BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 7007

Title: Solution structure of At5g39720.1 from Arabidopsis thaliana   PubMed: 16754964

Authors: Volkman, B.; Peterson, F.; Lytle, B.

Citation: Lytle, B.; Peterson, F.; Tyler, E.; Newman, C.; Vinarov, D.; Markley, J.; Volkman, B.. "Solution structure of Arabidopsis thaliana protein At5g39720.1, a member of the AIG2-like protein family"  Acta Crystallograph Sect. F Struct. Biol. Cryst. Commun. 62, 490-493 (2006).

Assembly members:
AT5G39720, polymer, 173 residues, Formula weight is not available

Natural source:   Common Name: Thale cress   Taxonomy ID: 3702   Superkingdom: Eukaryota   Kingdom: Viridiplantae   Genus/species: Arabidopsis thaliana

Experimental source:   Production method: cell free synthesis

Entity Sequences (FASTA):
AT5G39720: GHHHHHHLECSSDSLQLHNV FVYGSFQDPDVINVMLDRTP EIVSATLPGFQRFRLKGRLY PCIVPSEKGEVHGKVLMGVT SDELENLDAVEGNEYERVTV GIVREDNSEKMAVKTYMWIN KADPDMFGEWNFEEWKRLHK KKFIETFKKIMECKKKPQGQ GNDDISHVLREDQ

Data sets:
Data typeCount
13C chemical shifts660
15N chemical shifts162
1H chemical shifts1002

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1AT5G39720.1 protein1

Entities:

Entity 1, AT5G39720.1 protein 173 residues - Formula weight is not available

1   GLYHISHISHISHISHISHISLEUGLUCYS
2   SERSERASPSERLEUGLNLEUHISASNVAL
3   PHEVALTYRGLYSERPHEGLNASPPROASP
4   VALILEASNVALMETLEUASPARGTHRPRO
5   GLUILEVALSERALATHRLEUPROGLYPHE
6   GLNARGPHEARGLEULYSGLYARGLEUTYR
7   PROCYSILEVALPROSERGLULYSGLYGLU
8   VALHISGLYLYSVALLEUMETGLYVALTHR
9   SERASPGLULEUGLUASNLEUASPALAVAL
10   GLUGLYASNGLUTYRGLUARGVALTHRVAL
11   GLYILEVALARGGLUASPASNSERGLULYS
12   METALAVALLYSTHRTYRMETTRPILEASN
13   LYSALAASPPROASPMETPHEGLYGLUTRP
14   ASNPHEGLUGLUTRPLYSARGLEUHISLYS
15   LYSLYSPHEILEGLUTHRPHELYSLYSILE
16   METGLUCYSLYSLYSLYSPROGLNGLYGLN
17   GLYASNASPASPILESERHISVALLEUARG
18   GLUASPGLN

Samples:

sample_1: AT5G39720, [U-15N; U-13C], 0.9 mM; deuterated Bis-Tris 10 mM; NaCl 100 mM; Dithiothreitol 5 mM; H2O 95%; D2O 5%

sample_cond_1: ionic strength: 101 mM; pH: 7.0; pressure: 1 atm; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
3D 15N-separated NOESYnot availablenot availablenot available
3D 13C-separated NOESYnot availablenot availablenot available
3D 13C-separated NOESY (AROMATIC)not availablenot availablenot available

Software:

X-PLOR NIH v2.9.3 - refinement

xwinnmr v3.5 -

NMRPipe v2004 -

SPSCAN v1.1.0 -

XEASY v1.3 -

GARANT v2.1 -

NMR spectrometers:

  • Bruker DRX 600 MHz

Related Database Links:

PDB
DBJ BAB11378
GB AAX49363 ABN04775 AED94467
REF NP_198788
SP Q9FIX2