BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 4653

Title: Solution structure of third intradiskal loop of bovine rhodopsin (residues 268-293)   PubMed: 10888202

Authors: Yeagle, P.; Salloum, A.; Chopra, A.; Bhawsar, N.; Ali, L.

Citation: Yeagle, P.; Salloum, A.; Chopra, A.; Bhawsar, N.; Ali, L.; Kuzmanovski, G.; Alderfer, J.; Albert, A.. "Structures of the intradiskal loops and amino terminus of the G-protein receptor, rhodopsin"  J. Pept. Res. 55, 455-465 (2000).

Assembly members:
RHODOPSIN, polymer, 26 residues, Formula weight is not available

Natural source:   Common Name: cow   Taxonomy ID: 9913   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Bos taurus

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
RHODOPSIN: YAGVAFYIFTHQGSDFGPIF MTIPAF

Data sets:
Data typeCount
1H chemical shifts159

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1RHODOPSIN1

Entities:

Entity 1, RHODOPSIN 26 residues - Formula weight is not available

1   TYRALAGLYVALALAPHETYRILEPHETHR
2   HISGLNGLYSERASPPHEGLYPROILEPHE
3   METTHRILEPROALAPHE

Samples:

sample_1: RHODOPSIN 2 mM; DMSO%

sample_cond_1: temperature: 303 K; pressure: 1 atm

Experiments:

NameSampleSample stateSample conditions
2D NOESYsample_1not availablesample_cond_1
DQF-COSYsample_1not availablesample_cond_1

Software:

FELIX - data analysis

DIANA - structure solution

NMR spectrometers:

  • Bruker AMX 600 MHz

Related Database Links:

PDB
DBJ BAB83621
GB AAA30674 ADB43478 AGL13378 ELR51227
PRF 0811197A 0901188A 0901212A 0906201A 1001148A
REF NP_001014890 XP_004018583 XP_005902896 XP_005955807 XP_006078962
SP P02699 P02700
TPG DAA16827