BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 4652

Title: Solution Structure of Amino Terminus of Bovine Rhodopsin (residues 1-40)   PubMed: 10888202

Authors: Yeagle, P.; Salloum, A.; Chopra, A.; Bhawsar, N.; Ali, L.

Citation: Yeagle, P.; Salloum, A.; Chopra, A.; Bhawsar, N.; Ali, L.; Kuzmanovski, G.; Alderfer, J.; Albert, A.. "Structures of the intradiskal loops and amino terminus of the G-protein receptor, rhodopsin"  J. Pept. Res. 55, 455-465 (2000).

Assembly members:
Rhodopsin, polymer, 40 residues, Formula weight is not available

Natural source:   Common Name: cow   Taxonomy ID: 9913   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Bos taurus

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
Rhodopsin: MNGTEGPNFYVPFSNKTGVV RSPFEAPQYYLAEPWEFSML

Data sets:
Data typeCount
1H chemical shifts253

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1Rhodopsin1

Entities:

Entity 1, Rhodopsin 40 residues - Formula weight is not available

1   METASNGLYTHRGLUGLYPROASNPHETYR
2   VALPROPHESERASNLYSTHRGLYVALVAL
3   ARGSERPROPHEGLUALAPROGLNTYRTYR
4   LEUALAGLUPROTRPGLUPHESERMETLEU

Samples:

sample_1: Rhodopsin 2 mM; DMSO%

sample_cond_1: pressure: 1 atm; temperature: 303 K

Experiments:

NameSampleSample stateSample conditions
2D NOESYsample_1not availablesample_cond_1
DQF-COSYsample_1not availablesample_cond_1

Software:

FELIX - data analysis

DIANA - structure solution

NMR spectrometers:

  • Bruker AMX 600 MHz

Related Database Links:

PDB
DBJ BAB83621
GB AAA30674 AAA30675 ELR51227
PRF 0811197A 0901188A 0901212A 0906201A 1001148A
REF NP_001014890 XP_004018583 XP_005902896 XP_005955807 XP_010860750
SP P02699 P02700
TPG DAA16827