BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 6348

Title: 13C, 15N solid state NMR chemical shift assignments for the intrinsic transmembrane light-harvesting 2 protein complex   PubMed: 15754054

Authors: van Gammeren, Adriaan; Hulsbergen, Frans; Hollander, Johan; de Groot, Huub

Citation: van Gammeren, Adriaan; Hulsbergen, Frans; Hollander, Johan; de Groot, Huub. "Residual backbone and side-chain 13C and 15N resonance assignments of the intrinsic transmembrane light-harvesting 2 protein complex by solid state Magic Angle Spinning NMR spectroscopy"  J. Biomol. NMR 31, 279-293 (2005).

Assembly members:
alpha-subunit, polymer, 53 residues, Formula weight is not available
Beta-subunit, polymer, 41 residues, Formula weight is not available
RG1, non-polymer, 715.013 Da.
BCL, non-polymer, 911.504 Da.

Natural source:   Common Name: purple bacterium   Taxonomy ID: 1074   Superkingdom: Bacteria   Kingdom: not available   Genus/species: Rhodopseudomonas acidophila

Experimental source:   Production method: Purified from the natural source

Entity Sequences (FASTA):
alpha-subunit: MNQGKIWTVVNPAIGIPALL GSVTVIAILVHLAILSHTTW FPAYWQGGVKKAA
Beta-subunit: ATLTAEQSEELHKYVIDGTR VFLGLALVAHFLAFSATPWL H

Data sets:
Data typeCount
13C chemical shifts310
15N chemical shifts81

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1Chain 1, Alpha-subunit1
2Chain 1, Beta-subunit2
3Chain 2, Alpha-subunit1
4Chain 2, Beta-subunit2
5Chain 3, Alpha-subunit1
6Chain 3, Beta-subunit2
7Chain 4, Alpha-subunit1
8Chain 4, Beta-subunit2
9Chain 5, Alpha-subunit1
10Chain 5, Beta-subunit2
11Chain 6, Alpha-subunit1
12Chain 6, Beta-subunit2
13Chain 7, Alpha-subunit1
14Chain 7, Beta-subunit2
15Chain 8, Alpha-subunit1
16Chain 8, Beta-subunit2
17Chain 9, Alpha-subunit1
18Chain 9, Beta-subunit2
19bacteriochlorophylls A, 14
20bacteriochlorophylls A, 24
21bacteriochlorophylls A, 34
22rhodopin glucoside, 13
23rhodopin glucoside, 23

Entities:

Entity 1, Chain 1, Alpha-subunit 53 residues - Formula weight is not available

1   METASNGLNGLYLYSILETRPTHRVALVAL
2   ASNPROALAILEGLYILEPROALALEULEU
3   GLYSERVALTHRVALILEALAILELEUVAL
4   HISLEUALAILELEUSERHISTHRTHRTRP
5   PHEPROALATYRTRPGLNGLYGLYVALLYS
6   LYSALAALA

Entity 2, Chain 1, Beta-subunit 41 residues - Formula weight is not available

1   ALATHRLEUTHRALAGLUGLNSERGLUGLU
2   LEUHISLYSTYRVALILEASPGLYTHRARG
3   VALPHELEUGLYLEUALALEUVALALAHIS
4   PHELEUALAPHESERALATHRPROTRPLEU
5   HIS

Entity 4, bacteriochlorophylls A, 1 - C55 H74 Mg N4 O6 - 911.504 Da.

1   BCL

Entity 3, rhodopin glucoside, 1 - C46 H66 O6 - 715.013 Da.

1   RG1

Samples:

sample_1: alpha-subunit; Beta-subunit

sample_conditions: pH: .; temperature: 253 K

Experiments:

NameSampleSample stateSample conditions
not availablesample_1not availablesample_conditions

Software:

No software information available

NMR spectrometers:

  • Bruker AV 750 MHz

Related Database Links:

PDB
EMBL CAB52385 CAB52387 CAB52389 CAB52389 CAB52387
PRF 1404442B 1404442B
SP P26790 P26790