BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 6443

Title: Assignments of At5g01610, an Arabidopsis thaliana protein containign DUF583 domain

Authors: Zhao, Qin; Cornilescu, Claudia; Lee, Min; Markley, John

Citation: Zhao, Qin; Cornilescu, Claudia; Lee, Min; Markley, John. "Solution NMR structure of At5g01610, an Arabdopsis protein containing DUF538 domain"  . ., .-..

Assembly members:
At5g01610, polymer, 170 residues, 18952.7 Da.

Natural source:   Common Name: Arabidopsis thaliana   Taxonomy ID: 3702   Superkingdom: Eukaryota   Kingdom: Viridiplantae   Genus/species: Arabidopsis thaliana

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
At5g01610: SDQIFNKVGSYWLGQKANKQ FDSVGNDLNSVSTSIEGGTK WLVNKIKGKMQKPLPELLKE YDLPIGIFPGDATNYEFDEE TKKLTVLIPSICEVGYKDSS VLKFTTTVTGHLEKGKLTDV EGIKTKVMIWVKVTSISTDA SKVYFTAGMKKSRSRDAYGV QRNGLRVDKF

Data sets:
Data typeCount
1H chemical shifts778
13C chemical shifts461
15N chemical shifts115

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1At5g016101

Entities:

Entity 1, At5g01610 170 residues - 18952.7 Da.

1   SERASPGLNILEPHEASNLYSVALGLYSER
2   TYRTRPLEUGLYGLNLYSALAASNLYSGLN
3   PHEASPSERVALGLYASNASPLEUASNSER
4   VALSERTHRSERILEGLUGLYGLYTHRLYS
5   TRPLEUVALASNLYSILELYSGLYLYSMET
6   GLNLYSPROLEUPROGLULEULEULYSGLU
7   TYRASPLEUPROILEGLYILEPHEPROGLY
8   ASPALATHRASNTYRGLUPHEASPGLUGLU
9   THRLYSLYSLEUTHRVALLEUILEPROSER
10   ILECYSGLUVALGLYTYRLYSASPSERSER
11   VALLEULYSPHETHRTHRTHRVALTHRGLY
12   HISLEUGLULYSGLYLYSLEUTHRASPVAL
13   GLUGLYILELYSTHRLYSVALMETILETRP
14   VALLYSVALTHRSERILESERTHRASPALA
15   SERLYSVALTYRPHETHRALAGLYMETLYS
16   LYSSERARGSERARGASPALATYRGLYVAL
17   GLNARGASNGLYLEUARGVALASPLYSPHE

Samples:

sample_1: At5g01610, [U-95% 13C; U-90% 15N], 10 mg/mL; NaPi 20 mM; NaCl 25 mM

conditions_1: pH: 5.18; ionic strength: 0.025 M; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
HNCAnot availablenot availablenot available
HNCACBnot availablenot availablenot available
CBCACONHnot availablenot availablenot available
CCONHnot availablenot availablenot available
HCCONHnot availablenot availablenot available
HBHACONHnot availablenot availablenot available
HCCHTOCSYnot availablenot availablenot available
HCCHCOSYnot availablenot availablenot available
15N NOESYnot availablenot availablenot available
13C NOESYnot availablenot availablenot available
15N T1not availablenot availablenot available
15N T2not availablenot availablenot available
15N htNOEnot availablenot availablenot available
HNCOnot availablenot availablenot available

Software:

No software information available

NMR spectrometers:

  • Varian Inova 600 MHz

Related Database Links:

PDB
DBJ BAE99748
EMBL CAB82277
GB AAM63344 AAO44063 AED90365 EFH49261
REF NP_195781 XP_002873002
SP Q9M015