data_335 ####################### # Entry information # ####################### save_entry_information _Saveframe_category entry_information _Entry_title ; Conformation of a Heptadecapeptide Comprising the Segment Encephalitogenic in Rhesus Monkeys ; _BMRB_accession_number 335 _BMRB_flat_file_name bmr335.str _Entry_type update _Submission_date 1995-07-31 _Accession_date 1996-03-25 _Entry_origination BMRB _NMR_STAR_version 2.1.1 _Experimental_method NMR _Details . loop_ _Author_ordinal _Author_family_name _Author_given_name _Author_middle_initials _Author_family_title 1 Price William S. . 2 Mendz George L. . 3 Martenson Russell E. . stop_ loop_ _Saveframe_category_type _Saveframe_category_type_count assigned_chemical_shifts 1 stop_ loop_ _Data_type _Data_type_count "13C chemical shifts" 51 stop_ loop_ _Revision_date _Revision_keyword _Revision_author _Revision_detail 2010-06-11 revision BMRB 'Complete natural source information' 1999-06-14 revision BMRB 'Converted to BMRB NMR-STAR V 2.1 format' 1996-03-25 reformat BMRB 'Converted to the BMRB 1996-03-01 STAR flat-file format' 1995-07-31 original BMRB 'Last release in original BMRB flat-file format' stop_ save_ ############################# # Citation for this entry # ############################# save_entry_citation _Saveframe_category entry_citation _Citation_full ; Price, William S., Mendz, George L., Martenson, Russell E., "Conformation of a Heptadecapeptide Comprising the Segment Encephalitogenic in Rhesus Monkeys," Biochemistry 27, 8990-8999 (1988). ; _Citation_title ; Conformation of a Heptadecapeptide Comprising the Segment Encephalitogenic in Rhesus Monkeys ; _Citation_status published _Citation_type journal _CAS_abstract_code . _MEDLINE_UI_code . _PubMed_ID ? loop_ _Author_ordinal _Author_family_name _Author_given_name _Author_middle_initials _Author_family_title 1 Price William S. . 2 Mendz George L. . 3 Martenson Russell E. . stop_ _Journal_abbreviation Biochemistry _Journal_volume 27 _Journal_issue . _Journal_CSD . _Book_chapter_title . _Book_volume . _Book_series . _Book_ISBN . _Conference_state_province . _Conference_abstract_number . _Page_first 8990 _Page_last 8999 _Year 1988 _Details . save_ ################################## # Molecular system description # ################################## save_system_myelin_basic_protein _Saveframe_category molecular_system _Mol_system_name 'myelin basic protein' _Enzyme_commission_number . loop_ _Mol_system_component_name _Mol_label 'myelin basic protein' $myelin_basic_protein stop_ _System_molecular_weight . _System_oligomer_state ? _System_paramagnetic ? _System_thiol_state . _Database_query_date . _Details . save_ ######################## # Monomeric polymers # ######################## save_myelin_basic_protein _Saveframe_category monomeric_polymer _Mol_type polymer _Mol_polymer_class protein _Name_common 'myelin basic protein' _Name_variant 'residues 152-168' _Molecular_mass . _Mol_thiol_state . _Details . ############################## # Polymer residue sequence # ############################## _Residue_count 17 _Mol_residue_sequence FKLGGRDSRSGSPMARR loop_ _Residue_seq_code _Residue_label 1 PHE 2 LYS 3 LEU 4 GLY 5 GLY 6 ARG 7 ASP 8 SER 9 ARG 10 SER 11 GLY 12 SER 13 PRO 14 MET 15 ALA 16 ARG 17 ARG stop_ _Sequence_homology_query_date . _Sequence_homology_query_revised_last_date 2015-11-04 loop_ _Database_name _Database_accession_code _Database_entry_mol_name _Sequence_query_to_submitted_percentage _Sequence_subject_length _Sequence_identity _Sequence_positive _Sequence_homology_expectation_value BMRB 15131 MBP 100.00 176 100.00 100.00 4.31e-01 DBJ BAC85616 "unnamed protein product [Homo sapiens]" 100.00 144 100.00 100.00 2.45e-01 DBJ BAC85961 "unnamed protein product [Homo sapiens]" 100.00 144 100.00 100.00 2.45e-01 DBJ BAE87162 "unnamed protein product [Macaca fascicularis]" 100.00 160 100.00 100.00 3.99e-01 DBJ BAF82582 "unnamed protein product [Homo sapiens]" 100.00 186 100.00 100.00 6.09e-01 DBJ BAG53615 "unnamed protein product [Homo sapiens]" 100.00 144 100.00 100.00 2.45e-01 EMBL CAA35179 "myelin basic protein [Homo sapiens]" 100.00 197 100.00 100.00 7.35e-01 EMBL CAG46717 "MBP [Homo sapiens]" 100.00 160 100.00 100.00 4.16e-01 EMBL CAH92266 "hypothetical protein [Pongo abelii]" 100.00 160 100.00 100.00 3.99e-01 EMBL CAH92798 "hypothetical protein [Pongo abelii]" 100.00 171 100.00 100.00 5.34e-01 EMBL CAI29645 "hypothetical protein [Pongo abelii]" 100.00 171 100.00 100.00 5.34e-01 GB AAA39496 "18.5 kd myelin basic protein, partial [Mus musculus]" 100.00 169 100.00 100.00 4.76e-01 GB AAA39501 "18.5 kd myelin basic protein [Mus musculus]" 100.00 169 100.00 100.00 4.76e-01 GB AAA39502 "21.5 kd myelin basic protein [Mus musculus]" 100.00 195 100.00 100.00 6.44e-01 GB AAA59559 "17.3K myelin basic protein [Homo sapiens]" 100.00 160 100.00 100.00 4.16e-01 GB AAA59562 "myelin basic protein [Homo sapiens]" 100.00 171 100.00 100.00 5.51e-01 PRF 1003243A "protein 21.5K,myelin basic" 100.00 199 100.00 100.00 6.22e-01 PRF 1102236A "protein,myelin basic" 100.00 172 100.00 100.00 5.18e-01 REF NP_001001546 "myelin basic protein [Sus scrofa]" 100.00 173 100.00 100.00 5.40e-01 REF NP_001020252 "myelin basic protein isoform 1 [Homo sapiens]" 100.00 197 100.00 100.00 7.35e-01 REF NP_001020261 "myelin basic protein isoform 3 [Homo sapiens]" 100.00 171 100.00 100.00 5.51e-01 REF NP_001020263 "myelin basic protein isoform 4 [Homo sapiens]" 100.00 160 100.00 100.00 4.16e-01 REF NP_001020272 "Golli-MBP isoform 1 [Homo sapiens]" 100.00 304 100.00 100.00 5.61e-01 SP P02686 "RecName: Full=Myelin basic protein; Short=MBP; AltName: Full=Myelin A1 protein; AltName: Full=Myelin membrane encephalitogenic " 100.00 304 100.00 100.00 5.61e-01 SP P02687 "RecName: Full=Myelin basic protein; Short=MBP; AltName: Full=20 kDa microtubule-stabilizing protein; AltName: Full=Myelin A1 pr" 100.00 169 100.00 100.00 4.91e-01 SP P02688 "RecName: Full=Myelin basic protein; Short=MBP" 100.00 195 100.00 100.00 6.44e-01 SP P06906 "RecName: Full=Myelin basic protein; Short=MBP" 100.00 171 100.00 100.00 5.34e-01 SP P25188 "RecName: Full=Myelin basic protein; Short=MBP" 100.00 167 100.00 100.00 4.65e-01 TPG DAA16031 "TPA: myelin basic protein [Bos taurus]" 100.00 329 100.00 100.00 7.69e-01 stop_ save_ #################### # Natural source # #################### save_natural_source _Saveframe_category natural_source loop_ _Mol_label _Organism_name_common _NCBI_taxonomy_ID _Superkingdom _Kingdom _Genus _Species _Strain _Tissue $myelin_basic_protein 'domestic rabbit' 9986 Eukaryota Metazoa Oryctolagus cuniculus generic muscle stop_ save_ ######################### # Experimental source # ######################### save_experimental_source _Saveframe_category experimental_source loop_ _Mol_label _Production_method _Host_organism_name_common _Genus _Species _Strain _Vector_name $myelin_basic_protein 'not available' . . . . . stop_ save_ ##################################### # Sample contents and methodology # ##################################### ######################## # Sample description # ######################## save_sample_one _Saveframe_category sample _Sample_type solution _Details . save_ ######################### # Experimental detail # ######################### ################################## # NMR Spectrometer definitions # ################################## save_spectrometer_list _Saveframe_category NMR_spectrometer _Manufacturer unknown _Model unknown _Field_strength 0 _Details 'spectrometer information not available' save_ ############################# # NMR applied experiments # ############################# save__1 _Saveframe_category NMR_applied_experiment _Sample_label $sample_one save_ ####################### # Sample conditions # ####################### save_sample_condition_set_one _Saveframe_category sample_conditions _Details . loop_ _Variable_type _Variable_value _Variable_value_error _Variable_value_units pH 2.45 . na temperature 298 . K stop_ save_ #################### # NMR parameters # #################### ############################## # Assigned chemical shifts # ############################## ################################ # Chemical shift referencing # ################################ save_chem_shift_reference_par_set_one _Saveframe_category chemical_shift_reference _Details . loop_ _Mol_common_name _Atom_type _Atom_isotope_number _Atom_group _Chem_shift_units _Chem_shift_value _Reference_method _Reference_type _External_reference_sample_geometry _External_reference_location _External_reference_axis _Indirect_shift_ratio_citation_label _Correction_value_citation_label DSS C . . ppm 0 . . . . . $entry_citation $entry_citation stop_ save_ ################################### # Assigned chemical shift lists # ################################### ################################################################### # Chemical Shift Ambiguity Index Value Definitions # # # # The values other than 1 are used for those atoms with different # # chemical shifts that cannot be assigned to stereospecific atoms # # or to specific residues or chains. # # # # Index Value Definition # # # # 1 Unique (including isolated methyl protons, # # geminal atoms, and geminal methyl # # groups with identical chemical shifts) # # (e.g. ILE HD11, HD12, HD13 protons) # # 2 Ambiguity of geminal atoms or geminal methyl # # proton groups (e.g. ASP HB2 and HB3 # # protons, LEU CD1 and CD2 carbons, or # # LEU HD11, HD12, HD13 and HD21, HD22, # # HD23 methyl protons) # # 3 Aromatic atoms on opposite sides of # # symmetrical rings (e.g. TYR HE1 and HE2 # # protons) # # 4 Intraresidue ambiguities (e.g. LYS HG and # # HD protons or TRP HZ2 and HZ3 protons) # # 5 Interresidue ambiguities (LYS 12 vs. LYS 27) # # 6 Intermolecular ambiguities (e.g. ASP 31 CA # # in monomer 1 and ASP 31 CA in monomer 2 # # of an asymmetrical homodimer, duplex # # DNA assignments, or other assignments # # that may apply to atoms in one or more # # molecule in the molecular assembly) # # 9 Ambiguous, specific ambiguity not defined # # # ################################################################### save_chemical_shift_assignment_data_set_one _Saveframe_category assigned_chemical_shifts _Details . loop_ _Sample_label $sample_one stop_ _Sample_conditions_label $sample_condition_set_one _Chem_shift_reference_set_label $chem_shift_reference_par_set_one _Mol_system_component_name 'myelin basic protein' _Text_data_format . _Text_data . loop_ _Atom_shift_assign_ID _Residue_author_seq_code _Residue_seq_code _Residue_label _Atom_name _Atom_type _Chem_shift_value _Chem_shift_value_error _Chem_shift_ambiguity_code 1 . 1 PHE CA C 55.48 . 1 2 . 1 PHE CB C 38.19 . 1 3 . 1 PHE CD1 C 130.32 . 1 4 . 1 PHE CD2 C 130.32 . 1 5 . 1 PHE CE1 C 130.59 . 1 6 . 1 PHE CE2 C 130.59 . 1 7 . 1 PHE CZ C 129.18 . 1 8 . 2 LYS CA C 54.55 . 1 9 . 2 LYS CB C 30.73 . 1 10 . 2 LYS CG C 23.23 . 1 11 . 2 LYS CD C 27.7 . 1 12 . 2 LYS CE C 40.57 . 1 13 . 3 LEU CA C 53.91 . 1 14 . 3 LEU CB C 41.14 . 1 15 . 3 LEU CG C 27.7 . 1 16 . 3 LEU CD1 C 22.43 . 1 17 . 3 LEU CD2 C 23.5 . 1 18 . 6 ARG CA C 54.95 . 1 19 . 6 ARG CB C 29.3 . 1 20 . 6 ARG CG C 25.72 . 1 21 . 6 ARG CD C 41.89 . 1 22 . 7 ASP CA C 51.55 . 1 23 . 7 ASP CB C 36.79 . 1 24 . 8 SER CA C 57.01 . 1 25 . 8 SER CB C 62.36 . 1 26 . 9 ARG CA C 54.06 . 1 27 . 9 ARG CB C 29.3 . 1 28 . 9 ARG CG C 25.72 . 1 29 . 9 ARG CD C 41.89 . 1 30 . 10 SER CA C 57.01 . 1 31 . 10 SER CB C 62 . 1 32 . 12 SER CA C 54.95 . 1 33 . 12 SER CB C 62.36 . 1 34 . 13 PRO CA C 62.17 . 1 35 . 13 PRO CB C 32.22 . 1 36 . 13 PRO CG C 26.45 . 1 37 . 13 PRO CD C 49.43 . 1 38 . 14 MET CA C 54.76 . 1 39 . 14 MET CB C 31.53 . 1 40 . 14 MET CG C 30.73 . 1 41 . 14 MET CE C 15.62 . 1 42 . 15 ALA CA C 50.98 . 1 43 . 15 ALA CB C 17.88 . 1 44 . 16 ARG CA C 54.55 . 1 45 . 16 ARG CB C 29.3 . 1 46 . 16 ARG CG C 25.72 . 1 47 . 16 ARG CD C 41.89 . 1 48 . 17 ARG CA C 53.82 . 1 49 . 17 ARG CB C 29.47 . 1 50 . 17 ARG CG C 25.72 . 1 51 . 17 ARG CD C 41.89 . 1 stop_ save_