BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 6549

Title: Sequential Backbone Assignment and Secondary Structure of Peroxisome Proliferator-Activated Receptor g Ligand Binding Domain   PubMed: 16132831

Authors: Riepl, Hubert; Hartl, Rainer; Bauer, Margit; Nar, Herbert; Kauschke, Stefan; Kalbitzer, Hans Robert; Maurer, Till

Citation: Riepl, Hubert; Hartl, Rainer; Bauer, Margit; Nar, Herbert; Kauschke, Stefan; Kalbitzer, Hans Robert; Maurer, Till. "Sequential Backbone Assignment of Peroxisome Proliferator-Activated Receptor-g Ligand Binding Domain"  J. Biomol. NMR 32, 259-259 (2005).

Assembly members:
peroxisome proliferator-activated receptor gamma, polymer, 270 residues, Formula weight is not available

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
peroxisome proliferator-activated receptor gamma: ESADLRALAKHLYDSYIKSF PLTKAKARAILTGKTTDKSP FVIYDMNSLMMGEDKIKFKH ITPLQEQSKEVAIRIFQGCQ FRSVEAVQEITEYAKSIPGF VNLDLNDQVTLLKYGVHEII YTMLASLMNKDGVLISEGQG FMTREFLKSLRKPFGDFMEP KFEFAVKFNALELDDSDLAI FIAVIILSGDRPGLLNVKPI EDIQDNLLQALELQLKLNHP ESSQLFAKLLQKMTDLRQIV TEHVQLLQVIKKTETDMSLH PLLQEIYKDL

Data sets:
Data typeCount
13C chemical shifts692
15N chemical shifts225
1H chemical shifts225

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1LBD Pparg1

Entities:

Entity 1, LBD Pparg 270 residues - Formula weight is not available

1   GLUSERALAASPLEUARGALALEUALALYS
2   HISLEUTYRASPSERTYRILELYSSERPHE
3   PROLEUTHRLYSALALYSALAARGALAILE
4   LEUTHRGLYLYSTHRTHRASPLYSSERPRO
5   PHEVALILETYRASPMETASNSERLEUMET
6   METGLYGLUASPLYSILELYSPHELYSHIS
7   ILETHRPROLEUGLNGLUGLNSERLYSGLU
8   VALALAILEARGILEPHEGLNGLYCYSGLN
9   PHEARGSERVALGLUALAVALGLNGLUILE
10   THRGLUTYRALALYSSERILEPROGLYPHE
11   VALASNLEUASPLEUASNASPGLNVALTHR
12   LEULEULYSTYRGLYVALHISGLUILEILE
13   TYRTHRMETLEUALASERLEUMETASNLYS
14   ASPGLYVALLEUILESERGLUGLYGLNGLY
15   PHEMETTHRARGGLUPHELEULYSSERLEU
16   ARGLYSPROPHEGLYASPPHEMETGLUPRO
17   LYSPHEGLUPHEALAVALLYSPHEASNALA
18   LEUGLULEUASPASPSERASPLEUALAILE
19   PHEILEALAVALILEILELEUSERGLYASP
20   ARGPROGLYLEULEUASNVALLYSPROILE
21   GLUASPILEGLNASPASNLEULEUGLNALA
22   LEUGLULEUGLNLEULYSLEUASNHISPRO
23   GLUSERSERGLNLEUPHEALALYSLEULEU
24   GLNLYSMETTHRASPLEUARGGLNILEVAL
25   THRGLUHISVALGLNLEULEUGLNVALILE
26   LYSLYSTHRGLUTHRASPMETSERLEUHIS
27   PROLEULEUGLNGLUILETYRLYSASPLEU

Samples:

sample_1: ligand binding domain of peroxisome proliferator-activated receptor gamma mM

Ex-cond_1: pH: 7.4; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
not availablesample_1not availableEx-cond_1

Software:

No software information available

NMR spectrometers:

  • unknown unknown 0 MHz

Related Database Links:

BMRB 15518 17975 17976 17977
PDB
DBJ BAA18949 BAA23354 BAA32540 BAA36485 BAD20642
EMBL CAA07224 CAA07225 CAA62152 CAA62153 CAA73032
GB AAA19971 AAA62110 AAA62277 AAA80314 AAB04028
PIR JE0279
REF NP_001019803 NP_001028032 NP_001075617 NP_001094391 NP_001106647
SP O18924 O18971 O19052 O62807 O88275
TPG DAA16769