BMRB Entry 6607

Title:
1H, 13C and 15N resonance assignments of AT-Rich Interaction Domain (ARID) of Jumonji
Deposition date:
2005-04-25
Original release date:
2007-09-17
Authors:
Kusunoki, Hideki; Hasegawa, Tsukasa; Komatsu, Chieko; Takeuchi, Takashi; Kohno, Toshiyuki
Citation:

Citation: Kusunoki, Hideki; Hasegawa, Tsukasa; Komatsu, Chieko; Takeuchi, Takashi; Kohno, Toshiyuki. "1H, 13C and 15N Resonance Assignments of the AT-Rich Interaction Domain (ARID) of Jumonji"  J. Biomol. NMR 33, 74-74 (2005).
PubMed: 16222563

Assembly members:

Assembly members:
JMJ ARID, polymer, 116 residues, 13547 Da.

Natural source:

Natural source:   Common Name: Mus musculus   Taxonomy ID: 10090   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Mus musculus

Experimental source:

Experimental source:   Production method: recombinant technology

Data sets:
Data typeCount
13C chemical shifts495
15N chemical shifts120
1H chemical shifts800

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1Jumonji1

Entities:

Entity 1, Jumonji 116 residues - 13547 Da.

1   LEUGLYARGARGTRPGLYPROASNVALGLN
2   ARGLEUALACYSILELYSLYSHISLEUARG
3   SERGLNGLYILETHRMETASPGLULEUPRO
4   LEUILEGLYGLYCYSGLULEUASPLEUALA
5   CYSPHEPHEARGLEUILEASNGLUMETGLY
6   GLYMETGLNGLNVALTHRASPLEULYSLYS
7   TRPASNLYSLEUALAASPMETLEUARGILE
8   PROLYSTHRALAGLNASPARGLEUALALYS
9   LEUGLNGLUALATYRCYSGLNTYRLEULEU
10   SERTYRASPSERLEUSERPROGLUGLUHIS
11   ARGARGLEUGLULYSGLUVALLEUMETGLU
12   LYSGLUILELEUGLULYS

Samples:

Sample: JMJ ARID, [U-13C; U-15N], 1 mM; Sodium Phosphate 22.5 mM; DTT 1.8 mM; NaCl 90 mM

sample_condition: pH: 6.4; temperature: 288 K

Experiments:

NameSampleSample stateSample conditions
1H15N HSQCnot availablenot availablenot available
1H13C HSQCnot availablenot availablenot available
HNCOnot availablenot availablenot available
HN(CA)COnot availablenot availablenot available
HNCAnot availablenot availablenot available
HN(CO)CAnot availablenot availablenot available
CBCA(CO)NHnot availablenot availablenot available
HNCACBnot availablenot availablenot available
(H)CC(CO)NHnot availablenot availablenot available
H(CCCO)NHnot availablenot availablenot available
HCCH-TOCSYnot availablenot availablenot available
(HB)CB(CGCD)HDnot availablenot availablenot available
(HB)CB(CGCDCE)HEnot availablenot availablenot available
TOCSYnot availablenot availablenot available
NOESYnot availablenot availablenot available
HNHAnot availablenot availablenot available
HNHBnot availablenot availablenot available
15N-edited NOESY-HSQCnot availablenot availablenot available
13C-edited NOESY-HSQCnot availablenot availablenot available

Software:

NMRPipe -

PIPP -

NMR spectrometers:

  • Bruker AVANCE 500 MHz

Related Database Links:

PDB
DBJ BAA06736 BAC32264 BAE27780 BAE37641 BAF85550
GB AAH03374 AAH46246 AAH52444 AAH60695 AAI15759
REF NP_001191972 NP_001191973 NP_001253969 NP_004964 NP_068678
SP Q62315 Q92833
TPG DAA16223
AlphaFold Q62315 Q92833

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks