data_191 ####################### # Entry information # ####################### save_entry_information _Saveframe_category entry_information _Entry_title ; One- and two-dimensional NMR studies of yeast phosphoglycerate kinase ; _BMRB_accession_number 191 _BMRB_flat_file_name bmr191.str _Entry_type update _Submission_date 1995-07-31 _Accession_date 1996-03-25 _Entry_origination BMRB _NMR_STAR_version 2.1.1 _Experimental_method NMR _Details . loop_ _Author_ordinal _Author_family_name _Author_given_name _Author_middle_initials _Author_family_title 1 Fairbrother Wayne J. . 2 Bowen Derrick . . 3 Hall Len . . 4 Williams Robert J.P. . stop_ loop_ _Saveframe_category_type _Saveframe_category_type_count assigned_chemical_shifts 1 stop_ loop_ _Data_type _Data_type_count "1H chemical shifts" 2 stop_ loop_ _Revision_date _Revision_keyword _Revision_author _Revision_detail 2010-06-10 revision BMRB 'Complete natural source information' 1999-06-14 revision BMRB 'Converted to BMRB NMR-STAR V 2.1 format' 1996-03-25 reformat BMRB 'Converted to the BMRB 1996-03-01 STAR flat-file format' 1995-07-31 original BMRB 'Last release in original BMRB flat-file format' stop_ save_ ############################# # Citation for this entry # ############################# save_entry_citation _Saveframe_category entry_citation _Citation_full ; Fairbrother, Wayne J., Bowen, Derrick, Hall, Len, Williams, Robert J. P., "One- and two-dimensional NMR studies of yeast phosphoglycerate kinase," Eur. J. Biochem. 184, 617-625 (1989). ; _Citation_title 'One- and two-dimensional NMR studies of yeast phosphoglycerate kinase' _Citation_status published _Citation_type journal _CAS_abstract_code . _MEDLINE_UI_code . _PubMed_ID ? loop_ _Author_ordinal _Author_family_name _Author_given_name _Author_middle_initials _Author_family_title 1 Fairbrother Wayne J. . 2 Bowen Derrick . . 3 Hall Len . . 4 Williams Robert J.P. . stop_ _Journal_abbreviation 'Eur. J. Biochem.' _Journal_volume 184 _Journal_issue . _Journal_CSD . _Book_chapter_title . _Book_volume . _Book_series . _Book_ISBN . _Conference_state_province . _Conference_abstract_number . _Page_first 617 _Page_last 625 _Year 1989 _Details . save_ ################################## # Molecular system description # ################################## save_system_phosphoglycerate_kinase _Saveframe_category molecular_system _Mol_system_name 'phosphoglycerate kinase' _Enzyme_commission_number . loop_ _Mol_system_component_name _Mol_label 'phosphoglycerate kinase' $phosphoglycerate_kinase stop_ _System_molecular_weight . _System_oligomer_state ? _System_paramagnetic ? _System_thiol_state . _Database_query_date . _Details . save_ ######################## # Monomeric polymers # ######################## save_phosphoglycerate_kinase _Saveframe_category monomeric_polymer _Mol_type polymer _Mol_polymer_class protein _Name_common 'phosphoglycerate kinase' _Molecular_mass . _Mol_thiol_state . _Details . ############################## # Polymer residue sequence # ############################## _Residue_count 415 _Mol_residue_sequence ; SLSSKLSVQDSDLKDKRVFI RVDFNVPLDGKKITSQQRIV AALPTIKYVLEHHPRYVVLL SHLGRPNGERNEKYSLAPVA KELQSLLGKDVTFLNDCVSP EVEAAVKASAPGSVILLENL RYHIEEEGSRKVDGQKVKAS KEDVQKFRHELSSLADVYIN DAFGTAHRAHSSXVGFDLPQ RAAGFLLEKELKYFGKALEN PTRPFLAILGGAKVADKIQL IDNLLDKVDSIIIGGGMAFT FKKVLENTEIGDSIFDKAGA EIVPKLMEKAKAKGVEVVLP VDFIIADAFSADANTKTVTD KEGIPAGWQGLDNGPESRKL FAATVAKAKTIVWNGPPGVT EFEKFAAGTKALLDEVVKSS AAGNTVIIGGGDTATVAKKY GVTDKISHVSTGGGASLELL EGKELPGVAFLSEKK ; loop_ _Residue_seq_code _Residue_label 1 SER 2 LEU 3 SER 4 SER 5 LYS 6 LEU 7 SER 8 VAL 9 GLN 10 ASP 11 SER 12 ASP 13 LEU 14 LYS 15 ASP 16 LYS 17 ARG 18 VAL 19 PHE 20 ILE 21 ARG 22 VAL 23 ASP 24 PHE 25 ASN 26 VAL 27 PRO 28 LEU 29 ASP 30 GLY 31 LYS 32 LYS 33 ILE 34 THR 35 SER 36 GLN 37 GLN 38 ARG 39 ILE 40 VAL 41 ALA 42 ALA 43 LEU 44 PRO 45 THR 46 ILE 47 LYS 48 TYR 49 VAL 50 LEU 51 GLU 52 HIS 53 HIS 54 PRO 55 ARG 56 TYR 57 VAL 58 VAL 59 LEU 60 LEU 61 SER 62 HIS 63 LEU 64 GLY 65 ARG 66 PRO 67 ASN 68 GLY 69 GLU 70 ARG 71 ASN 72 GLU 73 LYS 74 TYR 75 SER 76 LEU 77 ALA 78 PRO 79 VAL 80 ALA 81 LYS 82 GLU 83 LEU 84 GLN 85 SER 86 LEU 87 LEU 88 GLY 89 LYS 90 ASP 91 VAL 92 THR 93 PHE 94 LEU 95 ASN 96 ASP 97 CYS 98 VAL 99 SER 100 PRO 101 GLU 102 VAL 103 GLU 104 ALA 105 ALA 106 VAL 107 LYS 108 ALA 109 SER 110 ALA 111 PRO 112 GLY 113 SER 114 VAL 115 ILE 116 LEU 117 LEU 118 GLU 119 ASN 120 LEU 121 ARG 122 TYR 123 HIS 124 ILE 125 GLU 126 GLU 127 GLU 128 GLY 129 SER 130 ARG 131 LYS 132 VAL 133 ASP 134 GLY 135 GLN 136 LYS 137 VAL 138 LYS 139 ALA 140 SER 141 LYS 142 GLU 143 ASP 144 VAL 145 GLN 146 LYS 147 PHE 148 ARG 149 HIS 150 GLU 151 LEU 152 SER 153 SER 154 LEU 155 ALA 156 ASP 157 VAL 158 TYR 159 ILE 160 ASN 161 ASP 162 ALA 163 PHE 164 GLY 165 THR 166 ALA 167 HIS 168 ARG 169 ALA 170 HIS 171 SER 172 SER 173 X 174 VAL 175 GLY 176 PHE 177 ASP 178 LEU 179 PRO 180 GLN 181 ARG 182 ALA 183 ALA 184 GLY 185 PHE 186 LEU 187 LEU 188 GLU 189 LYS 190 GLU 191 LEU 192 LYS 193 TYR 194 PHE 195 GLY 196 LYS 197 ALA 198 LEU 199 GLU 200 ASN 201 PRO 202 THR 203 ARG 204 PRO 205 PHE 206 LEU 207 ALA 208 ILE 209 LEU 210 GLY 211 GLY 212 ALA 213 LYS 214 VAL 215 ALA 216 ASP 217 LYS 218 ILE 219 GLN 220 LEU 221 ILE 222 ASP 223 ASN 224 LEU 225 LEU 226 ASP 227 LYS 228 VAL 229 ASP 230 SER 231 ILE 232 ILE 233 ILE 234 GLY 235 GLY 236 GLY 237 MET 238 ALA 239 PHE 240 THR 241 PHE 242 LYS 243 LYS 244 VAL 245 LEU 246 GLU 247 ASN 248 THR 249 GLU 250 ILE 251 GLY 252 ASP 253 SER 254 ILE 255 PHE 256 ASP 257 LYS 258 ALA 259 GLY 260 ALA 261 GLU 262 ILE 263 VAL 264 PRO 265 LYS 266 LEU 267 MET 268 GLU 269 LYS 270 ALA 271 LYS 272 ALA 273 LYS 274 GLY 275 VAL 276 GLU 277 VAL 278 VAL 279 LEU 280 PRO 281 VAL 282 ASP 283 PHE 284 ILE 285 ILE 286 ALA 287 ASP 288 ALA 289 PHE 290 SER 291 ALA 292 ASP 293 ALA 294 ASN 295 THR 296 LYS 297 THR 298 VAL 299 THR 300 ASP 301 LYS 302 GLU 303 GLY 304 ILE 305 PRO 306 ALA 307 GLY 308 TRP 309 GLN 310 GLY 311 LEU 312 ASP 313 ASN 314 GLY 315 PRO 316 GLU 317 SER 318 ARG 319 LYS 320 LEU 321 PHE 322 ALA 323 ALA 324 THR 325 VAL 326 ALA 327 LYS 328 ALA 329 LYS 330 THR 331 ILE 332 VAL 333 TRP 334 ASN 335 GLY 336 PRO 337 PRO 338 GLY 339 VAL 340 THR 341 GLU 342 PHE 343 GLU 344 LYS 345 PHE 346 ALA 347 ALA 348 GLY 349 THR 350 LYS 351 ALA 352 LEU 353 LEU 354 ASP 355 GLU 356 VAL 357 VAL 358 LYS 359 SER 360 SER 361 ALA 362 ALA 363 GLY 364 ASN 365 THR 366 VAL 367 ILE 368 ILE 369 GLY 370 GLY 371 GLY 372 ASP 373 THR 374 ALA 375 THR 376 VAL 377 ALA 378 LYS 379 LYS 380 TYR 381 GLY 382 VAL 383 THR 384 ASP 385 LYS 386 ILE 387 SER 388 HIS 389 VAL 390 SER 391 THR 392 GLY 393 GLY 394 GLY 395 ALA 396 SER 397 LEU 398 GLU 399 LEU 400 LEU 401 GLU 402 GLY 403 LYS 404 GLU 405 LEU 406 PRO 407 GLY 408 VAL 409 ALA 410 PHE 411 LEU 412 SER 413 GLU 414 LYS 415 LYS stop_ _Sequence_homology_query_date . _Sequence_homology_query_revised_last_date 2015-10-14 loop_ _Database_name _Database_accession_code _Database_entry_mol_name _Sequence_query_to_submitted_percentage _Sequence_subject_length _Sequence_identity _Sequence_positive _Sequence_homology_expectation_value BMRB 1174 "phosphoglycerate kinase" 100.00 414 99.76 99.76 0.00e+00 BMRB 1843 "phosphoglycerate kinase" 100.00 414 99.76 99.76 0.00e+00 PDB 1QPG "3-Phosphoglycerate Kinase, Mutation R65q" 100.00 415 98.31 98.55 0.00e+00 DBJ GAA21922 "K7_Pgk1p [Saccharomyces cerevisiae Kyokai no. 7]" 100.00 416 98.55 98.55 0.00e+00 EMBL CAA42329 "phosphoglycerate kinase [Saccharomyces cerevisiae]" 100.00 416 98.55 98.55 0.00e+00 EMBL CAY78215 "Pgk1p [Saccharomyces cerevisiae EC1118]" 100.00 416 98.55 98.55 0.00e+00 GB AAA88729 "3-phosphoglycerate kinase [Saccharomyces cerevisiae]" 100.00 416 98.55 98.55 0.00e+00 GB AGZ13684 "phosphoglycerate kinase [Saccharomyces sp. 'boulardii']" 100.00 416 98.55 98.55 0.00e+00 GB AHN96068 "PGK1 [synthetic construct]" 100.00 416 98.55 98.55 0.00e+00 GB AHV79271 "PGK1 [synthetic construct]" 100.00 416 98.55 98.55 0.00e+00 GB AHY79691 "Pgk1p [Saccharomyces cerevisiae YJM993]" 100.00 416 98.55 98.55 0.00e+00 REF NP_009938 "phosphoglycerate kinase [Saccharomyces cerevisiae S288c]" 100.00 416 98.55 98.55 0.00e+00 SP P00560 "RecName: Full=Phosphoglycerate kinase" 100.00 416 98.55 98.55 0.00e+00 TPG DAA07490 "TPA: phosphoglycerate kinase [Saccharomyces cerevisiae S288c]" 100.00 416 98.55 98.55 0.00e+00 stop_ save_ #################### # Natural source # #################### save_natural_source _Saveframe_category natural_source loop_ _Mol_label _Organism_name_common _NCBI_taxonomy_ID _Superkingdom _Kingdom _Genus _Species _Strain $phosphoglycerate_kinase yeast 4932 Eukaryota Fungi Saccharomyces cerevisiae MD40/4C stop_ save_ ######################### # Experimental source # ######################### save_experimental_source _Saveframe_category experimental_source loop_ _Mol_label _Production_method _Host_organism_name_common _Genus _Species _Strain _Vector_name $phosphoglycerate_kinase 'not available' yeast Saccharomyces cerevisiae MD40/4C . stop_ save_ ##################################### # Sample contents and methodology # ##################################### ######################## # Sample description # ######################## save_sample_one _Saveframe_category sample _Sample_type solution _Details . save_ ######################### # Experimental detail # ######################### ################################## # NMR Spectrometer definitions # ################################## save_spectrometer_list _Saveframe_category NMR_spectrometer _Manufacturer unknown _Model unknown _Field_strength 0 _Details 'spectrometer information not available' save_ ############################# # NMR applied experiments # ############################# save__1 _Saveframe_category NMR_applied_experiment _Sample_label $sample_one save_ ####################### # Sample conditions # ####################### save_sample_condition_set_one _Saveframe_category sample_conditions _Details . loop_ _Variable_type _Variable_value _Variable_value_error _Variable_value_units pH 7.1 . na temperature 300 . K stop_ save_ #################### # NMR parameters # #################### ############################## # Assigned chemical shifts # ############################## ################################ # Chemical shift referencing # ################################ save_chem_shift_reference_par_set_one _Saveframe_category chemical_shift_reference _Details 'The chemical shift reference is not available at this time.' save_ ################################### # Assigned chemical shift lists # ################################### ################################################################### # Chemical Shift Ambiguity Index Value Definitions # # # # The values other than 1 are used for those atoms with different # # chemical shifts that cannot be assigned to stereospecific atoms # # or to specific residues or chains. # # # # Index Value Definition # # # # 1 Unique (including isolated methyl protons, # # geminal atoms, and geminal methyl # # groups with identical chemical shifts) # # (e.g. ILE HD11, HD12, HD13 protons) # # 2 Ambiguity of geminal atoms or geminal methyl # # proton groups (e.g. ASP HB2 and HB3 # # protons, LEU CD1 and CD2 carbons, or # # LEU HD11, HD12, HD13 and HD21, HD22, # # HD23 methyl protons) # # 3 Aromatic atoms on opposite sides of # # symmetrical rings (e.g. TYR HE1 and HE2 # # protons) # # 4 Intraresidue ambiguities (e.g. LYS HG and # # HD protons or TRP HZ2 and HZ3 protons) # # 5 Interresidue ambiguities (LYS 12 vs. LYS 27) # # 6 Intermolecular ambiguities (e.g. ASP 31 CA # # in monomer 1 and ASP 31 CA in monomer 2 # # of an asymmetrical homodimer, duplex # # DNA assignments, or other assignments # # that may apply to atoms in one or more # # molecule in the molecular assembly) # # 9 Ambiguous, specific ambiguity not defined # # # ################################################################### save_chemical_shift_assignment_data_set_one _Saveframe_category assigned_chemical_shifts _Details . loop_ _Sample_label $sample_one stop_ _Sample_conditions_label $sample_condition_set_one _Chem_shift_reference_set_label $chem_shift_reference_par_set_one _Mol_system_component_name 'phosphoglycerate kinase' _Text_data_format . _Text_data . loop_ _Atom_shift_assign_ID _Residue_author_seq_code _Residue_seq_code _Residue_label _Atom_name _Atom_type _Chem_shift_value _Chem_shift_value_error _Chem_shift_ambiguity_code 1 . 342 PHE HE1 H 6.59 . 1 2 . 342 PHE HE2 H 6.59 . 1 stop_ save_