BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 36107

Title: Solution structure of arenicin-3 derivative N2   PubMed: 28611436

Authors: Liu, X.; Wang, J.

Citation: Yang, N.; Liu, X.; Teng, D.; Li, Z.; Wang, X.; Mao, R.; Wang, X.; Hao, Y.; Wang, J.. "Antibacterial and detoxifying activity of NZ17074 analogues with multi-layers of selective antimicrobial actions against Escherichia coli and Salmonella enteritidis"  Sci. Rep. 7, 3392-3392 (2017).

Assembly members:
N2, polymer, 21 residues, 2575.053 Da.

Natural source:   Common Name: Arenicola marina   Taxonomy ID: 6344   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Arenicola not available

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
N2: AFCWNVCVYRNAVRVCHRRC N

Data sets:
Data typeCount
13C chemical shifts60
15N chemical shifts24
1H chemical shifts146

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1entity_11

Entities:

Entity 1, entity_1 21 residues - 2575.053 Da.

1   ALAPHECYSTRPASNVALCYSVALTYRARG
2   ASNALAVALARGVALCYSHISARGARGCYS
3   ASN

Samples:

sample_1: N2 2.0 mM; H2O 90%; D2O, [U-2H], 10%

sample_conditions_1: ionic strength: 0 mM; pH: 4; pressure: 1 atm; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H TOCSYsample_1isotropicsample_conditions_1
2D 1H-1H NOESYsample_1isotropicsample_conditions_1
2D 1H-15N HSQCsample_1isotropicsample_conditions_1
2D 1H-13C HSQCsample_1isotropicsample_conditions_1

Software:

ARIA, Linge, O'Donoghue and Nilges - structure calculation

Analysis, CCPN - chemical shift assignment

CNS, Brunger, Adams, Clore, Gros, Nilges and Read - refinement

NMRPipe, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing

NMR spectrometers:

  • Agilent dd2 600 MHz

Related Database Links: