1.247 0.000 17  2 no 0.000 0 0 
       1 39 ARG QG 34 no 100.0 100.0  1.391  1.391 0.000 15  0 no 0.006 0 0 
       1 41 SER QB 50 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1 44 TRP QB 13 no 100.0 100.0  2.900  2.900 0.000 21  3 no 0.000 0 0 
       1 45 TRP QB  5 no 100.0 100.0  4.781  4.781 0.000 32  8 no 0.007 0 0 
       1 46 GLU QB 18 no 100.0 100.0  1.433  1.433 0.000 20  8 no 0.009 0 0 
       1 46 GLU QG 35 no 100.0 100.0  0.833  0.833 0.000 15  3 no 0.009 0 0 
       1 47 GLY QA  6 no 100.0 100.0  6.196  6.196 0.000 30 13 no 0.012 0 0 
       1 48 ARG QB 15 no 100.0 100.0  4.236  4.236 0.000 21  9 no 0.009 0 0 
       1 48 ARG QD 63 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.000 0 0 
       1 48 ARG QG 44 no 100.0   0.0  0.000  0.000 0.000 12  2 no 0.000 0 0 
       1 49 HIS QB 55 no 100.0 100.0  0.811  0.811 0.000  8  5 no 0.005 0 0 
       1 50 ASN QB 67 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 51 GLY QA 49 no 100.0 100.0  1.947  1.947 0.000  9  4 no 0.000 0 0 
       1 52 ILE QG 58 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1 53 ASP QB 56 no 100.0 100.0  2.247  2.247 0.000  7  0 no 0.000 0 0 
       1 54 GLY QA 43 no 100.0 100.0  4.260  4.260 0.000 13  8 no 0.005 0 0 
       1 55 LEU QB  7 no 100.0 100.0  4.348  4.348 0.000 28 12 no 0.031 0 0 
       1 55 LEU QD 33 no 100.0   0.0  0.000  0.000 0.000 16  8 no 0.000 0 0 
       1 56 ILE QG 11 no 100.0 100.0  3.803  3.803 0.000 22 11 no 0.005 0 0 
       1 57 PRO QB 16 no 100.0 100.0  4.345  4.345 0.000 20  2 no 0.003 0 0 
       1 57 PRO QD 30 no 100.0 100.0  3.609  3.609 0.000 16  2 no 0.008 0 0 
       1 57 PRO QG 20 no 100.0 100.0  3.679  3.679 0.000 19  3 no 0.004 0 0 
       1 58 HIS QB 23 no 100.0 100.0  1.353  1.353 0.000 17  0 no 0.036 0 0 
       1 59 GLN QB 47 no 100.0 100.0  0.411  0.411 0.000  9  0 no 0.027 0 0 
       1 60 TYR QB  9 no 100.0 100.0  4.604  4.604 0.000 26 10 no 0.011 0 0 
       1 61 ILE QG 29 no 100.0 100.0  1.080  1.080 0.000 16  0 no 0.004 0 0 
       1 62 VAL QG 25 no 100.0 100.0 20.229 20.229 0.000 17  3 no 0.005 0 0 
       1 63 VAL QG 22 no 100.0   0.0  0.000  0.000 0.000 18  2 no 0.000 0 0 
       1 64 GLN QB 57 no 100.0 100.0  0.441  0.441 0.000  6  0 no 0.000 0 0 
       1 64 GLN QE 48 no 100.0 100.0  2.015  2.015 0.000  9  3 no 0.000 0 0 
       1 64 GLN QG 39 no 100.0   0.0  0.000  0.000 0.000 14  4 no 0.000 0 0 
       1 65 ASP QB 66 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 68 GLY QA 73 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.067 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Saturday, May 11, 2024 3:37:08 PM GMT (wattos1)