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Statistics Calculated for Selected Chemical Shifts from Atoms in the 4 Common DNA Nucleotides


BMRB Entries not included in the calculations for this table contained chemical shifts outside six standard deviations from the mean calculated for the full BMRB database. This criterium was used to eliminate from the calculations chemical shifts from entries where non-standard chemical shift referencing was used. Of the 21164 possible chemical shifts in the BMRB database, 12612 were included in calculating this table.

In the table, the highlighted residue codes provide a link to a gif image of the nucleotide with its atom nomenclature.
Jump to nucleotide: A  C  G  T  

Last updated: 11-17-2009
Nucleotide   Atom    Atom     Number     Minimum     Maximum    Average    Standard    
             Name    Type    of Shifts    Shift       Shift      Shift     Deviation   


DA          H2       H        257          6.37         8.53       7.65       0.38       
DA          H61      H        35           5.62         8.03       7.00       0.86       
DA          H62      H        38           5.66         8.23       6.61       0.72       
DA          H8       H        281          7.21         8.69       8.18       0.18       
DA          H1'      H        282          5.19         6.58       6.07       0.24       
DA          H2'      H        282          1.64         3.01       2.63       0.20       
DA          H2''     H        282          1.94         3.34       2.77       0.19       
DA          H3'      H        281          4.47         5.50       4.95       0.14       
DA          H4'      H        218          2.08         4.90       4.31       0.31       
DA          H5'      H        129          2.91         4.55       4.04       0.25       
DA          H5''     H        123          3.09         4.46       4.03       0.20       
DA          C2       C        73         153.10       155.69     155.08       0.68       
DA          C8       C        79         139.00       142.70     141.70       0.57       
DA          C1'      C        79          82.90        86.27      85.48       0.60       
DA          C2'      C        79          36.23        42.93      40.47       0.85       
DA          C3'      C        75          72.71        81.69      78.71       1.28       
DA          C4'      C        29          86.10        88.71      87.40       0.56       
DA          C5'      C        22          67.41        69.71      68.24       0.53       
DA          N1       N        2          225.20       227.00     226.10       1.27       
DA          N3       N        2          216.30       216.40     216.35       0.07       
DA          N6       N        8           77.40        81.70      80.15       1.35       
DA          N7       N        1          233.50       233.50     233.50       0.00       
DA          P        P        61         -45.29         0.94      -4.43       8.35       

DC          H41      H        120          5.50         8.77       7.58       0.81       
DC          H42      H        119          5.71         9.14       7.26       0.87       
DC          H5       H        326          4.52         6.39       5.61       0.32       
DC          H6       H        326          6.35         8.31       7.52       0.24       
DC          H1'      H        325          5.17         6.57       5.92       0.29       
DC          H2'      H        325          1.21         2.82       2.11       0.22       
DC          H2''     H        320          1.51         2.82       2.36       0.20       
DC          H3'      H        320          4.16         5.28       4.75       0.17       
DC          H4'      H        252          1.58         4.83       4.12       0.36       
DC          H5'      H        157          2.57         4.66       4.01       0.28       
DC          H5''     H        133          3.24         4.52       4.00       0.23       
DC          C5       C        81          97.36        99.55      98.73       0.41       
DC          C6       C        78         141.57       144.70     143.35       0.62       
DC          C1'      C        83          85.10        88.53      87.66       0.89       
DC          C2'      C        71          37.73        42.27      40.72       0.72       
DC          C3'      C        71          71.90        80.00      77.36       1.70       
DC          C4'      C        22          83.93        88.39      86.28       1.30       
DC          C5'      C        21          47.77        68.40      65.52       4.43       
DC          N4       N        9           95.10        98.60      97.44       1.07       
DC          P        P        63          -9.41        52.72       0.76      13.63       

DG          H1       H        182         10.17        13.63      12.53       0.67       
DG          H21      H        38           5.26        10.48       8.10       1.40       
DG          H22      H        36           5.24         9.18       7.18       1.13       
DG          H8       H        350          6.48         8.44       7.80       0.21       
DG          H1'      H        351          5.14         6.50       5.87       0.26       
DG          H2'      H        352          1.82         3.75       2.61       0.22       
DG          H2''     H        348          1.16         3.11       2.65       0.19       
DG          H3'      H        348          4.21         5.37       4.91       0.15       
DG          H4'      H        280          3.60         5.00       4.32       0.18       
DG          H5'      H        182          2.90         4.52       4.07       0.21       
DG          H5''     H        153          3.56         4.47       4.08       0.21       
DG          C8       C        75         136.10       139.89     138.92       0.88       
DG          C1'      C        77          83.66        87.51      85.47       0.77       
DG          C2'      C        74          39.19        44.38      40.39       1.06       
DG          C3'      C        73          72.30        80.04      78.07       1.81       
DG          C4'      C        25          85.44        89.40      87.34       1.04       
DG          C5'      C        22          64.11        69.20      67.31       1.64       
DG          N1       N        9          146.70       147.70     147.04       0.28       
DG          N2       N        4           75.10        75.60      75.38       0.22       
DG          N7       N        3          236.90       237.00     236.93       0.06       
DG          P        P        69         -20.92        47.10      -0.58      11.66       

DT          H3       H        159         10.42        14.46      13.40       0.86       
DT          H6       H        395          4.39         8.33       7.36       0.29       
DT          H7       H        247          0.65         2.03       1.56       0.23       
DT          H1'      H        395          4.69         6.62       5.96       0.26       
DT          H2'      H        396          1.23         2.78       2.12       0.21       
DT          H2''     H        395          0.78         2.84       2.39       0.19       
DT          H3'      H        389          4.06         5.89       4.80       0.15       
DT          H4'      H        237          2.00         4.61       4.10       0.31       
DT          H5'      H        132          2.73         4.38       3.98       0.30       
DT          H5''     H        117          3.47         4.61       4.01       0.20       
DT          C5       C        7           14.30        14.55      14.44       0.10       
DT          C6       C        160        137.20       140.10     139.36       0.49       
DT          C7       C        20          14.20        14.80      14.49       0.16       
DT          C1'      C        154         84.84        87.89      87.16       0.73       
DT          C2'      C        154         37.70        41.53      40.17       0.65       
DT          C3'      C        148         73.35        79.90      77.53       1.54       
DT          C4'      C        21          84.60        88.49      86.19       0.92       
DT          C5'      C        19          63.32        68.40      66.71       1.34       
DT          N3       N        16         158.40       160.50     159.32       0.75       
DT          P        P        60          -4.39        47.79       0.75      11.23       
		   
 
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Last Modified:    Tuesday, 17-Nov-2009 17:00:01 CST