BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 5943

Title: Letter to the Editor: 1H, 15N and 13C Resonance Assignments and Secondary Structure Determination of the D2 Domain of the Human Acidic Fibroblast Growth Factor Receptor   PubMed: 15452438

Deposition date: 2003-09-09 Original release date: 2004-09-30

Authors: Hung, Kuo-Wei; Thallampuranam, SureshKumar; Yu, Chin

Citation: Hung, Kuo-Wei; Kumar, T.; Yu, Chin. "Letter to the Editor: 1H, 13C and 15N chemical shift assignments of the D2 domain of the fibroblast growth factor."  J. Biomol. NMR 30, 99-100 (2004).

Assembly members:
Fibroblast growth factor receptor, polymer, 118 residues, 13709.59 Da.

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
Fibroblast growth factor receptor: MNSNNKRAPYWTNTEKMEKR LHAVPAANTVKFRCPAGGNP MPTMRWLKNGKEFKQEHRIG GYKVRNQHWSLIMESVVPSD KGNYTCVVENEYGSINHTYH LDVVLVPRGSLEHHHHHH

Data sets:
Data typeCount
13C chemical shifts336
15N chemical shifts100
1H chemical shifts720

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1FGFRD2 monomer1

Entities:

Entity 1, FGFRD2 monomer 118 residues - 13709.59 Da.

1   METASNSERASNASNLYSARGALAPROTYR
2   TRPTHRASNTHRGLULYSMETGLULYSARG
3   LEUHISALAVALPROALAALAASNTHRVAL
4   LYSPHEARGCYSPROALAGLYGLYASNPRO
5   METPROTHRMETARGTRPLEULYSASNGLY
6   LYSGLUPHELYSGLNGLUHISARGILEGLY
7   GLYTYRLYSVALARGASNGLNHISTRPSER
8   LEUILEMETGLUSERVALVALPROSERASP
9   LYSGLYASNTYRTHRCYSVALVALGLUASN
10   GLUTYRGLYSERILEASNHISTHRTYRHIS
11   LEUASPVALVALLEUVALPROARGGLYSER
12   LEUGLUHISHISHISHISHISHIS

Samples:

sample_1: Fibroblast growth factor receptor, [U-13C; U-15U], 1.5 mM; phosphate 20 mM; NaCL 50 mM; Ammonium sulfate 50 mM; H2O 90%; D2O 10%

sample_cond_1: pH: 6.5; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
HNCAnot availablenot availablenot available
HN(CO)CAnot availablenot availablenot available
HNCOnot availablenot availablenot available
HN(CA)COnot availablenot availablenot available
CBCA(CO)NHnot availablenot availablenot available
HNCACBnot availablenot availablenot available
15N-edited HSQC-NOESYnot availablenot availablenot available
13C-edited HSQC-NOESYnot availablenot availablenot available
TOCSY-HSQCnot availablenot availablenot available
HCCH-TOCSYnot availablenot availablenot available

Software:

No software information available

NMR spectrometers:

  • Bruker AVANCE 600 MHz

Related Database Links:

PDB
DBJ BAA89296 BAA89297 BAA89298 BAA89299 BAA89300
EMBL CAA37014 CAA39654 CAA96492
GB AAA02691 AAA02693 AAA36147 AAA36152 AAA39377
PIR A54846
REF NP_000132 NP_001003336 NP_001076157 NP_001103365 NP_001103366
SP P21802
TPG DAA14698

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts