BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 15302

Title: a novel lectin-like peptide from Odorrana grahami   PubMed: 18584053

Authors: Li, Jun; Li, Jianxu; Lin, Donghai; Lai, Ren

Citation: Li, Jianxu; Wu, Hongbing; Hong, Jing; Xu, Xueqing; Yang, Hailong; Wu, Bingxian; Wang, Yipeng; Zhu, Jianhua; Lai, Ren; Jiang, Xinguo; Lin, Donghai; Prescott, Mark; Rees, Huw. "Odorranalectin is a small peptide lectin with potential for drug delivery and targeting."  PLoS ONE 3, e2381-e2381 (2008).

Assembly members:
Odorrana, polymer, 17 residues, 1894.231 Da.

Natural source:   Common Name: Yunnanfu frog   Taxonomy ID: 167935   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Odorrana grahami

Experimental source:   Production method: purified from the natural source

Entity Sequences (FASTA):
Odorrana: YASPKCFRYPNGVLACT

Data sets:
Data typeCount
1H chemical shifts107

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1Odorrana1

Entities:

Entity 1, Odorrana 17 residues - 1894.231 Da.

1   TYRALASERPROLYSCYSPHEARGTYRPRO
2   ASNGLYVALLEUALACYSTHR

Samples:

sample_1: Odorrana 2 mM

sample_conditions_1: pressure: 1 atm; temperature: 298.1 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H NOESYsample_1isotropicsample_conditions_1
2D 1H-1H TOCSYsample_1isotropicsample_conditions_1

Software:

SPARKY, Goddard - chemical shift assignment

ARIA, Linge, O, . - structure solution

NMR spectrometers:

  • Varian INOVA 600 MHz

Related Database Links:

BMRB 20001
PDB
GB ABW34702 ADV36145