BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 4919

Title: Thioredoxin fold as a Homodimerization Module in the Putative Chaperone ERp29: NMR Structures of the Domains and Experimental Model of the 51 kDa Dimer   PubMed: 11435111

Authors: Liepinsh, Edvards; Baryshev, Michail; Sharipo, Anatoly; Ingelman-Sundberg, Magnus; Otting, Gottfried; Mkrtchian, Souren

Citation: Liepinsh, Edvards; Baryshev, Michail; Sharipo, Anatoly; Ingelman-Sundberg, Magnus; Otting, Gottfried; Mkrtchian, Souren. "Thioredoxin fold as a Homodimerization Module in the Putative Chaperone ERp29. NMR Structures of the Domains and Experimental Model of the 51 kDa Dimer"  Structure 9, 457-471 (2001).

Assembly members:
Endoplasmic reticulum protein p29, polymer, 137 residues, 15506 Da.

Natural source:   Common Name: Norway rat   Taxonomy ID: 10116   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Rattus norvegicus

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):
Endoplasmic reticulum protein p29: MRGSHHHHHHGSLHTKGALP LDTVTFYKVIPKSKFVLVKF DTQYPYGEKQDEFKRLAENS ASSDDLLVAEVGISDYGDKL NMELSEKYKLDKESYPVFYL FRDGDFENPVPYSGAVKVGA IQRWLKGQGVYLGMPGC

Data sets:
Data typeCount
1H chemical shifts910
13C chemical shifts251
15N chemical shifts129

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1ERp29 N-domain1

Entities:

Entity 1, ERp29 N-domain 137 residues - 15506 Da.

1   METARGGLYSERHISHISHISHISHISHIS
2   GLYSERLEUHISTHRLYSGLYALALEUPRO
3   LEUASPTHRVALTHRPHETYRLYSVALILE
4   PROLYSSERLYSPHEVALLEUVALLYSPHE
5   ASPTHRGLNTYRPROTYRGLYGLULYSGLN
6   ASPGLUPHELYSARGLEUALAGLUASNSER
7   ALASERSERASPASPLEULEUVALALAGLU
8   VALGLYILESERASPTYRGLYASPLYSLEU
9   ASNMETGLULEUSERGLULYSTYRLYSLEU
10   ASPLYSGLUSERTYRPROVALPHETYRLEU
11   PHEARGASPGLYASPPHEGLUASNPROVAL
12   PROTYRSERGLYALAVALLYSVALGLYALA
13   ILEGLNARGTRPLEULYSGLYGLNGLYVAL
14   TYRLEUGLYMETPROGLYCYS

Samples:

sample_1: Endoplasmic reticulum protein p29, [U-15N; U-13C], 0.3 mM

sample_2: Endoplasmic reticulum protein p29 0.3 mM

Ex-cond_1: pH: 4.9; temperature: 308 K; ionic strength: 0.15 M

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H NOESYnot availablenot availablenot available
2D 1H-1H COSYnot availablenot availablenot available
2D 1H-1H CLEAN TOCSYnot availablenot availablenot available
2D 1H-15N HSQCnot availablenot availablenot available
3D 1H-1H-15N NOESYnot availablenot availablenot available
3D HNCAnot availablenot availablenot available
3D HN(CO)CAnot availablenot availablenot available
3D HNCOnot availablenot availablenot available

Software:

No software information available

NMR spectrometers:

  • Bruker DRX 600 MHz
  • Varian UnityPlus 800 MHz

Related Database Links:

PDB
EMBL CAA64397 CAA71313 CAG46468
GB AAC15239 AAF93170 AAH91129 AAI01494 AAI01496
REF NP_001182664 NP_006808 NP_446413 XP_001139225 XP_002806003
SP P30040 P52555