NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
383913 1k45 5181 cing 4-filtered-FRED Wattos check stereo assignment distance


data_1k45


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        42
    _Stereo_assign_list.Swap_count           1
    _Stereo_assign_list.Swap_percentage      2.4
    _Stereo_assign_list.Deassign_count       1
    _Stereo_assign_list.Deassign_percentage  2.4
    _Stereo_assign_list.Model_count          1
    _Stereo_assign_list.Total_e_low_states   2.442
    _Stereo_assign_list.Total_e_high_states  240.706
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   3 VAL QG 25 no  100.0  40.1  0.000  0.000 0.000  7 0 no  0.008 0 0 
       1  17 VAL QG 31 no  100.0  99.9  3.474  3.476 0.002  5 0 no  0.041 0 0 
       1  18 VAL QG 17 no  100.0  99.9 17.311 17.330 0.018 13 4 no  0.121 0 0 
       1  21 LEU QD 10 no  100.0  99.6  3.603  3.618 0.014 17 5 no  0.080 0 0 
       1  25 VAL QG 28 no  100.0  75.9  1.823  2.401 0.578  6 0 yes 0.760 0 1 
       1  30 LEU QD 14 no  100.0  99.9 12.502 12.513 0.011 15 1 no  0.096 0 0 
       1  32 VAL QG 16 no  100.0  99.9  4.015  4.020 0.005 14 2 no  0.050 0 0 
       1  36 VAL QG 15 no  100.0  99.1  7.281  7.348 0.067 14 2 no  0.259 0 0 
       1  41 VAL QG 23 no  100.0  99.9 16.397 16.407 0.010  8 0 no  0.089 0 0 
       1  42 PHE QB 12 no  100.0  96.0  2.412  2.514 0.101 16 9 no  0.312 0 0 
       1  45 LEU QD 27 no  100.0  99.7  0.936  0.939 0.003  6 0 no  0.051 0 0 
       1  56 VAL QG  6 no  100.0 100.0 11.751 11.756 0.005 19 0 no  0.064 0 0 
       1  57 LEU QD  8 no  100.0  99.9 20.518 20.531 0.013 18 3 no  0.067 0 0 
       1  59 VAL QG  3 no  100.0  97.4  4.650  4.775 0.125 25 1 no  0.351 0 0 
       1  61 VAL QG 29 no  100.0 100.0  5.904  5.904 0.000  6 1 no  0.007 0 0 
       1  64 VAL QG  9 no  100.0 100.0  7.967  7.971 0.004 17 2 no  0.037 0 0 
       1  68 PRO QD 40 no  100.0   0.0  0.000  0.000 0.000  1 0 no  0.000 0 0 
       1  68 PRO QG 39 no  100.0   0.0  0.000  0.000 0.000  1 0 no  0.000 0 0 
       1  69 TRP QB 33 no  100.0   0.0  0.000  0.000 0.000  4 0 no  0.000 0 0 
       1  78 VAL QG  5 no  100.0 100.0  6.871  6.872 0.001 22 2 no  0.022 0 0 
       1  80 VAL QG  2 no  100.0 100.0 14.056 14.058 0.001 26 4 no  0.029 0 0 
       1  84 VAL QG 19 no  100.0  98.9  6.399  6.470 0.070 10 0 no  0.259 0 0 
       1  91 TRP QB 26 no  100.0  99.8  0.481  0.482 0.001  6 0 no  0.027 0 0 
       1  97 ASP QB 36 no  100.0   1.0  0.002  0.214 0.212  2 2 no  0.461 0 0 
       1 100 VAL QG  4 no  100.0  99.9 17.404 17.419 0.015 22 1 no  0.079 0 0 
       1 101 VAL QG  1 no  100.0  99.9 14.386 14.401 0.015 26 2 no  0.067 0 0 
       1 103 PHE QB 30 no  100.0 100.0  2.281  2.281 0.000  6 2 no  0.013 0 0 
       1 105 VAL QG  7 no  100.0  98.6  7.358  7.464 0.106 19 1 no  0.279 0 0 
       1 107 ASN QB 42 no  100.0 100.0  0.668  0.668 0.000  1 1 no  0.000 0 0 
       1 107 ASN QD 34 yes 100.0 100.0  0.767  0.767 0.000  4 1 no  0.000 0 0 
       1 113 TYR QB 24 no  100.0   5.2  0.042  0.809 0.767  8 2 no  0.009 0 0 
       1 116 LEU QD 21 no  100.0 100.0 12.586 12.587 0.001 10 3 no  0.024 0 0 
       1 128 PHE QB 32 no  100.0  98.9  1.608  1.626 0.018  5 1 no  0.107 0 0 
       1 134 VAL QG 20 no  100.0 100.0  6.875  6.878 0.003 10 2 no  0.045 0 0 
       1 140 VAL QG 18 no  100.0 100.0  5.495  5.496 0.001 10 0 no  0.029 0 0 
       1 142 ARG QD 38 no  100.0 100.0  2.236  2.237 0.000  1 0 no  0.011 0 0 
       1 148 GLY QA 37 no  100.0 100.0  0.002  0.002 0.000  1 0 no  0.040 0 0 
       1 152 ASN QD 41 no  100.0   0.0  0.000  0.000 0.000  1 1 no  0.000 0 0 
       1 153 VAL QG 13 no  100.0  98.9  5.291  5.349 0.057 15 1 no  0.232 0 0 
       1 155 ASN QD 35 no  100.0   0.0  0.000  0.212 0.212  2 2 no  0.461 0 0 
       1 158 TYR QB 22 no  100.0 100.0  1.258  1.258 0.000  9 0 no  0.004 0 0 
       1 162 LEU QD 11 no  100.0 100.0 11.649 11.654 0.005 16 0 no  0.060 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Thursday, May 16, 2024 10:47:28 AM GMT (wattos1)