BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 15069

Title: Structure-Activity Analysis of Synthetic Quorum-Sensing Signal Peptides from Streptococcus mutans

Authors: Syvitski, R.; Jakeman, D.; Li, Y.

Citation: Syvitski, R.; Tian, X.; Sampara, K.; Salman, A.; Lee, S.; Jakeman, D.; Li, Y.. "Structure-Activity Analysis of Quorum-Sensing Signaling Peptides from Streptococcus mutans"  J. Bacteriol. ., .-..

Assembly members:
signaling_peptide_TCP3, polymer, 19 residues, Formula weight is not available

Natural source:   Common Name: Streptococcus mutans   Taxonomy ID: 1309   Superkingdom: Bacteria   Kingdom: not available   Genus/species: Streptococcus mutans

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
signaling_peptide_TCP3: SGTLSTFFRLFNRSFTQAX

Data sets:
Data typeCount
1H chemical shifts111

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1TCP31

Entities:

Entity 1, TCP3 19 residues - Formula weight is not available

1   SERGLYTHRLEUSERTHRPHEPHEARGLEU
2   PHEASNARGSERPHETHRGLNALANH2

Samples:

sample_1: signaling peptide TCP3, none, 2 mM; TFE, none, 100%

sample_conditions_1: pressure: 1 atm; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
150ms TOCSYsample_1isotropicsample_conditions_1
250ms NOESYsample_1isotropicsample_conditions_1
DOSYsample_1isotropicsample_conditions_1

Software:

X-PLOR v3.1, Brunger A.T. et al. - refinement

xwinnmr v2.6, Bruker - collection

SPARKY v3.1, T Goddard - data analysis

NMR spectrometers:

  • Bruker AVANCE 500 MHz

Related Database Links:

PDB
EMBL CAL29394 CAL29395 CAL29410
GB AAK01544 EMB66053 EMC58679 EMP59990
REF WP_002268639 WP_019805784