BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 7415

Title: Evidence of reciprocical reorientation of the catalytic and hemopexin-like domains of full-length MMP-12   PubMed: 18465858

Authors: Bertini, Ivano; Calderone, Vito; Fragai, Marco; Jaiswal, Rahul; Luchinat, Claudio; Melikian, Maxime; Mylonas, Efstratios; Svergun, Dmitri

Citation: Bertini, I.; Calderone, V.; Fragai, M.; Jaiswal, R.; Luchinat, C.; Melikian, M.; Mylonas, E.; Svergun, D.. "Evidence of reciprocal reorientation of the catalytic and hemopexin-like domains of full-length MMP-12"  J. Am. Chem. Soc. 130, 7011-7022 (2008).

Assembly members:
CAT_DOMAIN, polymer, 159 residues, Formula weight is not available
CD (CADMIUM ION), non-polymer, 112.411 Da.

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo Sapiens

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):
CAT_DOMAIN: MGPVWRKHYITYRINNYTPD MNREDVDYAIRKAFQVWSNV TPLKFSKINTGMADILVVFA RGAHGDFHAFDGKGGILAHA FGPGSGIGGDAHFDEDEFWT THSGGTNLFLTAVHEIGHSL GLGHSSDPKAVMFPTYKYVD INTFRLSADDIRGIQSLYG

Data sets:
Data typeCount
T1 relaxation values129
T2 relaxation values129

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1Catalytic Domain1
2Cadmium ion2

Entities:

Entity 1, Catalytic Domain 159 residues - Formula weight is not available

1   METGLYPROVALTRPARGLYSHISTYRILE
2   THRTYRARGILEASNASNTYRTHRPROASP
3   METASNARGGLUASPVALASPTYRALAILE
4   ARGLYSALAPHEGLNVALTRPSERASNVAL
5   THRPROLEULYSPHESERLYSILEASNTHR
6   GLYMETALAASPILELEUVALVALPHEALA
7   ARGGLYALAHISGLYASPPHEHISALAPHE
8   ASPGLYLYSGLYGLYILELEUALAHISALA
9   PHEGLYPROGLYSERGLYILEGLYGLYASP
10   ALAHISPHEASPGLUASPGLUPHETRPTHR
11   THRHISSERGLYGLYTHRASNLEUPHELEU
12   THRALAVALHISGLUILEGLYHISSERLEU
13   GLYLEUGLYHISSERSERASPPROLYSALA
14   VALMETPHEPROTHRTYRLYSTYRVALASP
15   ILEASNTHRPHEARGLEUSERALAASPASP
16   ILEARGGLYILEGLNSERLEUTYRGLY

Entity 2, Cadmium ion 1 residues - Cd - 112.411 Da.

1   CD

Samples:

sample_1: CAT_DOMAIN, [U-13C; U-15N], mM; NaCl 300 mM

sample_conditions_1: ionic strength: 300 mM; pH: 7.2; pressure: 1 ATM; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
3D_15N-separated_NOESYsample_1not availablenot available
3D_13C-separated_NOESYsample_1not availablenot available
2D 1H-15N HSQCsample_1not availablenot available
3D HNCOsample_1not availablenot available
3D HNCAsample_1not availablenot available
3D HN(CO)CAsample_1not availablenot available
3D CBCA(CO)NHsample_1not availablenot available
3D HNCACBsample_1not availablenot available
3D HCCH-TOCSYsample_1not availablenot available
3D HBHA(CO)NHsample_1not availablenot available
3D HNHAsample_1not availablenot available
2D 1H-15N HSQC T1sample_1not availablenot available
2D 1H-15N HSQC T2sample_1not availablenot available
2D 1H-15N HSQC NOEsample_1not availablenot available
2D 1H-15N HSQC IPAPsample_1not availablenot available

Software:

No software information available

NMR spectrometers:

  • Bruker AVANCE 900 MHz
  • Bruker DRX 500 MHz
  • Bruker Avance 700 MHz

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