BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 5884

Title: Assignment of 1H, 13C and 15N resonances of the AXH domain of the transcription factor HBP1   PubMed: 14872137

Authors: de Chiara, Cesira; Kelly, Geoff; Frenkiel, Thomas; Pastore, Annalisa

Citation: de Chiara, Cesira; Kelly, Geoff; Frenkiel, Thomas; Pastore, Annalisa. "Letter to Editor: Assignment of 1H, 13C and 15N resonances of the AXH domain of the transcription factor HBP1 "  J. Biomol. NMR 28, 411-412 (2004).

Assembly members:
HMG box containing protein 1, polymer, 138 residues, Formula weight is not available

Natural source:   Common Name: Mouse   Taxonomy ID: 10090   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Mus musculus

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
HMG box containing protein 1: PSTIWHCFLKGTRLCFHKES NKEWQDVEDFARAASCDNEE EIQMGTHKGYGSDGLKLLSH EESVSFGESVLKLTFDPGTV EDGLLTVECKLDHPFYVKNK GWSSFYPSLTVVQHGIPCCE IHIGDVCLPPGHPDAINF

Data sets:
Data typeCount
1H chemical shifts953
13C chemical shifts618
15N chemical shifts142

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1AXH domain from HBP11

Entities:

Entity 1, AXH domain from HBP1 138 residues - Formula weight is not available

1   PROSERTHRILETRPHISCYSPHELEULYS
2   GLYTHRARGLEUCYSPHEHISLYSGLUSER
3   ASNLYSGLUTRPGLNASPVALGLUASPPHE
4   ALAARGALAALASERCYSASPASNGLUGLU
5   GLUILEGLNMETGLYTHRHISLYSGLYTYR
6   GLYSERASPGLYLEULYSLEULEUSERHIS
7   GLUGLUSERVALSERPHEGLYGLUSERVAL
8   LEULYSLEUTHRPHEASPPROGLYTHRVAL
9   GLUASPGLYLEULEUTHRVALGLUCYSLYS
10   LEUASPHISPROPHETYRVALLYSASNLYS
11   GLYTRPSERSERPHETYRPROSERLEUTHR
12   VALVALGLNHISGLYILEPROCYSCYSGLU
13   ILEHISILEGLYASPVALCYSLEUPROPRO
14   GLYHISPROASPALAILEASNPHE

Samples:

sample_1: HMG box containing protein 1, [U-99% 15N; U-99% 13C], 0.7 mM; Tris HCl 20 mM; NaCl 10 mM; H2O 90%; D2O 10%

sample_2: HMG box containing protein 1, [U-99% 15N], 0.6 mM; Tris HCl 20 mM; NaCl 10 mM; H2O 90%; D2O 10%

condition_1: pH: 7.0; temperature: 303 K

Experiments:

NameSampleSample stateSample conditions

Software:

XEASY -

NMRPipe -

NMR spectrometers:

  • Varian INOVA 600 MHz
  • Varian INOVA 800 MHz

Related Database Links:

PDB
DBJ BAC26060 BAC38611 BAE21520 BAE23919 BAE24968
GB AAA53240 AAH26853 AAH91165 EDL36901 EDL36902
REF NP_037353 NP_694878 NP_818774 XP_005343929 XP_006240037
SP Q62661 Q8R316