BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 17011

Title: s34r structure   PubMed: 21147916

Authors: Montserret, Roland; Dubuisson, Jean; Penin, Francois

Citation: Albecka, Anna; Montserret, Roland; Krey, Thomas; Tarr, Alexander; Diesis, Eric; Ball, Jonathan; Descamps, Veronique; Duverlie, Gilles; Rey, Felix; Penin, Francois; Dubuisson, Jean. "Identification of new functional regions in hepatitis C virus envelope glycoprotein E2"  J. Virol. 85, 1777-1792 (2011).

Assembly members:
s34r, polymer, 36 residues, 4031.715 Da.

Natural source:   Common Name: hepatitris C virus   Taxonomy ID: 11103   Superkingdom: virus   Kingdom: not available   Genus/species: Hepacivirus hepatitris C virus

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
s34r: SDLPALSTGLLHLHQNIVDV QYMYGLSPAITKYVVR

Data sets:
Data typeCount
13C chemical shifts125
1H chemical shifts263

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1s34r1

Entities:

Entity 1, s34r 36 residues - 4031.715 Da.

1   SERASPLEUPROALALEUSERTHRGLYLEU
2   LEUHISLEUHISGLNASNILEVALASPVAL
3   GLNTYRMETTYRGLYLEUSERPROALAILE
4   THRLYSTYRVALVALARG

Samples:

sample_1: trifluoroethanol 50%; H2O 50%; DSS 0.01%; s34r 2 mM

sample_conditions_1: pH: 6; pressure: 1 atm; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H NOESYsample_1isotropicsample_conditions_1
2D 1H-1H TOCSYsample_1isotropicsample_conditions_1
2D 1H-13C HSQCsample_1isotropicsample_conditions_1

Software:

SPARKY, Goddard - data analysis

X-PLOR NIH, Schwieters, Kuszewski, Tjandra and Clore - structure solution

NMR spectrometers:

  • Bruker Avance 500 MHz

Related Database Links:

PDB
DBJ BAA00969 BAB32872 BAB32875 BAB32876 BAB32877
GB AAF25611 AAF59943 AAF59944 ABP88215 ADU33368
SP P27960 Q99IB8