BMRB Entry 26758

Title:
Backbone 1H, 13C, and 15N Chemical Shift Assignments for p38 gamma MAPK
Deposition date:
2016-03-16
Original release date:
2016-09-29
Authors:
Cordier, Florence; Maisonneuve, Pierre; Caillet-Saguy, Celia; Delepierre, Muriel; Wolff, Nicolas
Citation:

Citation: Maisonneuve, Pierre; Caillet-Saguy, Celia; Vaney, Marie-Christine; Bibi-Zainab, Edoo; Raynal, Bertrand; Delepierre, Muriel; Lafon, Monique; Cordier, Florence; Wolff, Nicolas. "Molecular Basis of The Interaction of the Human Protein Tyrosine Phosphatase Non-receptor Type 4 (PTPN4) with the Mitogen-Activated Protein Kinase p38 gamma"  J. Biol. Chem. 291, 16699-16708 (2016).
PubMed: 27246854

Assembly members:

Assembly members:
p38_gamma, polymer, 367 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pET15b

Data sets:
Data typeCount
13C chemical shifts491
15N chemical shifts154
1H chemical shifts154

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1p38 gamma1

Entities:

Entity 1, p38 gamma 367 residues - Formula weight is not available

1   METSERSERPROPROPROALAARGSERGLY
2   PHETYRARGGLNGLUVALTHRLYSTHRALA
3   TRPGLUVALARGALAVALTYRARGASPLEU
4   GLNPROVALGLYSERGLYALATYRGLYALA
5   VALCYSSERALAVALASPGLYARGTHRGLY
6   ALALYSVALALAILELYSLYSLEUTYRARG
7   PROPHEGLNSERGLULEUPHEALALYSARG
8   ALATYRARGGLULEUARGLEULEULYSHIS
9   METARGHISGLUASNVALILEGLYLEULEU
10   ASPVALPHETHRPROASPGLUTHRLEUASP
11   ASPPHETHRASPPHETYRLEUVALMETPRO
12   PHEMETGLYTHRASPLEUGLYLYSLEUMET
13   LYSHISGLULYSLEUGLYGLUASPARGILE
14   GLNPHELEUVALTYRGLNMETLEULYSGLY
15   LEUARGTYRILEHISALAALAGLYILEILE
16   HISARGASPLEULYSPROGLYASNLEUALA
17   VALASNGLUASPCYSGLULEULYSILELEU
18   ASPPHEGLYLEUALAARGGLNALAASPSER
19   GLUMETTHRGLYTYRVALVALTHRARGTRP
20   TYRARGALAPROGLUVALILELEUASNTRP
21   METARGTYRTHRGLNTHRVALASPILETRP
22   SERVALGLYCYSILEMETALAGLUMETILE
23   THRGLYLYSTHRLEUPHELYSGLYSERASP
24   HISLEUASPGLNLEULYSGLUILEMETLYS
25   VALTHRGLYTHRPROPROALAGLUPHEVAL
26   GLNARGLEUGLNSERASPGLUALALYSASN
27   TYRMETLYSGLYLEUPROGLULEUGLULYS
28   LYSASPPHEALASERILELEUTHRASNALA
29   SERPROLEUALAVALASNLEULEUGLULYS
30   METLEUVALLEUASPALAGLUGLNARGVAL
31   THRALAGLYGLUALALEUALAHISPROTYR
32   PHEGLUSERLEUHISASPTHRGLUASPGLU
33   PROGLNVALGLNLYSTYRASPASPSERPHE
34   ASPASPVALASPARGTHRLEUASPGLUTRP
35   LYSARGVALTHRTYRLYSGLUVALLEUSER
36   PHELYSPROPROARGGLNLEUGLYALAARG
37   VALSERLYSGLUTHRPROLEU

Samples:

sample_1: p38 gamma, [U-100% 15N], 220 uM; NaCl 150 mM; Tris-HCl 50 mM; TCEP 0.5 mM

sample_2: p38 gamma, [U-100% 13C; U-100% 15N; U-80% 2H], 380 uM; NaCl 150 mM; Tris-HCl 50 mM; TCEP 0.5 mM

sample_conditions_1: ionic strength: 150 mM; pH: 7.5; pressure: 1 atm; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-15N HSQCsample_1isotropicsample_conditions_1
2D 1H-15N HSQCsample_2isotropicsample_conditions_1
3D HNCOsample_2isotropicsample_conditions_1
3D HN(CA)COsample_2isotropicsample_conditions_1
3D HNCACBsample_2isotropicsample_conditions_1
3D HNCAsample_2isotropicsample_conditions_1
3D CBCA(CO)NHsample_2isotropicsample_conditions_1

Software:

NMRPipe, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing

VNMRJ, Varian - collection

CCPNMR_Analysis v2.4.1, CCPN - chemical shift assignment, data analysis, peak picking

NMR spectrometers:

  • Varian INOVA 600 MHz
  • Bruker Avance 950 MHz

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks