BMRB Entry 15764

Title:
Backbone 1H, 13C, and 15N Chemical Shift Assignments for Ca2+-Binding Domain 1 of the Na+/Ca2+ Exchanger in the Absence of Ca2+
Deposition date:
2008-05-09
Original release date:
2008-06-30
Authors:
Johnson, Eric; Bruschweiler-Li, Lei; Showalter, Scott; Vuister, Geerten; Zhang, Fengli; Bruschweiler, Rafael
Citation:

Citation: Johnson, Eric; Bruschweiler-Li, Lei; Showalter, Scott; Vuister, Geerten; Zhang, Fengli; Bruschweiler, Rafael. "Structure and Dynamics of Ca2+-Binding Domain 1 of the Na+/Ca2+ Exchanger in the Presence and in the Absence of Ca2+"  J. Mol. Biol. 377, 945-955 (2008).
PubMed: 18280495

Assembly members:

Assembly members:
CBD1, polymer, 147 residues, 16193 Da.

Natural source:

Natural source:   Common Name: Dog   Taxonomy ID: 9615   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Canis familiaris

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pET23b

Data sets:
Data typeCount
13C chemical shifts356
15N chemical shifts127
1H chemical shifts127

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1CBD11

Entities:

Entity 1, CBD1 147 residues - 16193 Da.

Residues 1-8 represent a non-native affinity tag.

1   METSERHISHISHISHISHISHISVALSER
2   LYSILEPHEPHEGLUGLNGLYTHRTYRGLN
3   CYSLEUGLUASNCYSGLYTHRVALALALEU
4   THRILEILEARGARGGLYGLYASPLEUTHR
5   ASNTHRVALPHEVALASPPHEARGTHRGLU
6   ASPGLYTHRALAASNALAGLYSERASPTYR
7   GLUPHETHRGLUGLYTHRVALVALPHELYS
8   PROGLYGLUTHRGLNLYSGLUILEARGVAL
9   GLYILEILEASPASPASPILEPHEGLUGLU
10   ASPGLUASNPHELEUVALHISLEUSERASN
11   VALLYSVALSERSERGLUALASERGLUASP
12   GLYILELEUGLUALAASNHISVALSERALA
13   LEUALACYSLEUGLYSERPROSERTHRALA
14   THRVALTHRILEPHEASPASPASPHISALA
15   GLYILEPHETHRPHEGLUGLU

Samples:

sample_1: CBD1, [U-100% 13C; U-100% 15N], 0.5 mM; HEPES 20 mM; beta-mercaptoethanol 20 mM; sodium azide 0.02%; EDTA 15 mM; sodium chloride 100 mM; H2O 90%; D2O 10%

sample_conditions_1: ionic strength: 100 mM; pH: 7.0; pressure: 1 atm; temperature: 306 K

Experiments:

NameSampleSample stateSample conditions
3D HNCAsample_1isotropicsample_conditions_1
3D HN(CO)CAsample_1isotropicsample_conditions_1
3D HN(CA)COsample_1isotropicsample_conditions_1
3D HNCOsample_1isotropicsample_conditions_1
3D CBCA(CO)NHsample_1isotropicsample_conditions_1

Software:

TOPSPIN, Bruker Biospin - collection

NMR spectrometers:

  • Bruker Avance 800 MHz

Related Database Links:

PDB
DBJ BAF84385
EMBL CAH91585
GB AAA97928 AAB40148 AAD04173 AAD04174 AAD17213
REF NP_001028033 NP_001106272 NP_001106273 NP_001125933 NP_001164429

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks