NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id cing stage program type subtype subsubtype
399948 1uhp cing 4-filtered-FRED Wattos check stereo assignment distance


data_1uhp


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        106
    _Stereo_assign_list.Swap_count           38
    _Stereo_assign_list.Swap_percentage      35.8
    _Stereo_assign_list.Deassign_count       14
    _Stereo_assign_list.Deassign_percentage  13.2
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   45.311
    _Stereo_assign_list.Total_e_high_states  321.342
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   7 GLY QA  80 no   90.0  97.7  1.803  1.845 0.042  6  0 no  0.730  0  1 
       1   8 LYS QB  67 no   45.0  99.9  0.180  0.180 0.000  7  1 no  0.036  0  0 
       1   8 LYS QG  86 yes  90.0  81.1  0.147  0.182 0.034  5  0 no  0.751  0  1 
       1  10 LEU QD  30 no   40.0  19.1  0.992  5.185 4.193 13  3 yes 2.495 32 42 
       1  12 LEU QD   6 no  100.0  99.7 23.116 23.175 0.059 26 10 no  0.213  0  0 
       1  13 VAL QG  15 no   65.0  24.5  0.899  3.668 2.769 18  6 yes 1.971 18 54 
       1  14 LEU QB  59 yes 100.0 100.0  2.485  2.485 0.000  9  3 no  0.041  0  0 
       1  14 LEU QD  14 yes 100.0  99.9  9.752  9.757 0.005 19  8 no  0.109  0  0 
       1  15 HIS QB  71 no  100.0  99.8  2.744  2.751 0.007  7  2 no  0.108  0  0 
       1  16 ARG QB  51 no   80.0  92.6  0.376  0.406 0.030 11  5 no  0.437  0  0 
       1  16 ARG QD  54 yes  75.0  14.0  0.307  2.187 1.880 10  7 no  0.356  0  0 
       1  16 ARG QG  49 yes  85.0  65.1  0.154  0.236 0.082 11  3 no  0.693  0  3 
       1  17 ASP QB  29 no  100.0  74.0  1.907  2.576 0.669 14 10 no  0.035  0  0 
       1  19 GLY QA 101 yes 100.0  99.3  1.862  1.875 0.013  2  2 no  0.356  0  0 
       1  21 LEU QB  47 no  100.0  99.8  0.115  0.115 0.000 11  2 no  0.063  0  0 
       1  21 LEU QD  13 no  100.0  99.6  7.409  7.436 0.026 19  7 no  0.322  0  0 
       1  22 GLY QA  44 yes 100.0  68.7  0.133  0.193 0.060 12  5 no  0.272  0  0 
       1  23 PHE QB  17 yes 100.0  63.5  1.483  2.334 0.851 18  8 no  0.134  0  0 
       1  24 ASN QB  43 no  100.0  99.7  1.237  1.241 0.004 12  5 no  0.205  0  0 
       1  24 ASN QD 100 no   35.0 100.0  0.280  0.280 0.000  2  0 no  0.000  0  0 
       1  25 ILE QG  37 yes 100.0 100.0  1.722  1.722 0.000 12  0 no  0.000  0  0 
       1  26 ILE QG  21 yes 100.0  43.2  1.247  2.888 1.641 15  6 no  0.064  0  0 
       1  27 GLY QA  99 yes  95.0  85.3  0.456  0.534 0.078  2  0 yes 1.252  1  1 
       1  28 GLY QA  85 no   35.0  81.8  0.018  0.022 0.004  5  0 no  0.131  0  0 
       1  29 ARG QB  73 no   95.0  80.5  0.343  0.426 0.083  7  3 no  0.553  0  1 
       1  30 PRO QD  72 no  100.0  99.9  0.086  0.086 0.000  7  3 no  0.553  0  2 
       1  30 PRO QG  98 no  100.0 100.0  0.002  0.002 0.000  2  0 no  0.124  0  0 
       1  31 SER QB  94 yes  80.0  78.8  0.141  0.179 0.038  3  0 no  0.694  0  1 
       1  32 VAL QG  93 no   80.0  49.7  0.001  0.003 0.001  3  0 no  0.098  0  0 
       1  33 ASP QB 105 no  100.0   0.0  0.000  0.000 0.000  1  0 no  0.000  0  0 
       1  36 ASP QB 104 no  100.0   0.0  0.000  0.000 0.000  1  0 no  0.000  0  0 
       1  39 SER QB 103 no   50.0  31.4  0.008  0.027 0.019  1  0 no  0.260  0  0 
       1  40 SER QB 102 no   40.0  82.8  0.009  0.011 0.002  1  0 no  0.195  0  0 
       1  41 GLU QB  89 no   30.0  75.1  0.004  0.005 0.001  4  0 no  0.125  0  0 
       1  42 GLY QA  61 no  100.0 100.0  1.413  1.414 0.000  8  0 no  0.046  0  0 
       1  43 ILE QG  38 yes 100.0 100.0  0.121  0.121 0.000 12  1 no  0.000  0  0 
       1  44 PHE QB  26 yes 100.0  99.8  2.426  2.431 0.005 14  4 no  0.104  0  0 
       1  45 VAL QG   4 yes 100.0  99.1 23.881 24.086 0.205 32 11 no  0.487  0  0 
       1  46 SER QB  25 yes 100.0 100.0  2.779  2.780 0.001 14  3 no  0.064  0  0 
       1  47 LYS QB  20 yes  90.0  69.5  2.697  3.881 1.185 16  6 no  0.487  0  0 
       1  47 LYS QG  57 no   45.0  79.6  0.006  0.007 0.001  9  1 no  0.205  0  0 
       1  48 ILE QG  28 yes 100.0  99.9  2.373  2.375 0.002 14  5 no  0.138  0  0 
       1  49 VAL QG   8 no   70.0  52.8  4.289  8.125 3.836 23  7 yes 2.319 27 43 
       1  51 SER QB  90 yes  95.0  71.6  1.477  2.062 0.585  4  2 yes 1.139  1  2 
       1  52 GLY QA  55 yes 100.0  63.8  2.722  4.266 1.544 10  9 yes 1.518  1  1 
       1  53 PRO QB  64 yes 100.0 100.0  0.866  0.866 0.000  8  4 no  0.035  0  0 
       1  53 PRO QD  23 no   90.0  97.6  0.676  0.693 0.017 15 10 no  0.029  0  0 
       1  53 PRO QG  50 yes 100.0  56.2  2.123  3.778 1.655 11  5 no  0.250  0  0 
       1  56 LYS QB  92 no  100.0   0.0  0.000  0.000 0.000  3  0 no  0.000  0  0 
       1  58 GLY QA 106 no  100.0   0.0  0.000  0.000 0.000  1  1 no  0.000  0  0 
       1  59 GLY QA  82 no   60.0  11.8  0.004  0.035 0.031  6  2 no  0.256  0  0 
       1  60 LEU QB  27 yes 100.0  99.4  1.602  1.612 0.010 14  5 no  0.153  0  0 
       1  60 LEU QD   1 no  100.0  87.1 16.192 18.581 2.389 48 28 no  0.213  0  0 
       1  61 GLN QB  70 yes 100.0  99.9  0.367  0.368 0.000  7  2 no  0.064  0  0 
       1  61 GLN QE  84 no  100.0   0.0  0.000  0.480 0.480  6  4 no  0.009  0  0 
       1  61 GLN QG  79 no   65.0  98.5  0.005  0.005 0.000  6  0 no  0.026  0  0 
       1  62 ILE QG  60 no  100.0 100.0  0.286  0.286 0.000  8  0 no  0.000  0  0 
       1  63 HIS QB  91 no   45.0 100.0  0.012  0.012 0.000  3  0 no  0.000  0  0 
       1  64 ASP QB  11 no   70.0  44.1  0.564  1.278 0.714 21 10 yes 0.904  0 32 
       1  65 ARG QB  18 yes 100.0  99.9  0.866  0.867 0.000 17  4 no  0.064  0  0 
       1  65 ARG QD  33 yes 100.0  69.9  3.344  4.787 1.443 13  5 no  0.042  0  0 
       1  65 ARG QG  36 no   40.0  91.7  0.020  0.022 0.002 12  0 no  0.116  0  0 
       1  66 ILE QG  24 no  100.0  99.8  1.519  1.522 0.003 14  3 no  0.064  0  0 
       1  67 ILE QG  12 no  100.0  99.6  2.063  2.071 0.008 19  5 no  0.111  0  0 
       1  68 GLU QB  65 no  100.0  99.8  0.884  0.886 0.002  7  0 no  0.127  0  0 
       1  68 GLU QG  41 yes 100.0  99.5  0.192  0.193 0.001 12  2 no  0.077  0  0 
       1  69 VAL QG   2 no  100.0  99.9 27.737 27.753 0.016 45 12 no  0.163  0  0 
       1  70 ASN QB  34 no  100.0  89.9  0.002  0.003 0.000 13  6 no  0.095  0  0 
       1  70 ASN QD   9 no  100.0  95.1  0.407  0.427 0.021 22  8 no  0.458  0  0 
       1  71 GLY QA  96 no  100.0 100.0  0.377  0.377 0.000  3  2 no  0.000  0  0 
       1  72 ARG QB  45 no  100.0 100.0  0.251  0.251 0.000 12  7 no  0.003  0  0 
       1  72 ARG QD  22 no   70.0  83.4  0.039  0.047 0.008 15  7 no  0.378  0  0 
       1  72 ARG QG  62 yes 100.0  98.7  0.210  0.213 0.003  8  2 no  0.233  0  0 
       1  73 ASP QB  78 no   65.0  68.2  0.299  0.438 0.139  6  0 yes 1.284  4  6 
       1  74 LEU QB  31 yes 100.0 100.0  2.096  2.096 0.000 13  4 no  0.042  0  0 
       1  74 LEU QD   3 no  100.0  99.5 22.723 22.843 0.120 39 13 no  0.040  0  0 
       1  75 SER QB  66 no   60.0  42.2  1.473  3.485 2.013  7  1 yes 1.709 15 22 
       1  76 ARG QB  88 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1  76 ARG QG  81 yes 100.0  89.9  3.859  4.294 0.435  6  1 no  0.009  0  0 
       1  79 HIS QB  77 yes 100.0 100.0  0.417  0.417 0.000  6  0 no  0.000  0  0 
       1  80 ASP QB  76 no  100.0   0.0  0.000  0.000 0.000  6  0 no  0.000  0  0 
       1  81 GLN QB  40 yes 100.0 100.0  0.494  0.494 0.000 12  2 no  0.000  0  0 
       1  81 GLN QE  87 yes 100.0 100.0  0.158  0.158 0.000  4  0 no  0.000  0  0 
       1  81 GLN QG  46 no   25.0  86.8  0.013  0.015 0.002 11  0 no  0.125  0  0 
       1  83 VAL QG  10 yes 100.0  99.8 30.526 30.577 0.052 21  1 no  0.572  0  2 
       1  86 PHE QB  52 no  100.0  99.9  0.253  0.253 0.000 10  0 no  0.029  0  0 
       1  87 LYS QB  39 no   45.0   1.1  0.004  0.363 0.359 12  2 no  0.670  0  6 
       1  87 LYS QE  83 no   50.0  37.0  0.274  0.740 0.466  6  4 yes 1.081  2 12 
       1  87 LYS QG  56 no   45.0  36.6  0.096  0.263 0.167  9  1 no  0.472  0  0 
       1  90 LYS QB  58 no   90.0  86.8  1.654  1.906 0.252  9  2 yes 1.157  2  4 
       1  91 GLU QB  75 no  100.0 100.0  0.363  0.363 0.000  6  0 no  0.035  0  0 
       1  91 GLU QG  42 no   65.0   0.1  0.001  1.116 1.115 12  3 no  0.014  0  0 
       1  92 PRO QB  74 no   50.0   1.9  0.003  0.165 0.161  7  4 no  0.000  0  0 
       1  92 PRO QG  95 no   90.0  76.6  0.312  0.407 0.095  3  2 no  0.000  0  0 
       1  93 ILE QG  48 yes 100.0 100.0  1.885  1.885 0.000 11  3 no  0.024  0  0 
       1  94 VAL QG  35 yes  80.0  72.2  5.068  7.021 1.953 12  0 yes 2.687 10 18 
       1  95 VAL QG   5 no  100.0 100.0 10.914 10.917 0.003 30  7 no  0.098  0  0 
       1  96 GLN QB  16 no  100.0  98.9  2.186  2.211 0.025 18  7 no  0.209  0  0 
       1  96 GLN QE  63 no   80.0  47.1  0.802  1.702 0.900  8  4 no  0.000  0  0 
       1  96 GLN QG  19 yes 100.0  77.1  0.364  0.473 0.108 16  4 no  0.640  0  5 
       1  97 VAL QG   7 yes 100.0  99.5 20.211 20.310 0.100 24  8 no  0.501  0  1 
       1  98 LEU QD  32 no   60.0  26.4  2.519  9.525 7.006 13  5 yes 2.131 26 57 
       1  99 ARG QD  53 no   45.0  15.0  0.539  3.591 3.051 10  4 yes 1.680 10 14 
       1 100 ARG QB  69 no   75.0  91.1  0.246  0.270 0.024  7  2 no  0.536  0  1 
       1 100 ARG QG  68 no   80.0  93.2  0.066  0.071 0.005  7  2 no  0.796  0  1 
       1 104 PRO QD  97 no  100.0   0.0  0.000  0.000 0.000  2  0 no  0.000  0  0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Saturday, May 11, 2024 8:27:37 AM GMT (wattos1)