BMRB Entry 6413

Title:
FRAGMENT 33-61 OF BOVINE alpha-HEMOGLBIN: THE EFFECT OF C-TERMINAL AMIDATION AND IDENTIFICATION OF THE MINIMAL PORTION WITH ANTIFUNGAL ACTIVITY
Deposition date:
2004-12-06
Original release date:
2005-10-20
Authors:
Machado, Alessandra; Sforca, Mauricio; Miranda, Antonio; Daffre, Sirlei; Spisni, Alberto; Pertinhez, Thelma; Miranda, M. Teresa
Citation:

Citation: Sforca, Mauricio; Machado, Alessandra; Figueredo, Rita; Oyama, Sergio; Silva, Fernanda; Miranda, Antonio; Daffre, Sirlei; Miranda, M.; Spisni, Alberto; Pertinhez, Thelma. "The micelle-bound structure of an antimicrobial peptide derived from the alpha-chain of bovine hemoglobin isolated from the tick Boophilus microplus."  Biochemistry 44, 6440-6451 (2005).
PubMed: 15850378

Assembly members:

Assembly members:
fragment 40-61, polymer, 22 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Cow   Taxonomy ID: 9913   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Bos taurus

Experimental source:

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
fragment 40-61: KTYFPHFDLSHGSAQVKGHG AK

Data sets:
Data typeCount
1H chemical shifts113
coupling constants17

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1fragment 40-611

Entities:

Entity 1, fragment 40-61 22 residues - Formula weight is not available

1   LYSTHRTYRPHEPROHISPHEASPLEUSER
2   HISGLYSERALAGLNVALLYSGLYHISGLY
3   ALALYS

Samples:

sample_1: fragment 40-61 1.0 mM; sodium dodecyl sulfate (SDS) 200 mM

Ex-cond_1: pH: 4.0; temperature: 310 K

Experiments:

NameSampleSample stateSample conditions
1H DQF-COSYnot availablenot availablenot available
NOESYnot availablenot availablenot available
ROESYnot availablenot availablenot available
TOCSYnot availablenot availablenot available

Software:

NMRrpipe_NMRview v5.0 -

NMR spectrometers:

  • Varian Inova 500 MHz

Related Database Links:

BMRB 6048 6360
PDB
EMBL CAB43762 CAB43763 CAB43764 CAB43765 CAB56827
GB AAA52631 AAB22948 AAI02941 AAI33478
PRF 1004268B 1814300B
REF NP_001070890 XP_001788728 XP_003585623 XP_004020743 XP_006050021
SP P01966 P01968 P01969 P04237 P09423
TPG DAA15749
AlphaFold P01968 P01966 P01969 P04237 P09423