BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 15140

Title: Proton chemical shifts of mytilin   PubMed: 17628674

Authors: Roch, Philippe; Yang, Yinshan; Aumelas, Andre

Citation: Roch, Philippe; Yang, Yinshan; Toubianaa, Mylene; Aumelas, Andre. "NMR structure of mussel mytilin, and antiviral-antibacterial activities of derived synthetic peptides."  Dev. Comp. Immunol. 32, 227-238 (2007).

Assembly members:
mytilin, polymer, 34 residues, Formula weight is not available

Natural source:   Common Name: Mediterranean mussel   Taxonomy ID: 29158   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Mytilus galloprovincialis

Experimental source:   Production method: chemical synthesis   Host organism: Synthetic

Entity Sequences (FASTA):
mytilin: SCASRCKGHCRARRCGYYVS VLYRGRCYCKCLRC

Data sets:
Data typeCount
1H chemical shifts226

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1Mytilin structure1

Entities:

Entity 1, Mytilin structure 34 residues - Formula weight is not available

1   SERCYSALASERARGCYSLYSGLYHISCYS
2   ARGALAARGARGCYSGLYTYRTYRVALSER
3   VALLEUTYRARGGLYARGCYSTYRCYSLYS
4   CYSLEUARGCYS

Samples:

sample_1: mytilin0.8 – 1.0 mM

sample_conditions_1: ionic strength: . M; pH: 3.3; pressure: 1 atm; temperature: 295 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H COSYsample_1isotropicsample_conditions_1
2D 1H-1H TOCSYsample_1isotropicsample_conditions_1
2D 1H-1H NOESYsample_1isotropicsample_conditions_1

Software:

xwinnmr v3.1, Bruker Biospin - collection, processing

GIFA, Delsuc - data analysis

X-PLOR, Brunger - geometry optimization

NMR spectrometers:

  • Bruker Avance 600 MHz

Related Database Links:

PDB 2EEM
GB AAD45013 AAD52661 AEE60903
SP P81613