BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 6980

Title: Chemical Shift Assignment of human allograft inflammatory factor I

Authors: Song, Jikui; Tyler, Robert; Loushin Newman, Carrie; Vinarov, Dmitriy; Markley, John

Citation: Song, Jikui; Tyler, Robert; Loushin Newman, Carrie; Vinarov, Dmitriy; Markley, John. "Solution Structure of Human Allograft Inflammatory Factor I"  . ., .-..

Assembly members:
Allograft inflammatory factor 1, polymer, 150 residues, Formula weight is not available
CA, non-polymer, 40.078 Da.

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: cell free synthesis

Entity Sequences (FASTA):
Allograft inflammatory factor 1: GPLESQTRDLQGGKAFGLLK AQQEERLDEINKQFLDDPKY SSDEDLPSKLEGFKEKYMEF DLNGNGDIDIMSLKRMLEKL GVPKTHLELKKLIGEVSSGS GETFSYPDFLRMMLGKRSAI LKMILMYEEKAREKEKPTGP PAKKAISELP

Data sets:
Data typeCount
13C chemical shifts591
15N chemical shifts144
1H chemical shifts860

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1BC0094741
2CALCIUM (II) ION2

Entities:

Entity 1, BC009474 150 residues - Formula weight is not available

1   GLYPROLEUGLUSERGLNTHRARGASPLEU
2   GLNGLYGLYLYSALAPHEGLYLEULEULYS
3   ALAGLNGLNGLUGLUARGLEUASPGLUILE
4   ASNLYSGLNPHELEUASPASPPROLYSTYR
5   SERSERASPGLUASPLEUPROSERLYSLEU
6   GLUGLYPHELYSGLULYSTYRMETGLUPHE
7   ASPLEUASNGLYASNGLYASPILEASPILE
8   METSERLEULYSARGMETLEUGLULYSLEU
9   GLYVALPROLYSTHRHISLEUGLULEULYS
10   LYSLEUILEGLYGLUVALSERSERGLYSER
11   GLYGLUTHRPHESERTYRPROASPPHELEU
12   ARGMETMETLEUGLYLYSARGSERALAILE
13   LEULYSMETILELEUMETTYRGLUGLULYS
14   ALAARGGLULYSGLULYSPROTHRGLYPRO
15   PROALALYSLYSALAILESERGLULEUPRO

Entity 2, CALCIUM (II) ION - Ca - 40.078 Da.

1   CA

Samples:

sample_1: Allograft inflammatory factor 1 0.5 ± 0.1 mM; MOPS 10 ± 1 mM; NaCl 100 ± 5 mM

conditions_1: ionic strength: 100 mM; pH: 7.0; pressure: 1 atm; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
1H,15N-HSQCsample_1not availableconditions_1
1H,13C-HSQCsample_1not availableconditions_1
HNCACBsample_1not availableconditions_1
CBCACONHsample_1not availableconditions_1
HCCHTOCSYsample_1not availableconditions_1
CCONHsample_1not availableconditions_1
HCCONHsample_1not availableconditions_1
3D C13NOESYsample_1not availableconditions_1
3D N15NOESYsample_1not availableconditions_1
HBACONHsample_1not availableconditions_1
HBCBCGCDHDsample_1not availableconditions_1
HBCBCGCDCEHEsample_1not availableconditions_1

Software:

No software information available

NMR spectrometers:

  • Varian Inova 600 MHz
  • Bruker DMX 500 MHz
  • Bruker DMX 750 MHz

Related Database Links:

PDB
DBJ BAA13088 BAB63392 BAD69720 BAF83460
EMBL CAA75060 CAA75062 CAG46950
GB AAB05003 AAD18087 AAF98708 AAG39110 AAH09474
REF NP_001040583 NP_001614 NP_116573 XP_001154743 XP_002816779
SP P55008 Q5TM25