# This file is read automatically when starting CYANA.

name:=znf42    				 # protein name, used for output file names
cyanalib                		 # read standard library
read seq $name.seq      		 # read protein sequence
molecules define 35..128 335..428  	 #for dimer calculations

molecule identity                            # restraints to minimize difference between 
weight_ide=0.04                              # corresponding torsion angles in the two molecules

molecule symdist "CA 35..128" "CA 335..428"   # restraints to minimize difference between the 2
weight_sym=0.004                             # symmetric distances between corresponding atoms in 
                                             # the two selections


rmsdrange:=40..122       # residue range for RMSD calculations

#atom stereo "QG1  94 114 133"                 # sterospecific assignments 
#atom stereo "QD1  8 10 16 25 68 90 125 139"   # sterospecific assignments