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Statistics Calculated for Selected Chemical Shifts from Atoms in the 4 Common DNA Nucleotides


BMRB Entries not included in the calculations for this table contained chemical shifts outside six standard deviations from the mean calculated for the full BMRB database. This criterium was used to eliminate from the calculations chemical shifts from entries where non-standard chemical shift referencing was used. Of the 34063 possible chemical shifts in the BMRB database, 19322 were included in calculating this table.

In the table, the highlighted residue codes provide a link to a gif image of the nucleotide with its atom nomenclature.
Jump to nucleotide: DA  DC  DG  DT  

Last updated: 09-12-2013
Nucleotide   Atom    Atom     Number     Minimum     Maximum    Average    Standard    
             Name    Type    of Shifts    Shift       Shift      Shift     Deviation   


DA          H2       H        342          6.35         8.53       7.65       0.37       
DA          H61      H        54           5.62        13.40       7.19       1.40       
DA          H62      H        54           5.66        12.90       6.84       1.33       
DA          H8       H        410          7.21         8.69       8.14       0.21       
DA          H1'      H        407          5.19         6.67       6.06       0.24       
DA          H2'      H        408          1.60         3.12       2.61       0.21       
DA          H2''     H        408          1.94         3.34       2.76       0.20       
DA          H3'      H        407          4.39         5.50       4.95       0.15       
DA          H4'      H        311          2.08         5.20       4.31       0.30       
DA          H5'      H        174          2.91         5.69       4.03       0.28       
DA          H5''     H        159          3.09         4.35       4.01       0.20       
DA          C2       C        77         153.10       159.33     155.27       1.06       
DA          C8       C        84         139.00       142.70     141.68       0.59       
DA          C1'      C        87          82.90        91.90      85.58       0.92       
DA          C2'      C        83          36.23        42.93      40.48       0.85       
DA          C3'      C        79          72.71        81.69      78.74       1.26       
DA          C4'      C        33          86.10        88.71      87.42       0.53       
DA          C5'      C        26          47.77        69.71      67.44       4.05       
DA          N1       N        2          225.20       227.00     226.10       1.27       
DA          N3       N        2          216.30       216.40     216.35       0.07       
DA          N6       N        8           77.40        81.70      80.15       1.35       
DA          N7       N        1          233.50       233.50     233.50       0.00       
DA          P        P        124         -4.87         0.94      -3.21       1.78       

DC          H41      H        169          5.50        12.08       7.64       0.87       
DC          H42      H        167          5.71        10.48       7.32       1.05       
DC          H5       H        455          4.52         6.69       5.59       0.33       
DC          H6       H        460          6.28         8.31       7.49       0.24       
DC          H1'      H        459          4.85         6.57       5.89       0.31       
DC          H2'      H        459          1.06         2.82       2.07       0.24       
DC          H2''     H        449          1.51         3.47       2.36       0.22       
DC          H3'      H        437          4.16         5.28       4.73       0.17       
DC          H4'      H        328          1.58         4.83       4.09       0.42       
DC          H5'      H        185          2.57         4.43       3.99       0.29       
DC          H5''     H        158          2.83         4.52       3.97       0.28       
DC          C5       C        87          97.36        99.90      98.75       0.42       
DC          C6       C        81         139.80       144.70     143.25       0.82       
DC          C1'      C        89          85.10        88.53      87.62       0.90       
DC          C2'      C        77          37.73        42.27      40.67       0.73       
DC          C3'      C        77          71.90        80.00      77.38       1.68       
DC          C4'      C        28          83.93        88.39      86.28       1.19       
DC          C5'      C        21          63.00        68.40      66.45       1.78       
DC          N4       N        9           95.10        98.60      97.44       1.07       
DC          P        P        158         -5.03         0.86      -3.43       1.60       

DG          H1       H        381          9.68        13.63      12.06       0.81       
DG          H21      H        55           5.26        10.48       7.45       1.53       
DG          H22      H        52           5.24        10.10       7.65       1.39       
DG          H8       H        657          6.48         8.44       7.80       0.22       
DG          H1'      H        657          4.92         6.54       5.91       0.28       
DG          H2'      H        658          1.56         3.71       2.61       0.23       
DG          H2''     H        648          1.16         3.69       2.67       0.20       
DG          H3'      H        650          4.21         5.90       4.93       0.15       
DG          H4'      H        519          3.60         5.20       4.36       0.18       
DG          H5'      H        304          2.90         5.55       4.10       0.25       
DG          H5''     H        264          3.49         4.47       4.10       0.21       
DG          C8       C        91         135.18       140.20     138.57       1.25       
DG          C1'      C        99          82.17        91.07      85.51       1.24       
DG          C2'      C        81          39.19        44.38      40.38       1.03       
DG          C3'      C        80          72.30        80.04      78.14       1.76       
DG          C4'      C        32          85.44        89.40      87.32       0.95       
DG          C5'      C        28          64.11        69.60      67.56       1.55       
DG          N1       N        9          146.70       147.70     147.04       0.28       
DG          N2       N        4           75.10        75.60      75.38       0.22       
DG          N7       N        3          236.90       237.00     236.93       0.06       
DG          P        P        180         -5.20         0.98      -3.14       1.69       

DT          H3       H        213         10.42        14.46      13.21       1.01       
DT          H6       H        553          6.43         8.02       7.39       0.24       
DT          H7       H        10           0.65         1.99       1.72       0.41       
DT          H71      H        396          0.65         2.73       1.59       0.25       
DT          H72      H        396          0.65         2.72       1.59       0.25       
DT          H73      H        395          0.65         2.72       1.59       0.25       
DT          H1'      H        549          4.69         6.72       5.98       0.29       
DT          H2'      H        551          1.23         2.78       2.13       0.23       
DT          H2''     H        546          0.78         2.90       2.40       0.20       
DT          H3'      H        540          4.06         5.89       4.81       0.17       
DT          H4'      H        348          2.00         4.71       4.15       0.30       
DT          H5'      H        199          2.97         4.38       4.00       0.28       
DT          H5''     H        184          3.34         4.61       4.03       0.22       
DT          C5       C        7           14.30        14.55      14.44       0.10       
DT          C6       C        175        137.18       143.60     139.32       0.65       
DT          C7       C        27          14.00        14.90      14.47       0.21       
DT          C1'      C        168         84.60        92.22      87.27       1.02       
DT          C2'      C        162         37.70        41.53      40.16       0.68       
DT          C3'      C        156         73.35        79.90      77.59       1.53       
DT          C4'      C        28          84.60        88.49      86.25       0.90       
DT          C5'      C        24          63.32        68.40      66.85       1.28       
DT          N3       N        16         158.40       160.50     159.32       0.75       
DT          P        P        134         -5.14         0.67      -3.18       1.85       
		   
 
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Last Modified:    Friday, 13-Sep-2013 23:28:49 CDT