BMRB Entry 5819

Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR5819

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Title:
Complete 1H, 15N and 13C assignment of the soluble domain of the ba3 oxidase subunit II of Thermus thermophilus in the reduced state
Deposition date:
2003-06-06
Original release date:
2006-02-01
Authors:
Mukrasch, Marco; Luecke, Christian; Loehr, Frank; Maneg, Oliver; Ludwig, Bernd; Rueterjans, Heinz
Citation:

Citation: Mukrasch, Marco; Luecke, Christian; Loehr, Frank; Maneg, Oliver; Ludwig, Bernd; Rueterjans, Heinz. "Letter to the editor: Complete 1H, 15N, and 13C assignment of the soluble domain of the ba3 oxidase subunit II of Thermus thermophilus in the reduced state "  J. Biomol. NMR 28, 297-298 (2004).
PubMed: 14752263

Assembly members:

Assembly members:
CuA domain, polymer, 136 residues, Formula weight is not available
CU1, non-polymer, 63.546 Da.

Natural source:

Natural source:   Common Name: Thermus thermophilus   Taxonomy ID: 274   Superkingdom: Eubacteria   Kingdom: not available   Genus/species: Thermus thermophilus

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pMA10

Entity Sequences (FASTA):

Entity Sequences (FASTA):
CuA domain: MAYTLATHTAGVIPAGKLER VDPTTVRQEGPWADPAQAVV QTGPNQYTVYVLAFAFGYQP NPIEVPQGAEIVFKITSPDV IHGFHVEGTNINVEVLPGEV STVRYTFKRPGEYRIICNQY CGLGHQNMFGTIVVKE

Data sets:
Data typeCount
1H chemical shifts938
13C chemical shifts572
15N chemical shifts141

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1CuA domain1
2COPPER (I) ION, 12
3COPPER (I) ION, 22

Entities:

Entity 1, CuA domain 136 residues - Formula weight is not available

1   METALATYRTHRLEUALATHRHISTHRALA
2   GLYVALILEPROALAGLYLYSLEUGLUARG
3   VALASPPROTHRTHRVALARGGLNGLUGLY
4   PROTRPALAASPPROALAGLNALAVALVAL
5   GLNTHRGLYPROASNGLNTYRTHRVALTYR
6   VALLEUALAPHEALAPHEGLYTYRGLNPRO
7   ASNPROILEGLUVALPROGLNGLYALAGLU
8   ILEVALPHELYSILETHRSERPROASPVAL
9   ILEHISGLYPHEHISVALGLUGLYTHRASN
10   ILEASNVALGLUVALLEUPROGLYGLUVAL
11   SERTHRVALARGTYRTHRPHELYSARGPRO
12   GLYGLUTYRARGILEILECYSASNGLNTYR
13   CYSGLYLEUGLYHISGLNASNMETPHEGLY
14   THRILEVALVALLYSGLU

Entity 2, COPPER (I) ION, 1 - Cu - 63.546 Da.

1   CU1

Samples:

sample_1: CuA domain, [U-98% 15N], 1.2 mM; potassium phosphate 20 mM; ascorbate 5 mM; Pefabloc 0.1 mM

sample_2: CuA domain, [U-99% 13C; U-98% 15N], 0.9 mM; potassium phosphate 20 mM; ascorbate 10 mM; Pefabloc 0.1 mM

sample_3: CuA domain 2.0 mM; potassium phosphate 20 mM; ascorbate 5 mM

condition_1: pH: 6.0 na; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
1H-1H TOCSYnot availablenot availablecondition_1
1H-1H NOESYnot availablenot availablecondition_1
15N-1H TROSYnot availablenot availablecondition_1
15N-1H TROSY-HNCOnot availablenot availablecondition_1
15N-1H TROSY-HNCACBnot availablenot availablecondition_1
(H)CC(CO)NH-TOCSYnot availablenot availablecondition_1
H(CC)(CO)NH-TOCSYnot availablenot availablecondition_1
(HACA)CO(CA)NHnot availablenot availablecondition_1
(HM)CMC(CM)HMnot availablenot availablecondition_1
CT-13C-HSQCnot availablenot availablecondition_1
13C-1H-TROSY-HCD(CG)CBnot availablenot availablecondition_1
15N-1H HMBCnot availablenot availablecondition_1

Software:

XWINNMR v2.6 - data acquisition, data processing

AURELIA v2.7.5 - data analysis

NMR spectrometers:

  • Bruker DMX 600 MHz

Related Database Links:

BMRB 18081 6965
PDB
DBJ BAD70957
GB AAB00369 AAS81115 AFH38826
REF WP_011173203 WP_014629505 YP_004742 YP_006058612 YP_144400
SP P98052 Q5SJ80
AlphaFold P98052 Q5SJ80

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks