BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 6464

Title: Structure of the hypothetical Arabidopsis thaliana protein At1g16640.1   PubMed: 16081658

Authors: Peterson, F.; Waltner, J.; Lytle, B.; Volkman, B.

Citation: Waltner, J.; Peterson, F.; Lytle, B.; Volkman, B.. "Structure of the B3 domain from Arabidopsis thaliana protein At1g16640."  Protein Sci. 14, 2478-2483 (2005).

Assembly members:
At1g16640, polymer, 104 residues, Formula weight is not available

Natural source:   Common Name: Arabidopsis thaliana   Taxonomy ID: 3702   Superkingdom: Eukaryota   Kingdom: Viridiplantae   Genus/species: Arabidopsis thaliana

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
At1g16640: GSMADTGEVQFMKPFISEKS SKSLEIPLGFNEYFPAPFPI TVDLLDYSGRSWTVRMKKRG EKVFLTVGWENFVKDNNLED GKYLQFIYDRDRTFYVIIYG HNMC

Data sets:
Data typeCount
1H chemical shifts614
13C chemical shifts370
15N chemical shifts99

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1At1g166401

Entities:

Entity 1, At1g16640 104 residues - Formula weight is not available

1   GLYSERMETALAASPTHRGLYGLUVALGLN
2   PHEMETLYSPROPHEILESERGLULYSSER
3   SERLYSSERLEUGLUILEPROLEUGLYPHE
4   ASNGLUTYRPHEPROALAPROPHEPROILE
5   THRVALASPLEULEUASPTYRSERGLYARG
6   SERTRPTHRVALARGMETLYSLYSARGGLY
7   GLULYSVALPHELEUTHRVALGLYTRPGLU
8   ASNPHEVALLYSASPASNASNLEUGLUASP
9   GLYLYSTYRLEUGLNPHEILETYRASPARG
10   ASPARGTHRPHETYRVALILEILETYRGLY
11   HISASNMETCYS

Samples:

sample_1: At1g16640, [U-15N; U-13C], 0.8 mM; PO4 20 mM; NaCl 50 mM; H2O 90%; D2O 10%

sample_cond_1: pH: 7.0; temperature: 298 K; ionic strength: 70 mM; pressure: 1 atm

Experiments:

NameSampleSample stateSample conditions
3D 13C-separated NOESY (aliphatic)not availablenot availablenot available
3D 15N-separated NOESYnot availablenot availablenot available
3D 13C-separated NOESY (aromatic)not availablenot availablenot available

Software:

XWINNMR v3.5 - collection

NMRPipe v2004 - processing

SPSCAN - data analysis

XEASY v1.3 - data analysis

GARANT v2.1 - data analysis

CYANA v1.0.6 - structure solution

X-PLOR vNIH - refinement

NMR spectrometers:

  • Bruker AVANCE 600 MHz

Related Database Links:

PDB
DBJ BAH30298
GB AAG10819 AAS99655 AAT41794 AEE29479
REF NP_173109
SP Q9FX77