Validation Tools

Pre-deposition data validation servers

• Protein Structure Validation Suite (PSVS) is a useful tool for the assesment of protein structures generated by NMR and X-ray methods. PSVS is broadly applicable for structure quality assessment in structure biology projects.

• iCing Validation Package is part of the Common Interface for NMR structure Generation (CING) package.

• Visualization server will generate DEVise sessions, which include Linear Analysis of Chemical Shifts (LACS) visualizations for uploaded NMR-STAR 3.1 data tables.

• CheckShift - Chemical Shift Reference Check - Center of Applied Molecular Engineering, the University of Salzburg, Austria. It works on NMR-STAR 2.1, SHIFTX or TALOS files. (Firefox is recommended for CheckShift)

Downloadable data validation software

• LACS extensions for re-referencing 15N and 1H chemical shifts (Matlab source code).

• Wattos is a software package consisting of programs for analyzing, annotating, parsing, archiving, and disseminating experimental NMR data deposited by authors world wide into the PDB